Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq375 82.4 7e-11 >seq375 Length=1023 Score = 82.4 bits (90), Expect = 7e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 6624 CGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGT 6683 ||||||| ||| ||||| ||||| || |||||||| || || || | ||||| Sbjct 804 CGATCATCATCGTCAGCAGCGCGTAGGAGGCGATGTTGAAGGGGACGCCGAGGAACATGT 863 Query 6684 CTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGGCAGA 6743 | | || || |||||||||||||| |||| || | ||||||||||| ||| | | Sbjct 864 CGGCGCTGCGCTGGTAGAGCTGGCAGGAGAGCTTTCCGTCGGCGACGTAGAACTGGAACA 923 Query 6744 GGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796 | | ||||||||| | ||| ||||| |||| ||| || ||||| ||| Sbjct 924 GTGCGTGGCACGGTGCGAGGGCCATGTCCGGGATGTCCGCGGGATTCCAGGCG 976 Score = 82.4 bits (90), Expect = 7e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 34549 CGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCA 34608 ||| ||||| || ||| |||| ||||| ||| | ||||||||| | || | ||| Sbjct 976 CGCCTGGAATCCCGCGGACATCCCGGACATGGCCCTCGCACCGTGCCACGCACTGTTCCA 917 Query 34609 ATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGG 34668 ||||||||||| | || |||| |||||||||||||| || || | |||||| Sbjct 916 GTTCTACGTCGCCGACGGAAAGCTCTCCTGCCAGCTCTACCAGCGCAGCGCCGACATGTT 857 Query 34669 GTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCG 34721 | || || || |||||||| || ||||| ||||| ||| ||||||| Sbjct 856 CCTCGGCGTCCCCTTCAACATCGCCTCCTACGCGCTGCTGACGATGATGATCG 804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447007069165200