Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq375 82.4 7e-11
>seq375
Length=1023
Score = 82.4 bits (90), Expect = 7e-11
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 6624 CGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGT 6683
||||||| ||| ||||| ||||| || |||||||| || || || | |||||
Sbjct 804 CGATCATCATCGTCAGCAGCGCGTAGGAGGCGATGTTGAAGGGGACGCCGAGGAACATGT 863
Query 6684 CTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGGCAGA 6743
| | || || |||||||||||||| |||| || | ||||||||||| ||| | |
Sbjct 864 CGGCGCTGCGCTGGTAGAGCTGGCAGGAGAGCTTTCCGTCGGCGACGTAGAACTGGAACA 923
Query 6744 GGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796
| | ||||||||| | ||| ||||| |||| ||| || ||||| |||
Sbjct 924 GTGCGTGGCACGGTGCGAGGGCCATGTCCGGGATGTCCGCGGGATTCCAGGCG 976
Score = 82.4 bits (90), Expect = 7e-11
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 34549 CGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCA 34608
||| ||||| || ||| |||| ||||| ||| | ||||||||| | || | |||
Sbjct 976 CGCCTGGAATCCCGCGGACATCCCGGACATGGCCCTCGCACCGTGCCACGCACTGTTCCA 917
Query 34609 ATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGG 34668
||||||||||| | || |||| |||||||||||||| || || | ||||||
Sbjct 916 GTTCTACGTCGCCGACGGAAAGCTCTCCTGCCAGCTCTACCAGCGCAGCGCCGACATGTT 857
Query 34669 GTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCG 34721
| || || || |||||||| || ||||| ||||| ||| |||||||
Sbjct 856 CCTCGGCGTCCCCTTCAACATCGCCTCCTACGCGCTGCTGACGATGATGATCG 804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447007069165200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |