Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq44648 98.7 7e-16
seq158136 89.7 4e-13
seq39107 87.8 1e-12
>seq44648
Length=6574
Score = 98.7 bits (108), Expect = 7e-16
Identities = 147/207 (71%), Gaps = 4/207 (2%)
Strand=Plus/Plus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848
|||||| |||||||| || ||||||||||| ||| |||||| | || ||||| || |
Sbjct 5310 AATGCAGATTTTTGTCAAGACTCTTACTGGAAAAACTATTACTTTGGAGGTCGAGAGTTC 5369
Query 27849 CGAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906
||| ||| ||||| || || ||| ||| ||||| || || |||| ||
Sbjct 5370 AGACACGATTGACAAT--GTGAAGGCAAAGATACAGGACAAGGAGGGCATTCCTCCAGAT 5427
Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966
|||||| |||| |||||||| ||||| || | || || | ||| | || | ||||||
Sbjct 5428 CAGCAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGACGTACTCTGGCTGATTAC 5487
Query 27967 AACATCCAAAAAGAGAGCACTTTGCAT 27993
||||| || || ||| |||| | |||
Sbjct 5488 AACATTCAGAAGGAGTCCACTCTTCAT 5514
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| ||||| || || || ||||| || || || |||| || |||||| |
Sbjct 2575 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAAAGCTCT 2634
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || ||||| ||||| || || ||||| || || |||| || |
Sbjct 2635 GACACCATAGACAAT--GTCAAGGCTAAGATTCAAGACAAGGAGGGAATTCCACCAGACC 2692
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| || || | || ||||| ||||| ||| | || |||| || | |||| | |||||||
Sbjct 2693 AACAGAGGCTCATCTTTGCTGGAAAGCAACTTGAAGACGGTCGAACCTTGGCTGATTACA 2752
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| ||| || | || ||||| ||||| | ||||| ||
Sbjct 2753 ACATCCAAAAGGAGTCTACCCTACACTTGGTGCTGCGTCTTCGTGGTGG 2801
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| ||||| || || || ||||| || || || |||| || |||||| |
Sbjct 2803 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAAAGCTCT 2862
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || ||||| ||||| || || ||||| || || |||| || |
Sbjct 2863 GACACCATAGACAAT--GTCAAGGCTAAGATTCAAGACAAGGAGGGAATTCCACCAGACC 2920
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| || || | || ||||| ||||| ||| | || |||| || | |||| | |||||||
Sbjct 2921 AACAGAGGCTCATCTTTGCTGGAAAGCAACTTGAAGACGGTCGAACCTTGGCTGATTACA 2980
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| ||| || | || ||||| ||||| | ||||| ||
Sbjct 2981 ACATCCAAAAGGAGTCTACCCTACACTTGGTGCTGCGTCTTCGTGGTGG 3029
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| ||||| || || || ||||| || || || |||| || |||||| |
Sbjct 3259 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAAAGCTCT 3318
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || ||||| ||||| || || ||||| || || |||| || |
Sbjct 3319 GACACCATAGACAAT--GTCAAGGCTAAGATTCAAGACAAGGAGGGAATTCCACCAGACC 3376
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| || || | || ||||| ||||| ||| | || |||| || | |||| | |||||||
Sbjct 3377 AACAGAGGCTCATCTTTGCTGGAAAGCAACTTGAAGACGGTCGAACCTTGGCTGATTACA 3436
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| ||| || | || ||||| ||||| | ||||| ||
Sbjct 3437 ACATCCAAAAGGAGTCTACCCTACACTTGGTGCTGCGTCTTCGTGGTGG 3485
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| ||||| || || || ||||| || || || |||| || |||||| |
Sbjct 3487 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAAAGCTCT 3546
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || ||||| ||||| || || ||||| || || |||| || |
Sbjct 3547 GACACCATAGACAAT--GTCAAGGCTAAGATTCAAGACAAGGAGGGAATTCCACCAGACC 3604
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| || || | || ||||| ||||| ||| | || |||| || | |||| | |||||||
Sbjct 3605 AACAGAGGCTCATCTTTGCTGGAAAGCAACTTGAAGACGGTCGAACCTTGGCTGATTACA 3664
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| ||| || | || ||||| ||||| | ||||| ||
Sbjct 3665 ACATCCAAAAGGAGTCTACCCTACACTTGGTGCTGCGTCTTCGTGGTGG 3713
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| ||||| || || || ||||| || || || |||| || |||||| |
Sbjct 3715 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAAAGCTCT 3774
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || ||||| ||||| || || ||||| || || |||| || |
Sbjct 3775 GACACCATAGACAAT--GTCAAGGCTAAGATTCAAGACAAGGAGGGAATTCCACCAGACC 3832
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| || || | || ||||| ||||| ||| | || |||| || | |||| | |||||||
Sbjct 3833 AACAGAGGCTCATCTTTGCTGGAAAGCAACTTGAAGACGGTCGAACCTTGGCTGATTACA 3892
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| ||| || | || ||||| ||||| | ||||| ||
Sbjct 3893 ACATCCAAAAGGAGTCTACCCTACACTTGGTGCTGCGTCTTCGTGGTGG 3941
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| ||||| || || || ||||| || || || |||| || |||||| |
Sbjct 4171 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAAAGCTCT 4230
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || ||||| ||||| || || ||||| || || |||| || |
Sbjct 4231 GACACCATAGACAAT--GTCAAGGCTAAGATTCAAGACAAGGAGGGAATTCCACCAGACC 4288
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| || || | || ||||| ||||| ||| | || |||| || | |||| | |||||||
Sbjct 4289 AACAGAGGCTCATCTTTGCTGGAAAGCAACTTGAAGACGGTCGAACCTTGGCTGATTACA 4348
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| ||| || | || ||||| ||||| | ||||| ||
Sbjct 4349 ACATCCAAAAGGAGTCTACCCTACACTTGGTGCTGCGTCTTCGTGGTGG 4397
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| ||||| || || || ||||| || || || |||| || |||||| |
Sbjct 4399 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAAAGCTCT 4458
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || ||||| ||||| || || ||||| || || |||| || |
Sbjct 4459 GACACCATAGACAAT--GTCAAGGCTAAGATTCAAGACAAGGAGGGAATTCCACCAGACC 4516
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| || || | || ||||| ||||| ||| | || |||| || | |||| | |||||||
Sbjct 4517 AACAGAGGCTCATCTTTGCTGGAAAGCAACTTGAAGACGGTCGAACCTTGGCTGATTACA 4576
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| ||| || | || ||||| ||||| | ||||| ||
Sbjct 4577 ACATCCAAAAGGAGTCTACCCTACACTTGGTGCTGCGTCTTCGTGGTGG 4625
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| ||||| || || || ||||| || || || |||| || |||||| |
Sbjct 4627 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAAAGCTCT 4686
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || ||||| ||||| || || ||||| || || |||| || |
Sbjct 4687 GACACCATAGACAAT--GTCAAGGCTAAGATTCAAGACAAGGAGGGAATTCCACCAGACC 4744
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| || || | || ||||| ||||| ||| | || |||| || | |||| | |||||||
Sbjct 4745 AACAGAGGCTCATCTTTGCTGGAAAGCAACTTGAAGACGGTCGAACCTTGGCTGATTACA 4804
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| ||| || | || ||||| ||||| | ||||| ||
Sbjct 4805 ACATCCAAAAGGAGTCTACCCTACACTTGGTGCTGCGTCTTCGTGGTGG 4853
>seq158136
Length=352
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848
||||||||| |||||||| || | || || || || || |||| || |||||| |
Sbjct 20 AATGCAAATCTTTGTGAAGACATTGACGGGAAAGACAATCACTCTTGAAGTGGAAAGCTC 79
Query 27849 CGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906
||| || ||||| ||||| || || |||||||| ||| | || ||
Sbjct 80 TGACACCATTGACAAT--GTCAAGGCTAAGATTCAGGACAAAGAGGGTATCCCACCAGAC 137
Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966
|||||| || | |||||||| |||||||| | || || | || | | | ||||||||
Sbjct 138 CAGCAAAGGCTCATTTTTGCTGGAAAACAGCTTGAGGATGGCCGAACCCTTGCCGATTAC 197
Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||| || |||||| || |||||||||| | ||| | ||||| ||
Sbjct 198 AACATTCAGAAAGAGTCTACCCTGCATTTGGTGCTTCGTCTCCGTGGTGG 247
>seq39107
Length=55737
Score = 87.8 bits (96), Expect = 1e-12
Identities = 151/215 (70%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||||||||| || ||||| || || ||| |||||| | || || ||||| |
Sbjct 16779 ATGCAAATTTTTGTCAAGACTCTGACGGGAAAAACTATTACTTTGGAGGTTGAAAGTTCT 16838
Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
| || || ||||| || || ||| ||| |||||||| ||| |||| || |
Sbjct 16839 GATACCATTGACAAT--GTAAAGGCAAAGATACAGGACAAAGAGGGTATTCCACCAGACC 16896
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCA-GCTTGTCCGATTAC 27966
||||| || | || ||||| || || || |||| || | || | |||| | |||||
Sbjct 16897 AGCAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGTACACTTG-CTGATTAT 16955
Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001
|||||||| || || |||| | |||||||| ||
Sbjct 16956 AACATCCAGAAGGAATCCACTCTTCATTTGGTGTT 16990
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||||||||| || ||||| || || ||| |||||| | || || ||||| |
Sbjct 26553 ATGCAAATTTTTGTCAAGACTCTGACGGGAAAAACTATTACTTTGGAGGTTGAAAGTTCT 26612
Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
| || || ||||| || || ||| ||| |||||||| ||| |||| || |
Sbjct 26613 GATACCATTGACAAT--GTAAAGGCAAAGATACAGGACAAAGAGGGTATTCCACCAGACC 26670
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
||||| || | || ||||| || || || |||| || | || | | | | ||||| |
Sbjct 26671 AGCAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGAACCCTTGCTGATTATA 26730
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||| || || ||| |||| |||| ||| | | ||||| ||
Sbjct 26731 ACATCCAGAAGGAATCTACTCTGCACCTGGTGTTGAGGCTTCGTGGTGG 26779
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||||||||| || ||||| || || ||| |||||| | || || ||||| |
Sbjct 41390 ATGCAAATTTTTGTCAAGACTCTGACGGGAAAAACTATTACTTTGGAGGTTGAAAGTTCT 41449
Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
| || || ||||| || || ||| ||| |||||||| ||| |||| || |
Sbjct 41450 GATACCATTGACAAT--GTAAAGGCAAAGATACAGGACAAAGAGGGTATTCCACCAGACC 41507
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
||||| || | || ||||| || || || |||| || | || | | | | ||||| |
Sbjct 41508 AGCAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGAACCCTTGCTGATTATA 41567
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||| || || ||| |||| |||| ||| | | ||||| ||
Sbjct 41568 ACATCCAGAAGGAATCTACTCTGCACCTGGTGTTGAGGCTTCGTGGTGG 41616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354890743850445
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