Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq39107 84.2 2e-11 >seq39107 Length=55737 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101024 CTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAA 101083 || || |||| ||||| || |||||||| || || |||||||| || | ||| | | Sbjct 43985 CTCAAAACCAGGTGCAGGGTAGATTCTTTCTGGATGTTGTAATCCGCAAGGGTTCTTCCA 43926 Query 101084 TCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTG 101143 ||||| | ||||| || ||| | |||||||| || || ||| ||| | || || || Sbjct 43925 TCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGGATACCCTCCTTA 43866 Query 101144 TCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATA 101203 || ||| ||| |||||||| | | | || |||| | ||| | || || Sbjct 43865 TCCTGAATCTTTGCTTTCACATTGTCAATTGTATCTGAACTCTCCACTTCCAAAGTTATG 43806 Query 101204 GTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || || || ||||| || || | ||||||||||||| Sbjct 43805 GTCTTTCCTGTCAACGTCTTTACAAAAATTTGCATT 43770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408542251270065