Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq375 102 7e-17 >seq375 Length=1023 Score = 102 bits (112), Expect = 7e-17 Identities = 137/189 (72%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 29732 ATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTC- 29790 ||||| ||| || || | |||| ||||||||| ||||| || ||||| |||||| Sbjct 806 ATCATCATCGTCAGCAGCGCGTAGGAGGCGATGTTGAAGGGGACGCCGAGGAACATGTCG 865 Query 29791 -CCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACA 29849 | ||| | ||||||||||||||| ||||||| ||||||| ||||| ||||| ||| Sbjct 866 GCGCTG--CGCTGGTAGAGCTGGCAGGAGAGCTTTCCGTCGGCGACGTAGAACTGGAACA 923 Query 29850 TGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGCACACACGA 29909 || |||||||| | ||||||||| | ||| ||| |||||||| | |||| Sbjct 924 GTGCGTGGCACGGTGCGAGGGCCATGTCCGGGATGTCCGCGGGATTCCAGGCGGAGACGA 983 Query 29910 TGATGCGCC 29918 | ||||| Sbjct 984 GCAGGCGCC 992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405054201210010