Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_030696.1 Length=93139 Score E Sequences producing significant alignments: (Bits) Value seq21506 131 1e-25 >seq21506 Length=5703 Score = 131 bits (144), Expect = 1e-25 Identities = 164/220 (75%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 71962 GGAAATCTGACCGCCGATCCCGAACTGCGCTTCACCCCCT-CGGGCGCGCCGGTCGCCAA 72020 || || || |||||||| ||||| ||||||| ||| | ||||| |||||| || || Sbjct 5335 GGCAACCTCACCGCCGACCCCGAGCTGCGCTACACGCAGAACGGGCT-GCCGGTGGCGAA 5277 Query 72021 CTTCACCGTCGCAAGCACCCCGCGGTACTTCGACAA-GCAGTCCAACGAGTGGAAGGACG 72079 ||||||| ||||| || || || |||||||| || | | |||||||||||||||| Sbjct 5276 CTTCACCATCGCATCGACGCCTCGCAACTTCGACCGTGCCG-CGAACGAGTGGAAGGACG 5218 Query 72080 CCGAGGCGCTCTTCCTGCGCTGCAACATCTGGCGCGAGCCGGCCGAGAACGTCACCGAGT 72139 ||| ||||| ||||| ||| | | ||||| ||| |||||| |||| | | | Sbjct 5217 GCGAAGCGCTGTTCCTCCGCGCCTCGGTGTGGCGTGAGTTCGCCGAGCACGTGGCGGGCT 5158 Query 72140 CGCTGTCCAAGGGCATGCGCGTCATCGTCCAGGGTCGCCT 72179 |||| |||||||||||||||| |||| |||||||| || Sbjct 5157 CGCTCACCAAGGGCATGCGCGTGATCGCGCAGGGTCGTCT 5118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 297106551318500