Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq21506 132 3e-26 seq65714 131 1e-25 >seq21506 Length=5703 Score = 132 bits (146), Expect = 3e-26 Identities = 161/214 (75%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 69654 GGTAACCTGACCGCCGACCCCGAACTCCGGTTCACGCCCTCCGGTGCCGC-GGTCGCGAA 69712 || ||||| |||||||||||||| || || | ||||| ||| || || ||| ||||| Sbjct 5335 GGCAACCTCACCGCCGACCCCGAGCTGCGCTACACGCAGAACGG-GCTGCCGGTGGCGAA 5277 Query 69713 CTTCACCGTCGCGTCGACCCCGCGGTACTTCGACAA-GCAGTCGAACGAGTGGAAGGATG 69771 ||||||| |||| ||||| || || |||||||| || | |||||||||||||||| | Sbjct 5276 CTTCACCATCGCATCGACGCCTCGCAACTTCGACCGTGCCG-CGAACGAGTGGAAGGACG 5218 Query 69772 CCGAGGCACTCTTCCTGCGCTGCAACGTCTGGCGCGAGTACGCCGAGAACGTGACTGAGT 69831 ||| || || ||||| ||| | || ||||| |||| ||||||| ||||| | | | Sbjct 5217 GCGAAGCGCTGTTCCTCCGCGCCTCGGTGTGGCGTGAGTTCGCCGAGCACGTGGCGGGCT 5158 Query 69832 CGCTCCAGAAGGGCGCCCGCGTCATCGTCCAGGG 69865 ||||| |||||| ||||| |||| ||||| Sbjct 5157 CGCTCACCAAGGGCATGCGCGTGATCGCGCAGGG 5124 >seq65714 Length=2341 Score = 131 bits (144), Expect = 1e-25 Identities = 119/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 78283 CAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGACATCCCATCCTGGGACACCCT 78342 |||||||||| |||| |||||||| ||| |||| |||||| | | || ||| |||| || Sbjct 150 CAACTTCTGGCTGCCGGAGAAGGTGCCGCTGTCGAACGACGTGCAGTCGTGGAACACGCT 91 Query 78343 TACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACCGGCCTCACCCTGCTCGACAC 78402 || || || ||| || ||||| ||||| ||||||||||| ||||| || |||||||| Sbjct 90 CACCCCCGACGAGCAGCTGCTCACCATGCGGGTGTTCACCGGGCTCACGCTCCTCGACAC 31 Query 78403 CATCCAGGGCACAGTTGGCGCCATCTCGCT 78432 ||||||||||| || ||||| | ||||| Sbjct 30 GATCCAGGGCACCGTCGGCGCGGTGTCGCT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 298504324352630