Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_030927.1 Length=45858 Score E Sequences producing significant alignments: (Bits) Value seq21506 143 8e-30 >seq21506 Length=5703 Score = 143 bits (158), Expect = 8e-30 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 36201 GGCAACCTGACAGCCGATCCGGAACTGCGGTTCACTCCGTCCGGCGCGGCGGTCGCGAAC 36260 |||||||| || ||||| || || ||||| | ||| | | ||| | |||| |||||| Sbjct 5335 GGCAACCTCACCGCCGACCCCGAGCTGCGCTACACGCAGAACGGGCTGCCGGTGGCGAAC 5276 Query 36261 TTCACGGTCGCTTCGACTCCGCGACAGTTCGACCGGGACGCGAACGAGTGGAAGGACGGC 36320 ||||| |||| ||||| || || | |||||||| | |||||||||||||||||||||| Sbjct 5275 TTCACCATCGCATCGACGCCTCGCAACTTCGACCGTGCCGCGAACGAGTGGAAGGACGGC 5216 Query 36321 GATCCGCTGTTCATGCGCTGCAACCTGTGGCGTGACGCGGCGGAGAACGTCACGGACTCG 36380 || |||||||| | ||| | |||||||||| || ||| |||| ||| |||| Sbjct 5215 GAAGCGCTGTTCCTCCGCGCCTCGGTGTGGCGTGAGTTCGCCGAGCACGTGGCGGGCTCG 5156 Query 36381 CTGTCGAAGGGGACTCGGGTCATCGTGCAGGGCCGGCTGAAACAGCG 36427 || | ||||| | || || |||| |||||| || ||| ||||| Sbjct 5155 CTCACCAAGGGCATGCGCGTGATCGCGCAGGGTCGTCTGCGCCAGCG 5109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146233919219400