Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_030936.1 Length=93843 Score E Sequences producing significant alignments: (Bits) Value seq21506 136 2e-27 >seq21506 Length=5703 Score = 136 bits (150), Expect = 2e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 72328 GGAAACCTGACCGCCGATCCCGAACTGCGCTTCACCCCCTCGGGTGCGCCGGTCGCCAAC 72387 || ||||| |||||||| ||||| ||||||| ||| | || |||||| || ||| Sbjct 5335 GGCAACCTCACCGCCGACCCCGAGCTGCGCTACACGCAGAACGGGCTGCCGGTGGCGAAC 5276 Query 72388 TTCACCGTCGCAAGCACCCCCCGGTACTTCGACAA-GCAGAGCAACGAGTGGAAGGACGC 72446 |||||| ||||| || || || |||||||| || | | |||||||||||||||| Sbjct 5275 TTCACCATCGCATCGACGCCTCGCAACTTCGACCGTGCCGCG-AACGAGTGGAAGGACGG 5217 Query 72447 CGAGGCGCTCTTCCTGCGCTGCAACATCTGGCGCGAGCCGGCCGAGAACGTCGCCGAGTC 72506 ||| ||||| ||||| ||| | | ||||| ||| |||||| |||| || | || Sbjct 5216 CGAAGCGCTGTTCCTCCGCGCCTCGGTGTGGCGTGAGTTCGCCGAGCACGTGGCGGGCTC 5157 Query 72507 GCTGACCAAGGGCATGCGCGTCATCGTCCAGGGACGCCT 72545 ||| ||||||||||||||||| |||| ||||| || || Sbjct 5156 GCTCACCAAGGGCATGCGCGTGATCGCGCAGGGTCGTCT 5118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299353200213540