Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq15189 113 6e-20
seq88322 104 3e-17
>seq15189
Length=5727
Score = 113 bits (124), Expect = 6e-20
Identities = 127/170 (75%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 77898 TCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCA 77957
|||||||| || ||||| || || |||||||| || |||||| |||| |||| ||
Sbjct 2542 TCTCTTTCGTACTGAGTGTACAGTTTCTCAAATTCTTCACCCCAACAATCAGCCAAACCC 2483
Query 77958 GGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAG 78017
|| |||||| ||||| | ||| ||||| | |||| || ||||| || |||||||
Sbjct 2482 GGAGCTTCATTGGGGCAAAACAAAGACCATTGCCCATTGCTCTGAACTCTTTCCATAAAG 2423
Query 78018 AGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067
|||||||| | ||| |||||| ||| |||||||| | | |||||| ||
Sbjct 2422 AGATCAGGCACCCAAAGAGCATAAAACAGATCTCGCGCACGATGTTCCTC 2373
Score = 86.0 bits (94), Expect = 9e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458
||||| ||||| || | || ||||||||||| || ||||| || ||| | || | |
Sbjct 1728 GTTCCCGCATTGAAAAGAGTTGGAGATGCATGAGTGAACCACCGTTGAGACATCAGGTGG 1669
Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518
|| |||| | ||| || || ||||| | ||||||||| || || || | |||||||
Sbjct 1668 TAAGTTTTGACAGCAGAGTCAATGTCTTCCTTATGAATTCCAACAGCAACCCTCATCAAC 1609
Query 78519 ATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAA 78578
|| || || |||||||| || |||| | | || || | ||| || | | |
Sbjct 1608 ATGTGTTGTGGTCTTTCCACAACCTTACCTTGAACCTTTAAGAGGTAGGACCTCTTAAGG 1549
Query 78579 GTTTTAAAACCAAAATA 78595
||||| |||||||||||
Sbjct 1548 GTTTTGAAACCAAAATA 1532
>seq88322
Length=2502
Score = 104 bits (114), Expect = 3e-17
Identities = 125/170 (74%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 77898 TCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCA 77957
|||||||||||| || ||| ||| |||||||| | |||||| ||| |||| ||
Sbjct 2078 TCTCTTTCATATCGATGATAAAGCTCCTCAAATTCCTGACCCCAACAATCTGCCAAACCT 2019
Query 77958 GGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAG 78017
| |||||| ||||| | ||| ||||| | |||| || ||||| || |||||||
Sbjct 2018 CGTGCTTCATTGGGGCAAAACAAAGACCATTGTCCATTACTCTGAACTCTTTCCATAAAG 1959
Query 78018 AGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067
|||||||| | ||| |||||| ||| |||||||| | | |||||| ||
Sbjct 1958 AGATCAGGCACCCAAAGAGCATAAAACAGATCTCGCGCACGATGTTCCTC 1909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 692723423442400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |