Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq375 131 1e-25 >seq375 Length=1023 Score = 131 bits (144), Expect = 1e-25 Identities = 142/186 (76%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 1151 CCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCGGTGACCTCAGCGACATGGCA 1210 || |||||||| || | || ||||| ||||| || ||| || |||||||| Sbjct 1002 CCCGACTCGCGGCGCCTGCTCGTCTCCGCCTGGAATCCCGCGGACATCCCGGACATGGCC 943 Query 1211 CTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACGGCCGGCTCTCGCTGC-A 1269 || ||||||||| |||||||| | ||||||| |||||| |||||| |||| | Sbjct 942 CTCGCACCGTGCCACGCACTGTTCCAGTTCTACGTCGCCGACGGAAAGCTCTC-CTGCCA 884 Query 1270 GGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGC 1329 | |||||||||||||||| |||||||||||||| || || ||||| |||||||| ||||| Sbjct 883 GCTCTACCAGCGCAGCGCCGACATGTTCCTCGGCGTCCCCTTCAACATCGCCTCCTACGC 824 Query 1330 GCTCCT 1335 ||| || Sbjct 823 GCTGCT 818 Score = 109 bits (120), Expect = 3e-19 Identities = 146/197 (74%), Gaps = 7/197 (4%) Strand=Plus/Minus Query 1385 TGGACCGGCGGCGACTGCCACATCTACAACAACCACGTCGACCAGGCGCTGATGCAGCTC 1444 ||||||||||| ||||||||| ||||| ||||||||||||| |||| || ||||||| Sbjct 701 TGGACCGGCGGGGACTGCCACGTCTACGACAACCACGTCGAGCAGGTGCGCGAGCAGCTC 642 Query 1445 CGCCGACGACCGCGGCCC-TACCCGAGGCTCGTGCTACACCACGC-GCCG---TCGATCT 1499 ||| || | ||| ||||||| ||| | ||| | | | |||| ||||||| Sbjct 641 ACGCGA-GAGGCCTACCCGTACCCGACGCT-GCGCTTCGCGCGGAAGCCGGAGTCGATCT 584 Query 1500 TCGACTACCGGTACGAGCACATCCACCTCGTGAACTACGACCCGCACCCGTCGATCAAGG 1559 |||||||||||| |||| || || | ||| | ||||| | | ||| | |||||| || Sbjct 583 TCGACTACCGGTTCGAGGACTTCGTCGTCGAGGACTACCAGCACCACGCACCGATCAGGG 524 Query 1560 CGCCGGTGGCCGTCTGA 1576 || ||||||| || ||| Sbjct 523 CGGCGGTGGCGGTATGA 507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295322635505535