Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_031235.1
Length=194437
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 250 3e-61
seq95291 205 1e-47
seq221580 102 1e-16
seq55772 100 4e-16
seq152218 93.3 5e-14
seq32149 93.3 5e-14
seq78999 91.5 2e-13
>seq80997
Length=4773
Score = 250 bits (276), Expect = 3e-61
Identities = 321/440 (73%), Gaps = 2/440 (0%)
Strand=Plus/Plus
Query 183195 CTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACT 183254
|||||| | ||||| |||||||| | || || || || | || |||||||| |
Sbjct 4335 CTTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTT 4394
Query 183255 GATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTC 183313
||||||||| ||| | ||| | ||||| |||| || || | || || ||||||| |
Sbjct 4395 GATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCC 4453
Query 183314 CTCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACA 183373
|||| || || || || || || || || || ||| |||| || || | ||||||||||
Sbjct 4454 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACA 4513
Query 183374 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCA 183433
| ||||| |||||||| || ||||| |||| || || || | || || ||||| |
Sbjct 4514 ATATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGA 4573
Query 183434 TCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAG 183493
||||||||||||| || | ||||||||| | || ||||| |||||||| |||| | |
Sbjct 4574 TCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTG 4633
Query 183494 TCTTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACC 183553
| | |||||| | |||| || |||||||||||||||||||||||| | || |
Sbjct 4634 TTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTC 4693
Query 183554 GTCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCG 183613
|||| ||||||||||||||||| |||||| ||| || | ||||| || || ||
Sbjct 4694 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACTA 4753
Query 183614 CTGTCTTCCTGGTCTATCCT 183633
|||| ||| || ||||||||
Sbjct 4754 CTGTTTTCTTGATCTATCCT 4773
>seq95291
Length=6073
Score = 205 bits (226), Expect = 1e-47
Identities = 284/395 (72%), Gaps = 2/395 (1%)
Strand=Plus/Minus
Query 183195 CTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACT 183254
|||||| | ||||| |||| || | || || || || | || ||||||| |
Sbjct 6062 CTTCTGTAATTGGATAACCAACATCGAAAATCGTCTTTACATTGGATGGTTTGATGTTTT 6003
Query 183255 GATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTC 183313
||||||||| ||| | ||| | |||| |||| || || | || || ||||||| |
Sbjct 6002 GATGATTCCTACTTTATTGACTGCAAAT-TCTGTATTTATTATCGCTTTTATCGCTGCCC 5944
Query 183314 CTCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACA 183373
|||| || || || || || || || || | ||| |||| || || | ||||||||||
Sbjct 5943 CTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATCTCTACTTTATGGAAACA 5884
Query 183374 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCA 183433
| ||||| | |||||| || ||||| |||| || || || | || || ||||| |
Sbjct 5883 ATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGA 5824
Query 183434 TCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAG 183493
||||||||||||| || | ||||||||| | || ||||| |||||||| |||| | |
Sbjct 5823 TCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTG 5764
Query 183494 TCTTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACC 183553
| | |||||| | |||| || |||||||||||||||||||||||| | || |
Sbjct 5763 TTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTC 5704
Query 183554 GTCTCGGTATGCGTCCTTGGATCTGTGTTGCTTAT 183588
|||| ||||||||||||||||| |||||| |||
Sbjct 5703 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATAT 5669
>seq221580
Length=2368
Score = 102 bits (112), Expect = 1e-16
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 171000 TATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTGAACTATTCGTGTCGTGCTGGT 171059
|| ||||| ||| | |||||||| || ||||| || | || || || | |||||
Sbjct 1585 TACATTCTGGATTCAGCTGAAGAGGCTGGATTGGAACTACCATACTCATGCAGAGCTGGA 1644
Query 171060 GCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCTGTTGATCAATCCGATCAATCT 171119
|| || || || |||||||| | | | || ||| |||| ||||| || |||||||||
Sbjct 1645 GCATGCTCTACTTGTGCTGGAAGACTGGATTCAGGTGCTGTGGATCAGTCAGATCAATCT 1704
Query 171120 TTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTGACCTGCGTCTCATATCCTACA 171179
|| ||||| || | ||||| || ||||| | |||| || || |||||||| || |||
Sbjct 1705 TTTCTTGAAGAACAGCAGATAGAGAAAGGTTACCTTCTCACATGTGTCTCATACCCGACA 1764
Query 171180 AGTGATTGTGTAAT 171193
|||||||| ||
Sbjct 1765 TCAGATTGTGTGAT 1778
>seq55772
Length=6464
Score = 100 bits (110), Expect = 4e-16
Identities = 153/217 (71%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 171000 TATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTGAACTATTCGTGTCGTGCTGGT 171059
|| ||||| ||||| || || || || ||| |||| | || ||||| || || ||
Sbjct 1368 TACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGCGCCGGA 1309
Query 171060 GCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCTGTTGATCAATCCGATCAATCT 171119
|| || || |||||||||||||| |||| |||||| || ||||| || ||| ||
Sbjct 1308 GCATGCTCTACCTGTGCTGGGAAGATTGTTTCTGGTTCAGTGGATCAGTCTGATGGCTCA 1249
Query 171120 TTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTGACCTGCGTCTCATATCCTACA 171179
||||||||||| || || | | ||| || | || ||||| ||||| ||||| ||
Sbjct 1248 TTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCCTATCCAACT 1189
Query 171180 AGTGATTGTGTAATCTTGACTGAACAGGAA-GAGAAC 171215
||||||||||| ||| | ||||| ||||||
Sbjct 1188 GCAGATTGTGTAATTGAAACTCACAAGGAAGGAGAAC 1152
Score = 95.1 bits (104), Expect = 2e-14
Identities = 152/217 (70%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 171000 TATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTGAACTATTCGTGTCGTGCTGGT 171059
|| ||||| ||||| || || || || ||| |||| | || ||||| || || ||
Sbjct 3836 TACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGCGCCGGA 3777
Query 171060 GCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCTGTTGATCAATCCGATCAATCT 171119
|| || || |||||||||||||| |||| |||||| | ||||| || ||| ||
Sbjct 3776 GCATGCTCTACCTGTGCTGGGAAGATTGTATCTGGTTCATTGGATCAGTCTGATGGCTCA 3717
Query 171120 TTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTGACCTGCGTCTCATATCCTACA 171179
||||||||||| || || | | ||| || | || ||||| ||||| ||||| ||
Sbjct 3716 TTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCCTATCCAACT 3657
Query 171180 AGTGATTGTGTAATCTTGACTGAACAGGAA-GAGAAC 171215
||||||||||| ||| | ||||| ||||||
Sbjct 3656 GCAGATTGTGTAATTGAAACTCACAAGGAAGGAGAAC 3620
>seq152218
Length=324
Score = 93.3 bits (102), Expect = 5e-14
Identities = 126/173 (73%), Gaps = 2/173 (1%)
Strand=Plus/Minus
Query 170995 ATCAATATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTGAACTATTCGTGTCGTG 171054
|| |||| |||||||||||||| ||||| ||| ||||| | ||| || || | |
Sbjct 282 ATGAATACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGCAGGG 223
Query 171055 CTGGTGCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCTGTTGATCAATCCGATC 171114
|||||||||| || ||||| |||| ||| ||| |||||| | || || || || || |
Sbjct 222 CTGGTGCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCAGA-C 164
Query 171115 AATCT-TTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTGACCTGCGT 171166
||| ||||||||||| || || || | ||| || |||| ||||||||
Sbjct 163 AATAGCTTCCTTGATGACGACCAAATCGGTCTAGGATTTGTTCTCACCTGCGT 111
>seq32149
Length=26709
Score = 93.3 bits (102), Expect = 5e-14
Identities = 126/173 (73%), Gaps = 2/173 (1%)
Strand=Plus/Minus
Query 170995 ATCAATATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTGAACTATTCGTGTCGTG 171054
|| |||| |||||||||||||| ||||| ||| ||||| | ||| || || | |
Sbjct 21043 ATGAATACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGCAGGG 20984
Query 171055 CTGGTGCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCTGTTGATCAATCCGATC 171114
|||||||||| || ||||| |||| ||| ||| |||||| | || || || || || |
Sbjct 20983 CTGGTGCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCAGA-C 20925
Query 171115 AATCT-TTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTGACCTGCGT 171166
||| ||||||||||| || || || | ||| || |||| ||||||||
Sbjct 20924 AATAGCTTCCTTGATGACGACCAAATCGGTCTAGGATTTGTTCTCACCTGCGT 20872
>seq78999
Length=659
Score = 91.5 bits (100), Expect = 2e-13
Identities = 203/302 (67%), Gaps = 2/302 (1%)
Strand=Plus/Minus
Query 186672 TTCTGGTCACAGATCTTCGGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTTCATG 186731
|| |||||| | ||||| |||| || |||||| ||||| | | || || |||
Sbjct 315 TTTTGGTCATAAATCTTTAAGGTTGCTTTCTTCAATAAATGTTGGTTACGTT-CTGTATG 257
Query 186732 CTCTTTGTTCCTGTTATGGGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGCTCTT 186791
| ||||| || || | ||| | ||| | | | |||| | || || | || ||
Sbjct 256 TTATTTGTACCAGTAACTGGTTTACGGATCATTACTTTTGGGGTAGTTAGTTTGGCCCTA 197
Query 186792 AACCTTCGTGCTTATGACTTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGAGTTC 186851
||||| ||||||||||||||||| | | || | | | |||||| |||||| | ||
Sbjct 196 AACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGATCCTTA-TTT 138
Query 186852 GAGACGTTCTATACCAAGAATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGCACCA 186911
||||| ||||| ||||| | ||| | || || |||||| | |||| ||||||| |
Sbjct 137 GAGACTTTCTACACCAAAAGTATTTTCTTAAACGAAGGTATTCGTGGGTGGATGGGAGTT 78
Query 186912 GTGGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAACGCT 186971
||| | | ||||||||| || |||| || |||| || | ||| || ||| ||
Sbjct 77 CAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACCACATGGAAACACT 18
Query 186972 CT 186973
||
Sbjct 17 CT 16
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620328330724200
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