Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_031935.1
Length=186386
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 264 1e-65
seq95291 246 4e-60
seq13836 127 2e-24
seq78999 107 2e-18
seq55772 104 3e-17
seq221580 102 1e-16
seq76780 84.2 3e-11
>seq80997
Length=4773
Score = 264 bits (292), Expect = 1e-65
Identities = 327/441 (74%), Gaps = 6/441 (1%)
Strand=Plus/Plus
Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657
|||||||| ||| ||||| |||| | |||||||| || | || ||||| ||||| ||
Sbjct 4336 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4395
Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716
||||| ||||| | | |||| || ||||| || || ||||||| ||||||| ||
Sbjct 4396 ATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 4454
Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776
||| || || || || || || ||||| || || |||| || || | ||||| |||||
Sbjct 4455 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4514
Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836
|||||||||||||| || ||||| ||||| ||||| ||| | || || ||||| ||
Sbjct 4515 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4574
Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTAT 177896
|||||||||||||||| | ||||||||| | ||||| || ||||||| |||| || |
Sbjct 4575 CTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4634
Query 177897 CTTCCACTTCCTGATCG--GTATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTAC 177954
| |||||| | | | ||| || ||| |||||||||||||||||||||||| ||
Sbjct 4635 TCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGTCGTGAGTGGGAACTTAGTTTT 4692
Query 177955 CGCCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCT 178014
|| || ||||||||||| ||||| ||| ||||| | |||| || | || || ||
Sbjct 4693 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACT 4752
Query 178015 GCTGTATTCCTTGTTTATCCT 178035
|||| ||| | | ||||||
Sbjct 4753 ACTGTTTTCTTGATCTATCCT 4773
>seq95291
Length=6073
Score = 246 bits (272), Expect = 4e-60
Identities = 306/413 (74%), Gaps = 6/413 (1%)
Strand=Plus/Minus
Query 177589 TGGGAACAATTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTC 177648
|||| || |||||||| ||| ||||| || | | |||||||| || | || |||||
Sbjct 6070 TGGGGTCACTTCTGTAATTGGATAACCAACATCGAAAATCGTCTTTACATTGGATGGTTT 6011
Query 177649 GGTGTCCTGATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGT 177707
| ||| ||||||| ||||| | | |||| | ||||| || || ||||||| |
Sbjct 6010 GATGTTTTGATGATTCCTACTTTATTGACTGCAAAT-TCTGTATTTATTATCGCTTTTAT 5952
Query 177708 CGCTGCTCCTCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTA 177767
|||||| ||||| || || || || || || ||||| | || |||| || || | ||
Sbjct 5951 CGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATCTCTACTTTA 5892
Query 177768 TGGCAACAACATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTT 177827
||| ||||| ||||||| |||||| || ||||| ||||| ||||| ||| | || ||
Sbjct 5891 TGGAAACAATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTT 5832
Query 177828 CTATCCCATCTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCA 177887
||||| |||||||||||||||||| | ||||||||| | ||||| || ||||||| |
Sbjct 5831 TTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGA 5772
Query 177888 ACTCGTTATCTTCCACTTCCTGATCGGTAT--CTATGCATACATGGGTCGTGAGTGGGAA 177945
||| || | | |||||| | | ||| | || ||| |||||||||||||||||||||
Sbjct 5771 ACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGTCGTGAGTGGGAA 5714
Query 177946 CTTTCTTACCGCCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCC 177998
||| || || || ||||||||||| ||||| ||| ||||| || |||||
Sbjct 5713 CTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCC 5661
>seq13836
Length=10167
Score = 127 bits (140), Expect = 2e-24
Identities = 145/192 (76%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 179118 GGGGGACTATGGCCTTTTGTGGCGCTCCACGGTGCCTTCGCTCTCATAGGTTTCATGCTT 179177
|| || || ||| ||||||| || ||||||||||| |||| | ||||| |||||| |
Sbjct 4470 GGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTTCATGTTA 4529
Query 179178 CGGCAGTTTGAAATCGCACG-TCTAGTCGGTATTCGTCCTTACAATGCAATCGCGTTTTC 179236
|| || |||||| | || || ||| || | | || ||||| ||||||| ||| || ||
Sbjct 4530 CGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAACCGCATTCTC 4588
Query 179237 TGGTCCAATTGCTGTCTTTGTGTCTGTTTTTCTCATGTATCCTCTCGGACAGTCCTCGTG 179296
|||||||||||||| ||||| | ||| || || || ||||| || || ||||| ||
Sbjct 4589 AGGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGTCTGGTTG 4648
Query 179297 GTTCTTTGCGCC 179308
||||||||| ||
Sbjct 4649 GTTCTTTGCTCC 4660
>seq78999
Length=659
Score = 107 bits (118), Expect = 2e-18
Identities = 210/308 (68%), Gaps = 2/308 (1%)
Strand=Plus/Minus
Query 179544 AACCGTTTCTGGTCTCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTC 179603
|| || || ||||| | |||||| | || ||| |||||| ||||| ||| || |
Sbjct 321 AATCGCTTTTGGTCATAAATCTTTAAGGTTGCTTTCTTCAATAAATGTTGGTTACGTT-C 263
Query 179604 TTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATTATTGGTCTT 179663
| |||||| ||||| || || | ||| | ||| | || |||| | || || |
Sbjct 262 TGTATGTTATTTGTACCAGTAACTGGTTTACGGATCATTACTTTTGGGGTAGTTAGTTTG 203
Query 179664 GCACTTAACCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCT 179723
|| || ||||| | ||||||||||||||||| |||| || | | ||||| ||||||
Sbjct 202 GCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGATCCT 143
Query 179724 GAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATG 179783
| || ||||| ||||| ||||| | || | || || |||||| | |||| ||||||
Sbjct 142 TA-TTTGAGACTTTCTACACCAAAAGTATTTTCTTAAACGAAGGTATTCGTGGGTGGATG 84
Query 179784 GCACCAGTCGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAGGC 179843
| | ||| | | ||||||||| || |||| || |||| || | ||| ||
Sbjct 83 GGAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACCACATGGA 24
Query 179844 AACGCTCT 179851
||| ||||
Sbjct 23 AACACTCT 16
>seq55772
Length=6464
Score = 104 bits (114), Expect = 3e-17
Identities = 158/225 (70%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 176172 TATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCAACTACTCGTGCCGCGCTGGT 176231
|| ||||| ||||| || ||||| || ||||||||||| |||||||||||||| ||
Sbjct 1368 TACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGCGCCGGA 1309
Query 176232 GCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGGTAGATCAAAGCGATCAATCG 176291
|| || || | ||||| || || | | || || | || ||||| ||| ||
Sbjct 1308 GCATGCTCTACCTGTGCTGGGAAGATTGTTTCTGGTTCAGTGGATCAGTCTGATGGCTCA 1249
Query 176292 TTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGACTTGTGTTTCATATCCTACG 176351
||||||||||| ||| || | | ||| || | || || ||||| || ||||| ||
Sbjct 1248 TTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCCTATCCAACT 1189
Query 176352 AGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACTTTATTGA 176396
|||||||| ||||| ||| | || |||| ||||| || |||
Sbjct 1188 GCAGATTGTGTAATTGAAACTCACAAGGAAGGAGAACTCTACTGA 1144
Score = 100 bits (110), Expect = 3e-16
Identities = 157/225 (70%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 176172 TATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCAACTACTCGTGCCGCGCTGGT 176231
|| ||||| ||||| || ||||| || ||||||||||| |||||||||||||| ||
Sbjct 3836 TACATTCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGCGCCGGA 3777
Query 176232 GCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGGTAGATCAAAGCGATCAATCG 176291
|| || || | ||||| || || | | || || | | ||||| ||| ||
Sbjct 3776 GCATGCTCTACCTGTGCTGGGAAGATTGTATCTGGTTCATTGGATCAGTCTGATGGCTCA 3717
Query 176292 TTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGACTTGTGTTTCATATCCTACG 176351
||||||||||| ||| || | | ||| || | || || ||||| || ||||| ||
Sbjct 3716 TTCCTTGATGACACCCAAATGGGAGAAGGATTTCTACTTACCTGTGTCTCCTATCCAACT 3657
Query 176352 AGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACTTTATTGA 176396
|||||||| ||||| ||| | || |||| ||||| || |||
Sbjct 3656 GCAGATTGTGTAATTGAAACTCACAAGGAAGGAGAACTCTACTGA 3612
>seq221580
Length=2368
Score = 102 bits (112), Expect = 1e-16
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 176161 CTGACGATCAGT-ATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCAACTACTCG 176219
|||| || |||| | ||||||||| | ||||| || || ||| | ||||| |||||
Sbjct 1574 CTGATGA-CAGTTACATTCTGGATTCAGCTGAAGAGGCTGGATTGGAACTACCATACTCA 1632
Query 176220 TGCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGGTAGATCAA 176279
||| | ||||| || || || | |||||| |||| ||| || || | || |||||
Sbjct 1633 TGCAGAGCTGGAGCATGCTCTACTTGTGCTGGAAGACTGGATTCAGGTGCTGTGGATCAG 1692
Query 176280 AGCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGACTTGTGTT 176339
|||||||| || ||||| || | ||||| || ||||| | |||| || |||||
Sbjct 1693 TCAGATCAATCTTTTCTTGAAGAACAGCAGATAGAGAAAGGTTACCTTCTCACATGTGTC 1752
Query 176340 TCATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACT 176389
||||| || || |||||||||||| | || | || || || || ||
Sbjct 1753 TCATACCCGACATCAGATTGTGTGATTTACACCCACAAGGAGGAAGATCT 1802
>seq76780
Length=5561
Score = 84.2 bits (92), Expect = 3e-11
Identities = 138/199 (69%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 178991 TTCGTATCTTGAGGGATGTAATTTCCTTACTGCTGCTGTATCAACTCCTGCTGACGCTCT 179050
||| ||| | || || || || ||| | || ||||| || || ||||| ||| | | |
Sbjct 406 TTCTTATTTAGAAGGCTGCAACTTCTTAACCGCTGCAGTTTCCACTCCCGCTAATAGTTT 347
Query 179051 CGGACATTCCCTACTTCTTCTATGGGGTCCAGAAGCTCAGGGAGATTTCGTCCGCTGGCT 179110
| ||| || | | | || |||||||| ||||| |||||| |||| | | |||
Sbjct 346 AGCACACTCTTTGTTGATACTGTGGGGTCCTGAAGCACAGGGAAATTTTACCTGTTGGTG 287
Query 179111 CCAACTTGGGGGACTATGGCCTTTTGTGGCGCTCCACGGTGCCTTCGCTCTCATAGGTTT 179170
|| | || || || ||| ||||||| || |||||||||| |||| | ||||||||
Sbjct 286 TCAGTTAGGCGGTCTGTGGACTTTTGTTGCTTTCCACGGTGCTTTCGGATTAATAGGTTT 227
Query 179171 CATGCTTCGGCAGTTTGAA 179189
|||| | || | ||||||
Sbjct 226 CATGTTACGTTAATTTGAA 208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 594637278955600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |