Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_031944.1
Length=185102
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 219 5e-52
seq95291 192 7e-44
seq78999 96.9 4e-15
>seq80997
Length=4773
Score = 219 bits (242), Expect = 5e-52
Identities = 314/439 (72%), Gaps = 4/439 (1%)
Strand=Plus/Plus
Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411
|||||||| ||| ||||| ||| || || ||||| || | || ||||| || || ||
Sbjct 4336 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4395
Query 169412 ATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCC 169471
||||| || | || | ||||| || || || ||||| || |||| ||| ||
Sbjct 4396 ATGATTCCTACTTTATTGACTGCAACTTCTGTATTTATTATCGCTTTTATCGCTGCCCCT 4455
Query 169472 CCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAAC 169531
|| || || || || || || || || || ||| |||| ||||| | ||||| |||||
Sbjct 4456 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAAT 4515
Query 169532 ATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCATC 169591
||||| |||||||| || | || |||| || || ||| | || || ||||| |||
Sbjct 4516 ATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGATC 4575
Query 169592 TGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGTC 169651
||||||||||| | | ||||| ||||| |||||||| ||||||| |||| ||||
Sbjct 4576 TGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGTT 4635
Query 169652 TTCCACTTCCTCATCG--GCATCTATGCTTACATGGGTCGTGAGTGGGAATTGTCCTATC 169709
| |||||| | | | | | || ||| ||||||||||||||||||||| | | ||
Sbjct 4636 CTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGTCGTGAGTGGGAACTTAGTTTTC 4693
Query 169710 GTCTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCG 169769
||||||||||||| |||||||| |||||| || | |||| |||| || || |
Sbjct 4694 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACTA 4753
Query 169770 CTGTTTTCCTGGTCTACCC 169788
|||||||| || |||| ||
Sbjct 4754 CTGTTTTCTTGATCTATCC 4772
>seq95291
Length=6073
Score = 192 bits (212), Expect = 7e-44
Identities = 292/412 (71%), Gaps = 4/412 (1%)
Strand=Plus/Minus
Query 169343 TGGGAACAATTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTC 169402
|||| || |||||||| ||| ||||| || || || ||||| || | || |||||
Sbjct 6070 TGGGGTCACTTCTGTAATTGGATAACCAACATCGAAAATCGTCTTTACATTGGATGGTTT 6011
Query 169403 GGCGTCCTGATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATC 169462
| || ||||||| || | || | |||| || || || ||||| || |||
Sbjct 6010 GATGTTTTGATGATTCCTACTTTATTGACTGCAAATTCTGTATTTATTATCGCTTTTATC 5951
Query 169463 GGTGCTCCCCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTAT 169522
| ||| || || || || || || || || || || | ||| |||| ||||| | |||
Sbjct 5950 GCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATCTCTACTTTAT 5891
Query 169523 GGTAACAACATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTC 169582
|| ||||| ||||| | |||||| || | || |||| || || ||| | || ||
Sbjct 5890 GGAAACAATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTT 5831
Query 169583 TATCCCATCTGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAA 169642
||||| |||||||||||||| | | ||||| ||||| |||||||| ||||||| ||
Sbjct 5830 TATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAA 5771
Query 169643 CTGGTTGTCTTCCACTTCCTCATCG--GCATCTATGCTTACATGGGTCGTGAGTGGGAAT 169700
|| |||| | |||||| | | | | | || ||| |||||||||||||||||||||
Sbjct 5770 CTAATTGTTCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGTCGTGAGTGGGAAC 5713
Query 169701 TGTCCTATCGTCTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCC 169752
| | ||||||||||||||| |||||||| |||||| || || |||||
Sbjct 5712 TTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCC 5661
>seq78999
Length=659
Score = 96.9 bits (106), Expect = 4e-15
Identities = 212/315 (67%), Gaps = 2/315 (1%)
Strand=Plus/Minus
Query 171298 CTAATCGTTTCTGGTCGCAGATTTTTGGTATCGCGTTCAGCAATAAGCGTTGGTTGCATT 171357
||||||| || ||||| | || ||| | || ||| |||||| ||||||| | ||
Sbjct 323 CTAATCGCTTTTGGTCATAAATCTTTAAGGTTGCTTTCTTCAATAAATGTTGGTTACGTT 264
Query 171358 TCTTTATGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCAGTAGTCTGGGGATTATTGGTC 171417
|| |||| | ||||| || || | ||| | || ||| || | | ||| | || ||
Sbjct 263 -CTGTATGTTATTTGTACCAGTAACTGGTTTACGGATCATTACTTTTGGGGTAGTTAGTT 205
Query 171418 TTGCTCTTAATCTTAGGGCTTATGATTTCGTAAGTCAGGAGGTCAGAGCAGCAGAAGATC 171477
| || || || || | |||||||| || || | | || | | | |||||||||||
Sbjct 204 TGGCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGATC 145
Query 171478 CAGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTTCGTGCATGGA 171537
| | || ||||| ||||| ||||| | || | || || |||||| |||||| ||||
Sbjct 144 CTTA-TTTGAGACTTTCTACACCAAAAGTATTTTCTTAAACGAAGGTATTCGTGGGTGGA 86
Query 171538 TGGCACCAGTAGACCAACCACATGAAAACTTTGTGTTCCCAGAGGAAGTTCTACCTCGTG 171597
||| | ||| | | ||||||||| || | ||| | | || |||||||| | ||
Sbjct 85 TGGGAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACCACATG 26
Query 171598 GCAATGCACTTTGAT 171612
| || | |||| ||
Sbjct 25 GAAACACTCTTTAAT 11
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590539985393200
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