Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq161659 223 4e-53
seq108677 201 1e-46
seq163919 197 1e-45
seq121390 196 5e-45
seq116819 145 8e-30
seq54104 100 3e-16
seq96332 91.5 2e-13
>seq161659
Length=370
Score = 223 bits (246), Expect = 4e-53
Identities = 218/279 (78%), Gaps = 8/279 (3%)
Strand=Plus/Plus
Query 8346 TCACTCT-GTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGC 8404
||||||| ||| || |||| ||||||| |||| | ||| |||||| ||| | |||||
Sbjct 71 TCACTCTTGTTTCCACGGCTAGAGTGCAATGGCGCGGTCTTGGCTCACCGCACCTTCCGC 130
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
||||||||||| ||| ||||||||||||||||||| || |||| ||||||||||| |
Sbjct 131 CTCCCGGGTTCGAGCGCTTCTCCTGCCTCAGCCTCCCGATTAGCGGGGATTACAGGGAGG 190
Query 8465 AGCCACCACGCCAAGCTA-----ATTTTTGTATTTTTAGTAGAGAGA--GGGTTTCACCA 8517
|| ||||||| ||| || ||||| |||||||||| | | || || |||
Sbjct 191 CACCCCCACGCCTGGCTTGGCTGATGTTTGTGTTTTTAGTAGGCACGCCGTGTCTCTCCA 250
Query 8518 TGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCA 8577
||||| |||||||||||| |||||| |||||| |||||| | || |||||||||| |
Sbjct 251 TGTTGCTCAGGCTGGTCTCCAACTCCCGACCTCCTGTGATGCGCCCACCTCGGCCTCTCG 310
Query 8578 AAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616
|||||||||||| || ||| |||||||||| ||| ||||
Sbjct 311 AAGTGCTGGGATGACGGGCGTGAGCCACCGTGCCCGGCC 349
>seq108677
Length=216
Score = 201 bits (222), Expect = 1e-46
Identities = 174/216 (81%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 8388 CTCACTGCAACCTCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAG 8447
|||||||||||||||||||||| |||||||| ||||||| | |||| |||| ||||||
Sbjct 216 CTCACTGCAACCTCCGCCTCCCCGGTTCAAGTGATTCTCCCACTTCAGACTCCTGAGTAG 157
Query 8448 CTGGGATTACAGGCAAAAGCCACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAG 8507
|||||| || ||| |||||||| || |||||||||| |||| ||||||| |
Sbjct 156 CTGGGACTATAGGTGTGCGCCACCACACCTGGCTAATTTTTAAGTTTTGTGTAGAGATGG 97
Query 8508 GGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCT 8567
||| | || ||||| |||||||||||| |||||||| |||| ||||||| |||| ||
Sbjct 96 GGTCTTACTCTGTTGCCCAGGCTGGTCTACAACTCCTGGGCTCAAGTGATCCCCCTGTCT 37
Query 8568 CGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 8603
|||||||||||||||| ||||||||| ||||||
Sbjct 36 TGGCCTCCCAAAGTGCTTGGATTACAGCTGTGAGCC 1
>seq163919
Length=382
Score = 197 bits (218), Expect = 1e-45
Identities = 171/210 (81%), Gaps = 3/210 (1%)
Strand=Plus/Plus
Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403
||||||||||| |||||||||| |||||||||| ||||| | |||||||| ||||||
Sbjct 60 TCTCACTCTGTCGCCCAGGCTGTAGTGCAGTGGTGCGATCTTGGGTCACTGCAGCCTCCG 119
Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAG--GC 8461
||| || ||||||||| ||||| | || |||||||| ||||||||||| |||||| ||
Sbjct 120 CCTGCCAGGTTCAAGCAATTCTTCCACCCCAGCCTCCCGAGTAGCTGGGGTTACAGGTGC 179
Query 8462 AAAAGCCACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGA-GAGGGTTTCACCATGT 8520
|||| |||| || ||| ||||||| |||||||| | ||||||||||| ||
Sbjct 180 CTGCCCCACGGCGCCTGACTCCATTTCGTATTTTCAGTAGAGACGGGGGTTTCACCACGT 239
Query 8521 TGGCCAGGCTGGTCTCGAACTCCTGACCTC 8550
||||| ||||||||||||||||||||||||
Sbjct 240 TGGCCGGGCTGGTCTCGAACTCCTGACCTC 269
>seq121390
Length=235
Score = 196 bits (216), Expect = 5e-45
Identities = 167/205 (81%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 8411 GGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCAC 8470
||||||||| |||||||||||||||||| | || ||||||||||| ||||| |||||
Sbjct 235 GGTTCAAGCGATTCTCCTGCCTCAGCCTTCCTAGCAGCTGGGATTATAGGCATGTGCCAC 176
Query 8471 CACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCT 8530
| |||| |||| |||| ||||||| | | |||| || |||| ||||||||| | ||||
Sbjct 175 CGCGCCCGGCTAGTTTT-GTATTTTCAATTGAGACGGGATTTCTCCATGTTGGTCGGGCT 117
Query 8531 GGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATT 8590
||||| |||||| ||| ||| ||||| | | ||||||| |||||||||| |||||
Sbjct 116 TGTCTCCAACTCCCGACTTCAGGTGATGCGTCCACCTCGGCATCCCAAAGTGACGGGATG 57
Query 8591 ACAGGCATGAGCCACCGCGCCTGGC 8615
||||||||||||||||||||| |||
Sbjct 56 ACAGGCATGAGCCACCGCGCCCGGC 32
>seq116819
Length=227
Score = 145 bits (160), Expect = 8e-30
Identities = 170/227 (75%), Gaps = 7/227 (3%)
Strand=Plus/Plus
Query 8357 CCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCGGGTTCA 8416
|||||||| ||||||||||| ||||| ||||||| | || ||||| | | |||
Sbjct 3 CCCAGGCTTAAGTGCAGTGGCGCCATCTCAACTCACTGTAGTCTTGACCTCCAGAGCTCA 62
Query 8417 AGCT-ATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAA----GCCACC 8471
| || || || | | ||||||||| || |||||||||| ||| ||| | |||| |
Sbjct 63 ACCTGATCCTTCCACTTCAGCCTCCCGATTAGCTGGGATCACA--CAAGAATGTGCCATC 120
Query 8472 ACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTG 8531
|| || |||||||||||||||||| |||| || |||| |||| |||||| ||||||||
Sbjct 121 ACACCTGGCTAATTTTTGTATTTTTTGTAGGGACAGGGGCTCACTATGTTGTCCAGGCTG 180
Query 8532 GTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAA 8578
|||| ||||||| | |||| | |||| | ||| |||||||||
Sbjct 181 GTCTTGAACTCCCAAACTCAAGCAATCCTCTCACCTTAGCCTCCCAA 227
>seq54104
Length=208
Score = 100 bits (110), Expect = 3e-16
Identities = 94/118 (80%), Gaps = 5/118 (4%)
Strand=Plus/Plus
Query 8507 GGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCC----ACC 8562
||||| | ||||||| ||| |||||||||||||||||| ||||| | |||| ||
Sbjct 45 GGGTTCTATCATGTTGCCCACGCTGGTCTCGAACTCCTGTCCTCAAGCAATCCGCCTGCC 104
Query 8563 TGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGC-CCTT 8619
|||||||||| |||| | ||||| ||||||||| |||| | | ||||||||| ||||
Sbjct 105 TGCCTCGGCCGCCCACACTGCTGCTATTACAGGCGTGAGACGCTGCGCCTGGCTCCTT 162
>seq96332
Length=200
Score = 91.5 bits (100), Expect = 2e-13
Identities = 94/122 (77%), Gaps = 1/122 (1%)
Strand=Plus/Plus
Query 8349 CTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCC 8408
|||||| || |||||||||||| ||| |||| | ||||| |||| |||| |||||
Sbjct 74 CTCTGTCACCTGGGCTGGAGTGCAATGGTAGGATCACGGCTCAATGCAGCCTCGACCTCC 133
Query 8409 CGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCC 8468
||| | ||| || ||||||| | |||||| |||||||||||| |||||| | ||||
Sbjct 134 TGGGCTTAAGGAATCCTCCTGCTTTGGCCTCCTGAGTAGCTGGGACCACAGGC-ACAGCC 192
Query 8469 AC 8470
||
Sbjct 193 AC 194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 520027605449000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |