Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq161659 223 4e-53 seq108677 201 1e-46 seq163919 197 1e-45 seq121390 196 5e-45 seq116819 145 8e-30 seq54104 100 3e-16 seq96332 91.5 2e-13 >seq161659 Length=370 Score = 223 bits (246), Expect = 4e-53 Identities = 218/279 (78%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 8346 TCACTCT-GTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGC 8404 ||||||| ||| || |||| ||||||| |||| | ||| |||||| ||| | ||||| Sbjct 71 TCACTCTTGTTTCCACGGCTAGAGTGCAATGGCGCGGTCTTGGCTCACCGCACCTTCCGC 130 Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 ||||||||||| ||| ||||||||||||||||||| || |||| ||||||||||| | Sbjct 131 CTCCCGGGTTCGAGCGCTTCTCCTGCCTCAGCCTCCCGATTAGCGGGGATTACAGGGAGG 190 Query 8465 AGCCACCACGCCAAGCTA-----ATTTTTGTATTTTTAGTAGAGAGA--GGGTTTCACCA 8517 || ||||||| ||| || ||||| |||||||||| | | || || ||| Sbjct 191 CACCCCCACGCCTGGCTTGGCTGATGTTTGTGTTTTTAGTAGGCACGCCGTGTCTCTCCA 250 Query 8518 TGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCA 8577 ||||| |||||||||||| |||||| |||||| |||||| | || |||||||||| | Sbjct 251 TGTTGCTCAGGCTGGTCTCCAACTCCCGACCTCCTGTGATGCGCCCACCTCGGCCTCTCG 310 Query 8578 AAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 |||||||||||| || ||| |||||||||| ||| |||| Sbjct 311 AAGTGCTGGGATGACGGGCGTGAGCCACCGTGCCCGGCC 349 >seq108677 Length=216 Score = 201 bits (222), Expect = 1e-46 Identities = 174/216 (81%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 8388 CTCACTGCAACCTCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAG 8447 |||||||||||||||||||||| |||||||| ||||||| | |||| |||| |||||| Sbjct 216 CTCACTGCAACCTCCGCCTCCCCGGTTCAAGTGATTCTCCCACTTCAGACTCCTGAGTAG 157 Query 8448 CTGGGATTACAGGCAAAAGCCACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAG 8507 |||||| || ||| |||||||| || |||||||||| |||| ||||||| | Sbjct 156 CTGGGACTATAGGTGTGCGCCACCACACCTGGCTAATTTTTAAGTTTTGTGTAGAGATGG 97 Query 8508 GGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCT 8567 ||| | || ||||| |||||||||||| |||||||| |||| ||||||| |||| || Sbjct 96 GGTCTTACTCTGTTGCCCAGGCTGGTCTACAACTCCTGGGCTCAAGTGATCCCCCTGTCT 37 Query 8568 CGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 8603 |||||||||||||||| ||||||||| |||||| Sbjct 36 TGGCCTCCCAAAGTGCTTGGATTACAGCTGTGAGCC 1 >seq163919 Length=382 Score = 197 bits (218), Expect = 1e-45 Identities = 171/210 (81%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 ||||||||||| |||||||||| |||||||||| ||||| | |||||||| |||||| Sbjct 60 TCTCACTCTGTCGCCCAGGCTGTAGTGCAGTGGTGCGATCTTGGGTCACTGCAGCCTCCG 119 Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAG--GC 8461 ||| || ||||||||| ||||| | || |||||||| ||||||||||| |||||| || Sbjct 120 CCTGCCAGGTTCAAGCAATTCTTCCACCCCAGCCTCCCGAGTAGCTGGGGTTACAGGTGC 179 Query 8462 AAAAGCCACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGA-GAGGGTTTCACCATGT 8520 |||| |||| || ||| ||||||| |||||||| | ||||||||||| || Sbjct 180 CTGCCCCACGGCGCCTGACTCCATTTCGTATTTTCAGTAGAGACGGGGGTTTCACCACGT 239 Query 8521 TGGCCAGGCTGGTCTCGAACTCCTGACCTC 8550 ||||| |||||||||||||||||||||||| Sbjct 240 TGGCCGGGCTGGTCTCGAACTCCTGACCTC 269 >seq121390 Length=235 Score = 196 bits (216), Expect = 5e-45 Identities = 167/205 (81%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 8411 GGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCAC 8470 ||||||||| |||||||||||||||||| | || ||||||||||| ||||| ||||| Sbjct 235 GGTTCAAGCGATTCTCCTGCCTCAGCCTTCCTAGCAGCTGGGATTATAGGCATGTGCCAC 176 Query 8471 CACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCT 8530 | |||| |||| |||| ||||||| | | |||| || |||| ||||||||| | |||| Sbjct 175 CGCGCCCGGCTAGTTTT-GTATTTTCAATTGAGACGGGATTTCTCCATGTTGGTCGGGCT 117 Query 8531 GGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATT 8590 ||||| |||||| ||| ||| ||||| | | ||||||| |||||||||| ||||| Sbjct 116 TGTCTCCAACTCCCGACTTCAGGTGATGCGTCCACCTCGGCATCCCAAAGTGACGGGATG 57 Query 8591 ACAGGCATGAGCCACCGCGCCTGGC 8615 ||||||||||||||||||||| ||| Sbjct 56 ACAGGCATGAGCCACCGCGCCCGGC 32 >seq116819 Length=227 Score = 145 bits (160), Expect = 8e-30 Identities = 170/227 (75%), Gaps = 7/227 (3%) Strand=Plus/Plus Query 8357 CCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCGGGTTCA 8416 |||||||| ||||||||||| ||||| ||||||| | || ||||| | | ||| Sbjct 3 CCCAGGCTTAAGTGCAGTGGCGCCATCTCAACTCACTGTAGTCTTGACCTCCAGAGCTCA 62 Query 8417 AGCT-ATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAA----GCCACC 8471 | || || || | | ||||||||| || |||||||||| ||| ||| | |||| | Sbjct 63 ACCTGATCCTTCCACTTCAGCCTCCCGATTAGCTGGGATCACA--CAAGAATGTGCCATC 120 Query 8472 ACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTG 8531 || || |||||||||||||||||| |||| || |||| |||| |||||| |||||||| Sbjct 121 ACACCTGGCTAATTTTTGTATTTTTTGTAGGGACAGGGGCTCACTATGTTGTCCAGGCTG 180 Query 8532 GTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAA 8578 |||| ||||||| | |||| | |||| | ||| ||||||||| Sbjct 181 GTCTTGAACTCCCAAACTCAAGCAATCCTCTCACCTTAGCCTCCCAA 227 >seq54104 Length=208 Score = 100 bits (110), Expect = 3e-16 Identities = 94/118 (80%), Gaps = 5/118 (4%) Strand=Plus/Plus Query 8507 GGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCC----ACC 8562 ||||| | ||||||| ||| |||||||||||||||||| ||||| | |||| || Sbjct 45 GGGTTCTATCATGTTGCCCACGCTGGTCTCGAACTCCTGTCCTCAAGCAATCCGCCTGCC 104 Query 8563 TGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGC-CCTT 8619 |||||||||| |||| | ||||| ||||||||| |||| | | ||||||||| |||| Sbjct 105 TGCCTCGGCCGCCCACACTGCTGCTATTACAGGCGTGAGACGCTGCGCCTGGCTCCTT 162 >seq96332 Length=200 Score = 91.5 bits (100), Expect = 2e-13 Identities = 94/122 (77%), Gaps = 1/122 (1%) Strand=Plus/Plus Query 8349 CTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCC 8408 |||||| || |||||||||||| ||| |||| | ||||| |||| |||| ||||| Sbjct 74 CTCTGTCACCTGGGCTGGAGTGCAATGGTAGGATCACGGCTCAATGCAGCCTCGACCTCC 133 Query 8409 CGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCC 8468 ||| | ||| || ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct 134 TGGGCTTAAGGAATCCTCCTGCTTTGGCCTCCTGAGTAGCTGGGACCACAGGC-ACAGCC 192 Query 8469 AC 8470 || Sbjct 193 AC 194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520027605449000