Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq681135 100 6e-16 seq420636 84.2 5e-11 >seq681135 Length=1827 Score = 100 bits (110), Expect = 6e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 230410 GAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGC-ATGAACGCTGAACT 230468 |||| |||||| | || ||||| | || || ||| || ||| |||||| || || Sbjct 492 GAAAGAGAGTTCGTCTGCGACGCGTTACCGTG-CGCTCTAGTGGGGATGAACAGTGCTCT 434 Query 230469 TATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528 ||| | || |||||||||||||| ||||| ||| | | | || | ||||||| ||| Sbjct 433 AATGAGTCAATACATCGAATTCGTTGCCGATCGCCTGCTCGGCGCCTTGGGTTACGGGAA 374 Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGAC 230588 |||||||| | ||| || || | | |||||||| || || | || || ||||| Sbjct 373 GATGTACAACGTTTCGAATCCGTTCGACTGGATGGAGCTAATCTCTTTGCAGGGAAAGAC 314 Query 230589 CAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 |||||||||||| ||| | || | || || |||| | || |||||| Sbjct 313 CAACTTCTTCGAGAAGAGGGTTGGGGAGTACCAGAAGGCTTCAGTGATG 265 >seq420636 Length=2609 Score = 84.2 bits (92), Expect = 5e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766 || || |||||||||||||| |||||| || || || |||| || |||||| |||||||| Sbjct 931 CTAGCTCGTCTAGCTCAGTCAGTAGAGTGCAAGGCTCTTAACCTTGTGGTCATGGGTTCG 990 Query 165767 AGCCCCACGATGGG 165780 ||||||||| |||| Sbjct 991 AGCCCCACGGTGGG 1004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1047575958108750