Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq681135 134 2e-26 >seq681135 Length=1827 Score = 134 bits (148), Expect = 2e-26 Identities = 371/556 (67%), Gaps = 16/556 (3%) Strand=Plus/Minus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081 |||||||||||||| ||||| |||| || |||||||| | ||| || ||||| || || Sbjct 1116 TGGGAAATGTACAAGAAGGCCGAGGCGTCGTTTTGGACCGCCGAGGAAGTCGACCTCTCT 1057 Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141 |||||| | | ||||| | | | | | || ||| | || || || Sbjct 1056 CAGGACCAGCGTCAATGGGAAAACC--TCACCAGCGAC-GAGAAGCACTTCATCAGTCAT 1000 Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTC 125201 || | |||||||| |||| || || ||||||||| ||| ||||| | | ||| Sbjct 999 ATCCTTGCCTTCTTCGCCGCTTCTGACGGAATCGTCCTCGAAAATCTCGCCGGAAGGTTC 940 Query 125202 TCTCAAGAGTTGACCAT-TC-CAGAGGTGTCGTGCTTT-TACGGATTCCAAATCATGATT 125258 | ||| | ||| || | |||| |||||| || || ||||| || || ||| Sbjct 939 ATGAAGGAGGT--CCAGGTCTCCGAGGC-TCGTGCCTTCTATGGATTTCAGATTGCCATT 883 Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAA 125318 || ||| | ||||| || |||||| | || | || ||| || ||||| | Sbjct 882 GAAAACATCCACTCTGAGATGTACAGTCTGTTGTTAGAATCGTATATCAAGGATCCAAAG 823 Query 125319 CGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAA 125378 ||| ||| ||||||| |||||||||| || | || | | | || || || || Sbjct 822 GAGAAAAACAGGCTCTTTCACGCAATCGATACCATCCCCTGTGTGGCGAAGAAAGCCCAG 763 Query 125379 TGGGTGATTCGGTGGATCGATGACGAC-AAGTCTTCGTACGCCGACAGACTGGTGGCATT 125437 |||| | || |||||||| | | | || ||| | |||| | ||| | ||||| Sbjct 762 TGGGCTCTCCGATGGATCGACGGCTCCGAAACCTTTG----CCGAACGCCTGCTCGCATT 707 Query 125438 CGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTT-TGCGGCCATCTTTTGGCTCAAGA 125496 |||| ||| || ||||||||||| || || || || ||| | || || ||||| |||| Sbjct 706 CGCCTGCGTGGAAGGCATCTTCTTCTCCGGAAGCTTCTGCT-CGATATTCTGGCTAAAGA 648 Query 125497 AGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCC 125556 | ||||| |||||||| ||| | || | || ||||| || || |||||||||||| Sbjct 647 AACGCGGTCTCATGCCGGGATTAACTTTCTCAAATGAGTTAATCTCGCGAGACGAGGGCT 588 Query 125557 TACACTGTGACTTTGC 125572 ||||||| || || || Sbjct 587 TACACTGCGATTTCGC 572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 734055032655000