Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq736048 95.1 9e-15 seq109077 93.3 3e-14 >seq736048 Length=1016 Score = 95.1 bits (104), Expect = 9e-15 Identities = 164/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-G 15193 ||||||||||||| | | ||| || |||||||| || || || || |||||||| || | Sbjct 407 TGCCACCTCTCAAACGGAGAACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCCG 466 Query 15194 CTTAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGT 15251 | ||| || | ||||| | ||||| ||||| |||| | | || ||||| Sbjct 467 CC---AATGTCCGACCATCTTCCAGCTGTTTACCAGCAAATATGAGCCTCTGCTGGTCTG 523 Query 15252 TTGGAATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTT 15310 ||||| || || ||||| ||||| ||| || ||| | || ||||| || | | Sbjct 524 GGGGAATACCCTCCTTGTCCTGGATTTTAGCT-TTCACATTATCGATGGTGTCTGAACTC 582 Query 15311 TCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || | |||||| ||||| || || || || || |||||||||||||| Sbjct 583 TCAACTTCAAGGGTAATAGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCAT 635 >seq109077 Length=726 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || || ||||| || ||||| || ||||||||||| ||| ||| | | || || Sbjct 212 ACCAAGTGGAGGGTAGACTCTTTCTGAATGTTGTAATCAGCAAGAGTTCGCCCATCCTCA 271 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || ||||| ||| | ||||| | || ||||| |||||| || || ||||| | Sbjct 272 AGCTGCTTGCCCGCGAAAATCAACCTCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGA 331 Query 15275 AT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || || ||| || ||| | || |||||||| | || || ||||||||||| || || Sbjct 332 ATCTTCGCT-TTCACATTGTCGATGGTATCCGAGCTCTCAACCTCTAAGGTAATTGTCTT 390 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || | ||| || || || || ||||| Sbjct 391 GCCAGTTAAAGTCTTCACGAAGATCTGCAT 420 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || ||||| || || ||||| || ||||||||||| ||| ||| ||||||| Sbjct 440 ACCAAGTGAAGTGTTGACTCTTTCTGAATGTTGTAATCCGCGAGAGTTCGGCCGTCTTCC 499 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || || || ||| | |||| | || ||||| |||||| || || || || Sbjct 500 AGCTGCTTCCCTGCGAAAATCAGCCTCTGCTGGTCCGGTGGAATGCCCTCCTTATCCTGG 559 Query 15275 AT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || || ||| || || | || ||||| ||| |||| || |||| ||||| || || Sbjct 560 ATCTTAGCT-TTCACGTTGTCAATGGTGTCGGAGCTTTCGACCTCTAGAGTAATTGTCTT 618 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || ||||||||||| |||||||| ||||| Sbjct 619 TCCGGTCAGAGTTTTAACAAAAATCTGCAT 648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358841619638625