Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq662336 87.8 2e-12 >seq662336 Length=3756 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 ||||| ||||| || ||||| ||||| || ||| | |||| | ||||||||||| ||| Sbjct 166 GACAAGGAAGGCATTCCTCCTGATCAGCAGAGATTGATTTTTGCTGGCAAACAACTGGAA 225 Query 26922 GATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 |||| | | | | || |||||||| |||||||| || || | || || || || Sbjct 226 GATGGTCGCACTCTTGCAGATTATAACATCCAAAAAGAGTCCACACTTCACCTTGTTTTG 285 Query 26982 AGACTTAGAGGAGGAAAAATATGATTA 27008 || ||||| ||||| || |||||||| Sbjct 286 AGGCTTAGGGGAGG--AACTATGATTA 310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474138292410000