Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq109077 86.0 5e-12 seq750760 84.2 2e-11 >seq109077 Length=726 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || ||||| || || |||||||| || || | ||| | |||| Sbjct 437 AGGACCAAGTGAAGTGTTGACTCTTTCTGAATGTTGTAATCCGCGAGAGTTCGGCCGTCT 496 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || || || || |||| |||| ||| |||||| || | |||||| || || Sbjct 497 TCCAGCTGCTTCCCTGCGAAAATCAGCCTCTGCTGGTCCGGTGGAATGCCCTCCTTATCC 556 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| ||||| | | | | |||||| | || || | || || | Sbjct 557 TGGATCTTAGCT--TTCACGTTGTCAATGGTGTCGGAGCTTTCGACCTCTAGAGTAATTG 614 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 | ||||||||||| ||||| ||||||||||||||| Sbjct 615 TCTTTCCGGTCAGAGTTTTAACAAAAATCTGCATT 649 >seq750760 Length=1299 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || ||||||||||| || | ||| | ||||| Sbjct 346 AGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTCCGGCCGTCC 287 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || || || || | || || || || |||||| ||| | ||| || ||||| Sbjct 286 TCGAGCTGCTTCCCGGCGAATATGAGGCGTTGCTGGTCCGGAGGAATGCCTTCCTTGTCC 227 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| || |||| || | ||| |||| Sbjct 226 TGGATCTTGGC--CTTCACATTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTTATGG 169 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 | || || || || ||||| || || |||||||| || Sbjct 168 TCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401355003313750