Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq736048 141 8e-29 seq109077 113 4e-20 seq689433 104 2e-17 seq313781 96.9 3e-15 seq113432 93.3 4e-14 seq754749 89.7 4e-13 seq702768 84.2 2e-11 seq620935 84.2 2e-11 seq611781 84.2 2e-11 >seq736048 Length=1016 Score = 141 bits (156), Expect = 8e-29 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || | || || ||||| |||| |||||||| || | | | Sbjct 863 ATGCAAATTTTTGTGAAGACCCTCACTGGAAAAACTATCACCCTTGAAGTTGAGAGCTCA 804 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || ||||| |||||| || ||||||||||||||||| || || || Sbjct 803 GACACCATTGATAATGTCAAAGCAAAAATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 744 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||||||||| || || ||| | |||||| ||| || | | ||||| ||| Sbjct 743 CAGAGGCTTATATTTGCTGGTAAGCAGCTCGAGGATGGCCGGACATTGGCTGATTATAAC 684 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 || || ||||| |||||| | || || ||| | || || Sbjct 683 ATCCAGAAAGAGTCCACCCTTCACTTGGTTCTCCGTTT 646 Score = 125 bits (138), Expect = 6e-24 Identities = 126/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || ||||| |||||||| ||||||||||||| || | | | Sbjct 179 ATGCAGATTTTTGTGAAGACCTTAACTGGTAAAACAATCACTCTTGAAGTTGAGAGCTCA 120 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| ||||||||| |||||||| || ||||| || || ||| Sbjct 119 GACACAATTGACAATGTCAAGGCAAAAATTCAGGACAAGGAAGGCATTCCTCCTGACCAA 60 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCAC 22382 || | || || ||||| || |||||| | |||||| |||||| Sbjct 59 CAGAGGCTGATCTTTGCTGGAAAACAGCTTGAGGATGGCCGCAC 16 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || | || || ||||| | || |||||||| || | | Sbjct 635 ATGCAAATTTTTGTGAAGACCCTCACTGGAAAAACTATTACCCTTGAAGTTGAGAGTTCA 576 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | ||| ||||| || ||||||||||||||||| || || || Sbjct 575 GACACCATCGATAATGTGAAAGCTAAAATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 516 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || |||||||| || |||||| | || ||| || || | | || |||||| Sbjct 515 CAGAGGCTCATATTTGCTGGTAAACAGCTGGAAGATGGTCGGACATTGGCGGACTACAAC 456 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || ||||| ||| | || || ||| | || ||| | || || Sbjct 455 ATCCAGAAGGAATCTACCCTTCACTTGGTTCTCCGTTTGAGAGGTGG 409 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | || |||||||| |||| ||||| || || | | Sbjct 407 ATGCAAATATTTGTGAAGACCCTTACTGGTAAAACTATCACCCTTGAGGTTGAGAGTTCA 348 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | ||| |||||| || |||||||| |||||||||||||| || Sbjct 347 GACACCATCGACAATGTGAAAGCAAAAATCCAGGACAAGGAAGGTATTCCACCCGACCAG 288 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || || ||| |||| ||| || || | | || ||||| Sbjct 287 CAGAGGCTAATCTTTGCTGGTAAGCAGCTAGAAGATGGTCGAACTTTGGCTGACTACAAT 228 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || ||||| ||| Sbjct 227 ATACAGAAGGAATCAACC 210 >seq109077 Length=726 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||||||||||||| | ||||| || || | ||||| || || |||| | || Sbjct 648 ATGCAGATTTTTGTTAAAACTCTGACCGGAAAGACAATTACTCTAGAGGTCGAAAGCTCC 589 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | ||| || || || || |||||||| |||||||| || || Sbjct 588 GACACCATTGACAACGTGAAAGCTAAGATCCAGGATAAGGAGGGCATTCCACCGGACCAG 529 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || || || || ||| | || || ||| || || | ||||||||| Sbjct 528 CAGAGGCTGATTTTCGCAGGGAAGCAGCTGGAAGACGGCCGAACTCTCGCGGATTACAAC 469 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| ||||| || || Sbjct 468 ATTCAGAAAGAGTCAAC 452 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || |||||||| || || || | || | || || || | | | Sbjct 420 ATGCAGATCTTCGTGAAGACTTTAACTGGCAAGACAATTACCTTAGAGGTTGAGAGCTCG 361 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | ||| || ||||| ||||||||||| |||||||| || || Sbjct 360 GATACCATCGACAATGTGAAAGCGAAGATTCAGGACAAGGAGGGGATTCCACCGGACCAG 301 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || || ||||| ||| | |||||| || || | | ||||||||| Sbjct 300 CAGAGGTTGATTTTCGCGGGCAAGCAGCTTGAGGATGGGCGAACTCTTGCTGATTACAAC 241 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| || ||| | || || || | || |||| || ||| Sbjct 240 ATTCAGAAAGAGTCTACCCTCCACTTGGTGCTTCGTCTGCGTGGTGGT 193 >seq689433 Length=414 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || ||| |||| || || ||||| | | | Sbjct 22 ATGCAGATATTTGTGAAGACCCTGACGGGAAAGACGATCACACTAGAGGTGGAGAGCTCA 81 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | || |||||||| ||||||||||| || || || ||||| Sbjct 82 GATACCATAGATAATGTGAAGGCCAAAATTCAGGACAAGGAGGGGATCCCTCCAGATCAG 141 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || || || || ||||| |||||| || || | | ||||||||| Sbjct 142 CAGAGGCTGATCTTCGCAGGGAAGCAGTTGGAGGATGGTCGGACACTTGCTGATTACAAC 201 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || ||||| Sbjct 202 ATTCAGAAGGAGTCCAC 218 >seq313781 Length=385 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22256 TCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACA 22315 |||| || || || |||| | |||| ||| | ||| | | ||| || ||||| |||| Sbjct 3 TCACCCTGGAGGTCGAAAGCTCCGACACCATTGACAACGTGAAAGCGAAGATTCAGGACA 62 Query 22316 AGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATC 22375 |||| || |||||||| || || || | || || || |||||||| ||| | |||||| Sbjct 63 AGGAAGGGATTCCACCAGACCAGCAGAGACTGATTTTCGCCGGCAAGCAGCTTGAGGATG 122 Query 22376 ACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGAT 22435 || || | | |||||||||||||| || || || ||| | || || || | || Sbjct 123 GGCGAACTCTTGCTGATTACAACATTCAGAAGGAGTCTACCCTCCACTTGGTGCTTCGTC 182 Query 22436 TGCGCGGAGGT 22446 ||||||| ||| Sbjct 183 TGCGCGGTGGT 193 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || || || |||| || || ||||| | || Sbjct 194 ATGCAAATCTTCGTGAAGACACTGACTGGAAAGACCATCACGCTGGAGGTGGAGAGTTCC 253 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || ||||| ||| ||||| ||||||||||| || ||||| ||||| Sbjct 254 GACACCATTGATAATGTCAAAGCAAAGATTCAGGACAAGGAGGGGATCCCACCGGATCAG 313 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || ||||| || ||| | || ||| | ||| | | || |||||| Sbjct 314 CAGAGGCTGATCTTCGCCGGGAAGCAGCTGGAAGATGGGAGGACCCTGGCGGACTACAAC 373 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 374 ATCCAGAAGGA 384 >seq113432 Length=226 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| |||||||| || | ||||| || || |||| |||||||| || | | | Sbjct 68 ATGCAAATATTTGTTAAGACACTCACCGGAAAGACCATCACCCTTGAAGTTGAGAGCTCA 127 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| || ||| || | || ||||| ||||||||||| || || || || || || Sbjct 128 GATACAGTTGACAATGTAAAGGCGAAAATCCAAGACAAGGAAGGAATCCCCCCTGACCAG 187 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGAT 22374 ||| | | || ||||| || || ||| | |||||| Sbjct 188 CAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGAT 223 >seq754749 Length=725 Score = 89.7 bits (98), Expect = 4e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || |||||||| || | || || ||||| | ||||||||||| || | Sbjct 586 AGATGCAGATCTTTGTTAAGACCCTTACTGGAAAAACCATAACTCTTGAAGTTGAGAGTT 645 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | |||||| | ||| || | || |||||| ||||||||||||||||| || || || | Sbjct 646 CTGATACCATTGACAATGTTAAGGCAAAAATCCAAGACAAGGAGGGTATCCCCCCTGACC 705 Query 22337 AACAACGTCTTATATTTGC 22355 | ||| | | || ||||| Sbjct 706 AGCAAAGGTTGATTTTTGC 724 >seq702768 Length=508 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || | || || || || | || || || || || | | | Sbjct 100 GATGCAGATATTTGTGAAGACCCTGACGGGAAAGACAATTACACTAGAGGTTGAGAGCTC 159 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || || | || || | || ||||||||| |||||||| || || || || ||||| Sbjct 160 AGACACTATAGATAATGTGAAGGCAAAAATTCAGGACAAGGAAGGGATCCCTCCAGATCA 219 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || ||||| || || ||||| |||||| || || | | |||||||| Sbjct 220 GCAGAGGCTCATCTTTGCAGGGAAGCAGTTGGAGGATGGTCGGACTCTTGCTGATTACAA 279 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTT 22428 |||||| || || || || | || || ||| Sbjct 280 CATTCAGAAGGAGTCTACTCTTCACTTGGTT 310 >seq620935 Length=1758 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || || || |||| || || || | || || || || ||| | Sbjct 252 AAGATGCAGATTTTCGTGAAGACCCTAACGGGGAAGACCATAACCCTAGAGGTTGAATCA 193 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | || || |||| || || ||||||||||| || || || || || Sbjct 192 TCTGACACGATCGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCGGAC 133 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || || || || || || ||||||||| | ||||| ||| ||| | |||| ||| Sbjct 132 CAGCAGCGCCTCATCTTCGCTGGCAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTAC 73 Query 22396 AACATTCAAAAAGAATCCACC 22416 || || || || || || ||| Sbjct 72 AATATCCAGAAGGAGTCAACC 52 >seq611781 Length=262 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | || || || || |||| ||||| ||||||| | | Sbjct 95 ATGCAAATATTTGTAAAGACACTGACTGGAAAGACCATCACGCTTGAGGTGGAAAGCTCT 154 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || | || ||||| ||||||||||| || || || || || || Sbjct 155 GATACAATCGACAATGTAAAGGCGAAAATCCAAGACAAGGAAGGAATCCCCCCAGACCAG 214 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGAT 22374 ||| | | || ||||| || || ||| | |||||| Sbjct 215 CAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGAT 250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415860091710625