Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq6489 140 7e-28 >seq6489 Length=247 Score = 140 bits (154), Expect = 7e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 218569 TCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCA 218628 |||||||| |||| |||||||| || ||| || | ||||| || ||| | | Sbjct 210 TCTATTCCTTCAATGGTTGATGGCCTAAAACCAGGTCAAAGGAAGATTCTTTTTTGCTCT 151 Query 218629 TTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAA 218688 |||||||| ||| | || ||||| || | || ||||||||||||||||| || || Sbjct 150 TTCAAGCGTAACTTCATTAAAGAAGCAAAAATTGCACAGTTTTCTGGTTATGTCTCTGAG 91 Query 218689 ATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAG 218748 ||||| |||||||| |||||||||||||| | ||||| | |||||||||||| Sbjct 90 CATTCTGCTTACCATCATGGTGAGCAGAGTCTTGCCAGCACCATTATTGGCATGGCACAG 31 Query 218749 GACTATGTGGGCAGTAACAACATGAAC 218775 |||| ||||||||| |||||||| ||| Sbjct 30 GACTTTGTGGGCAGCAACAACATAAAC 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1017879269651125