Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq736048 102 8e-17 seq750760 100 3e-16 seq726932 96.9 3e-15 >seq736048 Length=1016 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| ||||| || || |||||||| || ||| || || || || || ||||| | Sbjct 212 TTGATTCCTTCTGTATATTGTAGTCAGCCAAAGTTCGACCATCTTCTAGCTGCTTACCAG 271 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | ||||||| | ||| ||||| || || |||||||| ||||| ||||||| ||| | Sbjct 272 CAAAGATTAGCCTCTGCTGGTCGGGTGGAATACCTTCCTTGTCCTGGATTTTTGCTTTCA 331 Query 138539 -ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 ||||| | | |||||| | ||| ||||| | || | ||||||||||| || || Sbjct 332 CATTGT-CGATGGTGTCTGAACTCTCAACCTCAAGGGTGATAGTTTTACCAGTAAGGGTC 390 Query 138598 TTTACAAAAATCTGCATG 138615 || ||||| || |||||| Sbjct 391 TTCACAAATATTTGCATG 408 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| |||||| | ||| || || | | | || ||||| || ||||||||||| Sbjct 408 GCCACCTCTCAAACGGAGAACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCCGC 467 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || || || || |||||||| | | | || || | ||| ||||| || || Sbjct 468 CAATGTCCGACCATCTTCCAGCTGTTTACCAGCAAATATGAGCCTCTGCTGGTCTGGGGG 527 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| |||||| ||| | | || | |||||| | ||| || Sbjct 528 AATACCCTCCTTGTCCTGGATTTTAGCTTTCACATTATCGATGGTGTCTGAACTCTCAAC 587 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | ||||| ||||| || || || |||||||| |||||| Sbjct 588 TTCAAGGGTAATAGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCATG 636 Score = 82.4 bits (90), Expect = 8e-11 Identities = 129/181 (71%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 138436 TTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGT 138495 |||||||| || ||| || ||||| || ||||| || | | |||| || | |||| Sbjct 1 TTGTAGTCAGCCAAAGTGCGGCCATCCTCAAGCTGTTTTCCAGCAAAGATCAGCCTCTGT 60 Query 138496 TGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGT 138553 ||||| ||||| || ||||| ||||| ||| |||||| || | |||| | | |||| Sbjct 61 TGGTCAGGAGGAATGCCTTCCTTGTCC-TGAATTTTTGCCTTGACATTGT-CAATTGTGT 118 Query 138554 CGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCA 138613 | | ||| || || | || | ||||||||||| | || || ||||||||||||| Sbjct 119 CTGAGCTCTCAACTTCAAGAGTGATTGTTTTACCAGTTAAGGTCTTCACAAAAATCTGCA 178 Query 138614 T 138614 | Sbjct 179 T 179 >seq750760 Length=1299 Score = 100 bits (110), Expect = 3e-16 Identities = 143/196 (73%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGA 138479 |||||||| || ||||||||||| ||| | || || ||||||||| || || |||| Sbjct 328 GACTCCTTCTGGATGTTGTAGTCAGCT-AGGGTCCGGCCGTCCTCGAGCTGCTTCCCGGC 270 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA- 138538 | || || || || ||||||||||| || ||||| ||||| ||| || || | Sbjct 269 GAATATGAGGCGTTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC 210 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||||| | | |||||| | ||||||||||| | || | || ||||| || || |||| Sbjct 209 ATTGT-CGATGGTGTCAGAGGACTCCACCTCAAGGGTTATGGTCTTACCCGTTAGGGTTT 151 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 150 TCACGAAGATCTGCAT 135 >seq726932 Length=530 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||| || ||||| || | Sbjct 56 GACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCCAGCTGTTTTCCAGCG 115 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||| |||||||| || || ||||| ||||| ||| || || | | Sbjct 116 AAGATGAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTGACA 175 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||| | ||| || ||||| | || | || || || || || ||||| Sbjct 176 TTG-TCGATGGTGTCAGACGATTCAACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTT 234 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 235 CACGAAGATCTGCAT 249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 491571944910000