Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq109077 104 2e-17 seq736048 100 2e-16 >seq109077 Length=726 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| | | || || || |||||||| ||||| || ||||||||||| Sbjct 194 CCACCACGCAGACGAAGCACCAAGTGGAGGGTAGACTCTTTCTGAATGTTGTAATCAGCA 253 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| ||| | | || || | || ||||| ||| | ||||| | ||| ||||| |||| Sbjct 254 AGAGTTCGCCCATCCTCAAGCTGCTTGCCCGCGAAAATCAACCTCTGCTGGTCCGGTGGA 313 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| ||| || ||| ||| | || || ||||| | || || Sbjct 314 ATCCCCTCCTTGTCCTGAATCTTCGCTTTCACATTGTCGATGGTATCCGAGCTCTCAACC 373 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||||||||| || || || || | ||| || || || || ||||| Sbjct 374 TCTAAGGTAATTGTCTTGCCAGTTAAAGTCTTCACGAAGATCTGCAT 420 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || ||||| || || ||||| || ||||||||||| |||| ||| ||||||| Sbjct 440 ACCAAGTGAAGTGTTGACTCTTTCTGAATGTTGTAATCCGCGAGAGTTCGGCCGTCTTCC 499 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || || || ||| | |||| | ||| ||||| |||||| || ||||| || Sbjct 500 AGCTGCTTCCCTGCGAAAATCAGCCTCTGCTGGTCCGGTGGAATGCCCTCCTTATCCTGG 559 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || ||| || | || || || ||| |||| || |||| ||||| || || Sbjct 560 ATCTTAGCTTTCACGTTGTCAATGGTGTCGGAGCTTTCGACCTCTAGAGTAATTGTCTTT 619 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||||||||| |||||||| ||||| Sbjct 620 CCGGTCAGAGTTTTAACAAAAATCTGCAT 648 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 14986 TCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTAT 15045 || || || |||||||| || || | ||| | ||||| | || || |||||| | Sbjct 2 TCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCATCTTCCAGCTGCTTCCCAGCGAAG 61 Query 15046 ATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAAT 15104 ||||| | ||| || || ||| || ||||||||||| ||| ||||| ||| ||| | Sbjct 62 ATCAATCTCTGCTGATCCGGTGGGATCCCTTCCTTGTCCTGAATCTTTGC-TTTCACATT 120 Query 15105 TTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTAC 15164 || || || ||| | | || || || | || ||||| || || |||||||| || || Sbjct 121 ATCAATGGTGTCGGAACTCTCCACCTCCAGCGTGATGGTCTTCCCAGTCAGAGTCTTCAC 180 Query 15165 AAAAATTTGCATA 15177 || ||||||||| Sbjct 181 GAAGATTTGCATA 193 >seq736048 Length=1016 Score = 100 bits (110), Expect = 2e-16 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||||| ||| | | ||| || ||||||||||| || || || |||||||| || Sbjct 407 TGCCACCTCTCAAACGGAGAACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCC- 465 Query 15008 TGAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTT 15065 | ||| || | ||||| | ||||| ||||| |||| | | ||| ||||| Sbjct 466 -GCCAATGTCCGACCATCTTCCAGCTGTTTACCAGCAAATATGAGCCTCTGCTGGTCTGG 524 Query 15066 TGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTC 15125 ||||| || |||||||| ||||| ||| ||| | || || || || | | || Sbjct 525 GGGAATACCCTCCTTGTCCTGGATTTTAGCTTTCACATTATCGATGGTGTCTGAACTCTC 584 Query 15126 TACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || | |||||| ||||| || || || || || |||||||||||||| Sbjct 585 AACTTCAAGGGTAATAGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCAT 635 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 |||||||| || || || ||||| ||||| || | | ||| | ||||||| || Sbjct 205 TGAAGGGTTGATTCCTTCTGTATATTGTAGTCAGCCAAAGTTCGACCATCTTCTAGCTGC 264 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || ||||| | || | | ||| |||||| |||||| ||||||||||| ||||| Sbjct 265 TTACCAGCAAAGATTAGCCTCTGCTGGTCGGGTGGAATACCTTCCTTGTCCTGGATTTTT 324 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 ||| ||| | || || || || | | || || || | ||| || |||||||| || Sbjct 325 GCTTTCACATTGTCGATGGTGTCTGAACTCTCAACCTCAAGGGTGATAGTTTTACCAGTA 384 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| |||||||| Sbjct 385 AGGGTCTTCACAAATATTTGCAT 407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354098534995625