Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq686278 127 3e-24 seq681135 95.1 1e-14 seq728136 91.5 2e-13 >seq686278 Length=2433 Score = 127 bits (140), Expect = 3e-24 Identities = 313/464 (67%), Gaps = 18/464 (4%) Strand=Plus/Plus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACC--TGTTTCGTTATCAA 15975 ||||| || || | | || || || || || |||| ||||| |||||| || ||| Sbjct 556 TCAAGAATGTCTGCCCTGTTAGTGGCTGCAATAACAATTATACCAGTGTTTCCTT--CAA 613 Query 15976 AACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA 16035 |||||||||| || |||||||||||||||| ||||||||||| ||||||||| || | Sbjct 614 AACCATCCATTTCAGTCAAAAGCTGGTTAAGAGTTTGTTCCCTTTCATCATTTCCT--CC 671 Query 16036 TACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 16093 | | | |||| | | ||| || || |||||||| ||||||| || || ||||| Sbjct 672 TCCAATTCCAGTTCCTCTTTGGCGCCCAACAGCATCAATTTCATCAACAAATACAATGCA 731 Query 16094 TGGTTGATT-TTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAA 16152 || ||| | | | | ||| ||| ||||| || || | || || ||||||| Sbjct 732 GGGAGCATTCTCCTTGGCCTTCTTGAAA-AGATCACGGACTCTAGATGCACCAACACCAA 790 Query 16153 CAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCC 16211 |||||||||| ||||| | | | | | || | || || || ||| | |||||| Sbjct 791 CAAACATCTCAACAAACTCAGAACCTG-AGATAGAGAAAAATGGAACACCTGCTTCACCA 849 Query 16212 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 16271 ||||| || || || |||||||| || || ||||| || | || || ||||| Sbjct 850 GCAATTGCCTTAGCTAGCAGAGTCTTCCCAGTTCCTGGAGGGCCAACAAGAAGAACACCT 909 Query 16272 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATC 16331 ||||| || ||| | || | ||||||| || | || ||||| ||||| | Sbjct 910 TTAGGAATGCGAGCTCCAACTGCAGTGAATCTCTCGGGCTTTTTCAGAAACTCCACTA-- 967 Query 16332 TCTTCC---AATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 16372 ||||| || || | ||| || | || | ||| ||||||| Sbjct 968 -CTTCCATGAAATCTTGTTTTGCTTCATCTACCCCAGCAACATC 1010 >seq681135 Length=1827 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 ||||||| || || || ||||||| || || || || || ||||||||||| || || Sbjct 731 CCTTTGCCGAACGCCTGCTCGCATTCGCCTGCGTGGAAGGCATCTTCTTCTCCGGAAGCT 672 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 ||||| | || | ||||| ||||| || ||||||||||| || | ||||| || | Sbjct 671 TCTGCTCGATATTCTGGCTAAAGAAACGCGGTCTCATGCCGGGATTAACTTTCTCAAATG 612 Query 102292 AGCTTATCTCTCGTGACGAGGG 102313 || | ||||| || |||||||| Sbjct 611 AGTTAATCTCGCGAGACGAGGG 590 >seq728136 Length=2057 Score = 91.5 bits (100), Expect = 2e-13 Identities = 188/280 (67%), Gaps = 10/280 (4%) Strand=Plus/Minus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 || ||||||||||||||||| ||||| || || ||||| || | ||||||||| | Sbjct 1814 AATCCATCCATCTCTGTCAACAGCTGATTGATGGTTTGCTCTCTCTCATCATTCCCACCT 1755 Query 16035 ATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 16094 | ||| || | | ||| | ||||| |||||||| ||||||||||| || ||||| Sbjct 1754 CCAAGACCTGCCCCTCTCTGCCTCCCCACTGCATCAATTTCATCAATGAACACAATGCAG 1695 Query 16095 GG-----TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACAC 16149 || |||||||| || ||||| | ||||| || | || ||||| | Sbjct 1694 GGTGCCTTTGATTTT-----GCCTTCTCAAACAAGTCCCGGACTCTGGATGCTCCCACTC 1640 Query 16150 CAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCAC 16209 | ||||||| || || || | | ||| | || || ||| || ||| | ||| | Sbjct 1639 CTACAAACAATTCAACGAATTCAGAGGCTGCGCACGAGAAGAATGGCACACCTGCTTCTC 1580 Query 16210 CCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 | || | |||| ||| || || ||||| || || || || Sbjct 1579 CGGCCACTGCTCTGGCCAGTAGGGTCTTGCCGGTTCCGGG 1540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614875414410000