Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq551508 289 3e-73 seq516297 284 1e-71 seq545415 183 3e-41 seq345357 165 9e-36 seq616439 143 3e-29 seq717558 129 6e-25 seq31918 111 2e-19 seq589273 102 9e-17 seq455454 98.7 1e-15 seq493281 82.4 8e-11 >seq551508 Length=510 Score = 289 bits (320), Expect = 3e-73 Identities = 355/485 (73%), Gaps = 0/485 (0%) Strand=Plus/Plus Query 162712 TACATGGGACGTGAATGGGAACTCTCTTACCGTCTTGGTATGCGTCCATGGATCTGCGTA 162771 |||||||| ||||| |||||||| || |||||| | |||||| || ||||| || Sbjct 18 TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGCTATGCGCCCTTGGATTGTTGTT 77 Query 162772 GCATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCCTGGTCTATCCTTTCGGTCAA 162831 ||||| || || ||||||||||| || | || | ||| || |||| || | |||||| Sbjct 78 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTATTTTCTTGATCTACCCAATTGGTCAA 137 Query 162832 GGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTACATTCAACTACATGCTTGTC 162891 || || | ||| | ||||| | | ||| |||||| ||||||| |||| |||| Sbjct 138 GGAAGCTTTTATGATGGTATGCCTCTAGAAATCTCTGGTACTTTCAACTTCATGATTGTA 197 Query 162892 TTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGTC 162951 ||||| | ||||||||||| || ||||| || ||||||||||| | ||| || ||||| Sbjct 198 TTCCAGGTTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGATGTAGCTGGTGTA 257 Query 162952 TTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGT 163011 ||||| ||||| || ||||| || ||||| ||||| ||||| || ||| | | | Sbjct 258 TTCGGCGGTTCCCTATTCAGAGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATAAGG 317 Query 163012 GAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACA 163071 || || || ||| ||| || || |||||||| ||||||||||| ||||| || Sbjct 318 GAAACCACAAAAAATGAATCTGCTAATGCAGGTTACAAATTCGGTCAAGAGGAAGAAACT 377 Query 163072 TACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCATTC 163131 || || || || || || | ||||| || || || ||||| ||||||||||| ||| Sbjct 378 TATAATATTGTGGCTGCTCCAGGTTATTTTGGCCGATTGATATTCCAATATGCTAGTTTC 437 Query 163132 AACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTC 163191 || || || |||| || | |||||||| ||||| |||||||| || || ||||||||| Sbjct 438 AATAATTCATGTTCTTTAAATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTC 497 Query 163192 ACCGC 163196 || || Sbjct 498 ACTGC 502 >seq516297 Length=515 Score = 284 bits (314), Expect = 1e-71 Identities = 375/517 (73%), Gaps = 5/517 (1%) Strand=Plus/Minus Query 162841 TCTGACGCAATGCCCTTGGGTATCAGTGGTACATTCAACTACATGCTTGTCTTCCAAGCA 162900 ||||| | ||||| | || ||| |||||| ||||||| |||| |||| ||| | || Sbjct 515 TCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCTAGGCT 456 Query 162901 GAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGTCTTCGGTGGT 162960 ||||||||||| || ||||| | ||||||||||||| | | ||||| || |||||| Sbjct 455 GAGCACAACATCCTTATGCACTCATTCCACATGTTGGCA-TAGTTGGTGTATTTGGTGGT 397 Query 162961 TCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACT 163020 || || ||||||| ||||| ||||| ||||| || ||| | | | || || | Sbjct 396 TCCCTATTCAGTGTTATGCATGGTTCATTGGTAACCTCTAGTTTGATTAGGGAAACCATA 337 Query 163021 GAAACTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACATACAACATC 163080 |||| ||| || ||| ||||||| |||| |||||| ||||| || || || || Sbjct 336 GAAAATGAATCTGCGAATGTAGGTTACACATTCGATCAAGATGAAGAAACTTATAATATT 277 Query 163081 GTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCC 163140 || || |||||||| | ||||| ||||| ||||||||||| |||||| || || Sbjct 276 ACGGCTGCTCATGGTTATTCTGGTCGATTGATTTTCCAATATGCTATATTCAATAATTCT 217 Query 163141 CGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTT 163200 ||||| || || |||||||| | ||| |||||| | || || |||||||||| | ||| Sbjct 216 CGTTCTTTACATTTCTTCCTAGTTGCTTGGCCTATAGTAGGTATCTGGTTCATTG--CTT 159 Query 163201 GGCGTGTCA--ACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTG 163258 || ||| || || | ||| |||| || |||||||| |||||||| || || ||| Sbjct 158 TAGGTATCAACACTCTGACTTTCTACCTAAATGGTTTCAATTTCAACCAATCTATAGTTG 99 Query 163259 ATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGACGTTCTGAACCGTGCAGGTTTGGGTA 163318 || |||| ||| |||| | || || | ||| || || | || ||||| | |||| Sbjct 98 ATAGTCAAGGTTGTGTAATTAATACTTAGGCTGATATTATAAATCGTGCTAACCTTGGTA 39 Query 163319 TGGAAGTTATGCACGAGCGCAATGCTCACAACTTCCC 163355 ||||||||||||| || || |||||||| || ||||| Sbjct 38 TGGAAGTTATGCATGAACGTAATGCTCATAATTTCCC 2 >seq545415 Length=298 Score = 183 bits (202), Expect = 3e-41 Identities = 218/296 (74%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 163051 TTCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTG 163110 ||||||||||| ||||| || || || || || || || |||||||| || || | ||| Sbjct 1 TTCGGTCAAGAGGAAGAAACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCTGATTG 60 Query 163111 ATCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGG 163170 |||||| ||||||| ||| | || || ||||| || || |||||| | ||||| ||| Sbjct 61 ATCTTCTAATATGCTAGTTTCTATAATTCTCGTTCTTTACATTTCTTCATAGCTGCTTGG 120 Query 163171 CCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAAC 163230 | ||| || || |||||||||| || | || | || ||| | |||||||| || Sbjct 121 CTTGTAGTAGGTATCTGGTTCATTGCTTTAGGTATCGGCACTATGACTTTCAACCTAAAT 180 Query 163231 GGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCA 163290 |||||||| || ||||| || || ||||| | || |||||||| | || || ||||| Sbjct 181 GGTTTCAATTTTAACCAATCTATAGTTGATAGCCAAGGTCGTGTAATTAATACTTGGGCT 240 Query 163291 GACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAATGCTCA 163346 || || | |||||||| | ||||||||||||||||| || | |||||||| Sbjct 241 GATTTTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAATGTAATGCTCA 296 >seq345357 Length=322 Score = 165 bits (182), Expect = 9e-36 Identities = 217/297 (73%), Gaps = 4/297 (1%) Strand=Plus/Minus Query 163963 CAATTTGAACTTGCTCGC-CTGATTGGAATCAGACCCTACAATGCGATTGCTTTCTCTGG 164021 ||||| ||||||||||| ||| || | | |||| || ||||| || || || ||| Sbjct 321 CAATTCGAACTTGCTCGATCTG-TTCAATTGCGACCTTATAATGCAATCGCATTATCTAT 263 Query 164022 TCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTGGTT 164081 ||| |||| ||| || ||| ||| || || || || || ||||| || ||||||| Sbjct 262 TCCAATTGTTGTTTTTGTTTCTGTAC--CTAATTTATCCACTAGGTCAGTCTGGTTGGTT 205 Query 164082 CTTCGCTCCATCTTTTGGAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGGATT 164141 ||| | || |||||| | ||| | || || ||||| || | || | ||||| || Sbjct 204 CTTTGTGCCTAGTTTTGGTATAGCATCTATATTTTGATTCATCCTCTTTTTCCAAGGGTT 145 Query 164142 TCATAACTGGACTTTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGC 164201 |||||| ||||| |||||||| || |||||||||||||||| ||| || | |||| || Sbjct 144 TCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGTCGGTGTATTGGGCGTTGC 85 Query 164202 ATTGCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGA 164258 |||||| |||||||| || | || ||||||||||| || | ||||||||| || Sbjct 84 TCTGCTATGCGCTATTCATGGTGCTACCGTTGAAAATACTTTATTTGAAGATGGTGA 28 >seq616439 Length=1776 Score = 143 bits (158), Expect = 3e-29 Identities = 238/344 (69%), Gaps = 0/344 (0%) Strand=Plus/Plus Query 162838 TTCTCTGACGCAATGCCCTTGGGTATCAGTGGTACATTCAACTACATGCTTGTCTTCCAA 162897 |||| ||| | ||||| || || ||| | |||| ||||||| |||| |||| ||| | Sbjct 185 TTCTATGATGATATGCCTTTAGGAATCTCTAGTACTTTCAACTTCATGATTGTATTCTAG 244 Query 162898 GCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGTCTTCGGT 162957 | ||||||||||| || ||||| | |||||| |||| ||||| | ||||| || | | Sbjct 245 GTTGAGCACAACATCCTTATGCACCTATTCCACTTGTTAGGTGTAGTTGGTGTATTTGAT 304 Query 162958 GGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACG 163017 | || | |||| || ||||| |||| ||||| || | | | || || || Sbjct 305 GAGTCTTTATTCAATGTTATGCATGGTTTCTTGGTAACCTTTAGTTTGATCAAGGAAACC 364 Query 163018 ACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACATACAAC 163077 || ||| ||| | || || |||||||| |||| |||||| ||||| || || || Sbjct 365 ACAAAAAATGAATTTGTTAATTAAGGTTACAAATTCGATCAAGATGAAGAAACTTATAAT 424 Query 163078 ATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCATTCAACAAC 163137 ||||| | || |||||||| || |||| ||||| || ||||||| || | | Sbjct 425 ATCGTAGTTGCTCATGGTTATTTTAGTCGATTGATTTTTCAATATGGTAGTTTGGATATT 484 Query 163138 TCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGG 163181 || ||||| || || |||||| | | || |||| ||| || || Sbjct 485 TCTCGTTCTTTACATTTCTTCATAGTTGTTTGGCATGTAGTAGG 528 >seq717558 Length=1667 Score = 129 bits (142), Expect = 6e-25 Identities = 259/381 (68%), Gaps = 6/381 (2%) Strand=Plus/Plus Query 162862 ATCAGTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCAT 162921 || |||| || || |||| |||| |||| ||| ||||| | |||||| || ||||| Sbjct 1051 ATTAGTGCCACTTTTAACTTCATGATTGTATTCTAAGCAAAATGCAACATCCTTATGCAC 1110 Query 162922 CCCTTCCACATGTTGGGTGTCGCAGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCAC 162981 | ||||||||||| | ||| ||| | ||||| ||||| | || | || ||||| Sbjct 1111 TCATTCCACATGTTCGTTGTACTTGGTATATTCGGAGGTTCCCCATTTAATGTTATGCAT 1170 Query 162982 GGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTAT 163041 ||||||||||| || | || | | | | || || ||| ||| | | || | Sbjct 1171 GGTTCTTTGGTAACCT-TTAGTTTGATAGGGTAACCACAAAAAATGAATATCCTAATGAA 1229 Query 163042 GGTTACAAGTTCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTTC 163101 ||||| | || |||||||| ||||| || || | || || | | ||||||| || Sbjct 1230 GGTTAAATATTTGGTCAAGAGGAAGAAACTTATACTATTGTGGTTGATTATGGTTATTTT 1289 Query 163102 GGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTC--- 163158 || || ||| | | ||||||||| ||||| || || | || || || |||||| Sbjct 1290 GGCCGATTGGT-TACCAATATGCTAGTTTCAATAATTCACATTTTTTACATTTCTTCCCA 1348 Query 163159 -CTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGC 163217 || ||| | ||| |||| || || |||| |||||| | | ||| | || ||||| Sbjct 1349 GCTAGCTACTTGGACTGTAGTAGGTATCTAGTTCACTACTTTAGGCATCAGCACTATGGC 1408 Query 163218 ATTCAACCTGAACGGTTTCAA 163238 |||||||| || |||||||| Sbjct 1409 TTTCAACCTAAATGGTTTCAA 1429 >seq31918 Length=273 Score = 111 bits (122), Expect = 2e-19 Identities = 159/220 (72%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 163942 CTCATTGGTTTCATGCTTCGGCAATTTGAACTTGCTCG-CCTGATTGGAATCAGACCCTA 164000 || || ||||||||| | || ||||||||||||||||| ||| || | | |||| || Sbjct 219 CTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTG-TTTAATTGCGACCTTA 161 Query 164001 CAATGCGATTGCTTTCTCTGGTCCTATTGCTG-TCTTCGTTAGTGTCTTTCTCATCTACC 164059 ||||| ||||| |||||| ||| || |||| | || ||| ||| || || || || | Sbjct 160 TAATGCAATTGCATTCTCTACTCCAATCGCTGTTTTTTGTTTTTGTATTCCTAATTTATC 101 Query 164060 CTCTGGGTCAATCAAGTTGGTTCTTCGCTCCATCTTTTGGAGTGGCAGCAATCTTCAGAT 164119 | || |||| || ||| ||||| | || |||||| || | ||| || || ||| Sbjct 100 CACTAAGTCAGTCTGGTTAATTCTTTACGCCTAGTTTTGGTGTAGTAGCTATATTTCGAT 41 Query 164120 TCCTCTTATTCCTTCAAGGATTTCATAACTGGACTTTGAA 164159 || || | || | ||||| |||||||| ||||| ||||| Sbjct 40 TCATCCTCTTTTTCCAAGGGTTTCATAATTGGACGTTGAA 1 >seq589273 Length=208 Score = 102 bits (112), Expect = 9e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 164317 GTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGG 164376 ||||| || ||| |||| ||||| || ||||| || ||||| ||||| || || | ||| Sbjct 1 GTCACCGCTAACTGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAATGTTGG 60 Query 164377 CTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATT 164436 | ||||| || ||||| ||||| || || | | | |||||| || |||| | Sbjct 61 TTACATTTCTTTATGTTATTTGTACCAGTAACCGATTTATGGATGAGTGCTTTTGGAGTA 120 Query 164437 ATTGGCCTTGCTCTCAATCTTCGTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCA 164496 | || || ||| | || | ||||| || || ||||| || || || | ||||| Sbjct 121 GTCGGTCTGGCTTTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGTGCAGCG 180 Query 164497 GAAGATCCTGAGTTCGAGACTTTCTA 164522 ||||||||||| || ||||||||||| Sbjct 181 GAAGATCCTGAATTTGAGACTTTCTA 206 >seq455454 Length=251 Score = 98.7 bits (108), Expect = 1e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 162887 TTGTCTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAG 162946 |||| ||||| || ||||||||||| || ||||| || ||||||||||| || | | | Sbjct 2 TTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCTTAGTTG 61 Query 162947 GTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTAC 162995 |||| |||| ||||| || ||||||| ||||||||||| ||||| || Sbjct 62 GTGTATTCGACGGTTCCCTATTCAGTGTTATGCACGGTTCCTTGGTAAC 110 >seq493281 Length=200 Score = 82.4 bits (90), Expect = 8e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 162528 TGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCC 162587 |||||| || |||| || || | ||||| ||||| || ||||||||||| | |||| Sbjct 200 TGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATCTCTGGTGCCATCATTCC 141 Query 162588 ATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGA 162647 |||| || || ||| | ||||| || || || | |||||| |||| ||||||| Sbjct 140 TACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATAGGAAGCAACATCCGTTGATGA 81 Query 162648 GTGGCTGTATAACGGTGGTCCTT 162670 ||| | || || |||||||||| Sbjct 80 ATGGTTATACAATGGTGGTCCTT 58 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552313959975000