Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq551508 257 2e-63 seq516297 244 2e-59 seq616439 174 2e-38 seq545415 120 4e-22 seq711014 109 8e-19 seq455454 105 1e-17 seq493281 98.7 1e-15 seq753951 93.3 6e-14 >seq551508 Length=510 Score = 257 bits (284), Expect = 2e-63 Identities = 340/472 (72%), Gaps = 0/472 (0%) Strand=Plus/Plus Query 215634 AGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCAC 215693 ||||||||||| || | | | | |||| | |||||||| |||||| || || || | Sbjct 31 AGTGGGAACTTAGTTTCCGTCTGGCTATGCGCCCTTGGATTGTTGTTGCATATTCAGCTC 90 Query 215694 CTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTG 215753 |||| | ||||| ||| | ||| | | || ||| | ||||| || || | || Sbjct 91 CTGTTGCAGCTGCTACTGCTATTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTATG 150 Query 215754 ATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGC 215813 ||| |||||| || | ||||||||| || ||||||| |||| |||| ||||||| ||||| Sbjct 151 ATGGTATGCCTCTAGAAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGTTGAGC 210 Query 215814 ACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCAT 215873 ||||||| || |||||||||||||||||||||| ||| |||||||| ||||| ||||| Sbjct 211 ACAACATCCTTATGCACCCATTCCACATGTTAGATGTAGCTGGTGTATTCGGCGGTTCCC 270 Query 215874 TGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGC 215933 | ||| || ||||| ||||| | || || ||| | | || || || || || | Sbjct 271 TATTCAGAGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATAAGGGAAACCACAAAAA 330 Query 215934 AAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAG 215993 | |||||| || |||||||| ||||| |||||||| ||||| || || || || | Sbjct 331 ATGAATCTGCTAATGCAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTGG 390 Query 215994 CTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAA 216053 |||| | ||||| ||||| || | || |||||||| || |||||| || ||| | Sbjct 391 CTGCTCCAGGTTATTTTGGCCGATTGATATTCCAATATGCTAGTTTCAATAATTCATGTT 450 Query 216054 GTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAACTGC 216105 | | | |||||||| || || | ||||| | |||||||| ||||| Sbjct 451 CTTTAAATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGC 502 >seq516297 Length=515 Score = 244 bits (270), Expect = 2e-59 Identities = 364/515 (71%), Gaps = 1/515 (0%) Strand=Plus/Minus Query 215750 TCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCT 215809 ||||||| |||||| || ||||||||||| || ||||||| |||| |||| ||| ||||| Sbjct 515 TCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCTAGGCT 456 Query 215810 GAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGT 215869 ||||||||||| || |||||| ||||||||||||| || | | |||||| || |||||| Sbjct 455 GAGCACAACATCCTTATGCACTCATTCCACATGTT-GGCATAGTTGGTGTATTTGGTGGT 397 Query 215870 TCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACT 215929 || | ||| || ||||| |||||| | || || ||| | | || || || || | Sbjct 396 TCCCTATTCAGTGTTATGCATGGTTCATTGGTAACCTCTAGTTTGATTAGGGAAACCATA 337 Query 215930 GAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATC 215989 || | |||||| ||| ||||||| |||| ||||| || ||||| || || || Sbjct 336 GAAAATGAATCTGCGAATGTAGGTTACACATTCGATCAAGATGAAGAAACTTATAATATT 277 Query 215990 GTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCA 216049 ||||| || ||||| | |||||| | || |||||||| || ||||| || || Sbjct 276 ACGGCTGCTCATGGTTATTCTGGTCGATTGATTTTCCAATATGCTATATTCAATAATTCT 217 Query 216050 AGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAACTGCAATG 216109 | | | || |||||||| | || | ||| | | |||||||| | ||| | Sbjct 216 CGTTCTTTACATTTCTTCCTAGTTGCTTGGCCTATAGTAGGTATCTGGTTCATTGCTTTA 157 Query 216110 GGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGAC 216169 ||| || ||| || | ||| |||| || |||||||| |||||||| ||| | || || Sbjct 156 GGTATCAACACTCTGACTTTCTACCTAAATGGTTTCAATTTCAACCAATCTATAGTTGAT 97 Query 216170 GCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATG 216229 ||| || ||| ||||| ||| || || | || | || ||||||||| Sbjct 96 AGTCAAGGTTGTGTAATTAATACTTAGGCTGATATTATAAATCGTGCTAACCTTGGTATG 37 Query 216230 GAAGTAATGCACGAGCGTAACGCTCACAACTTCCC 216264 ||||| ||||| || ||||| ||||| || ||||| Sbjct 36 GAAGTTATGCATGAACGTAATGCTCATAATTTCCC 2 >seq616439 Length=1776 Score = 174 bits (192), Expect = 2e-38 Identities = 209/284 (74%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 215747 TTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCAG 215806 |||| ||||| |||||| | ||||||||| | || ||||||| |||| |||| ||| || Sbjct 185 TTCTATGATGATATGCCTTTAGGAATCTCTAGTACTTTCAACTTCATGATTGTATTCTAG 244 Query 215807 GCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGT 215866 | |||||||||||| || ||||||| ||||||| |||||||||| | |||||| || | | Sbjct 245 GTTGAGCACAACATCCTTATGCACCTATTCCACTTGTTAGGTGTAGTTGGTGTATTTGAT 304 Query 215867 GGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACA 215926 | || || ||| || ||||| |||| | || || | | | | |||| || || Sbjct 305 GAGTCTTTATTCAATGTTATGCATGGTTTCTTGGTAACCTTTAGTTTGATCAAGGAAACC 364 Query 215927 ACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAAC 215986 || | | |||| | || || |||||||| |||| ||||| || ||||| || || Sbjct 365 ACAAAAAATGAATTTGTTAATTAAGGTTACAAATTCGATCAAGATGAAGAAACTTATAAT 424 Query 215987 ATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATA 216030 ||||||| ||| || ||||| ||| |||| | || || ||||| Sbjct 425 ATCGTAGTTGCTCATGGTTATTTTAGTCGATTGATTTTTCAATA 468 >seq545415 Length=298 Score = 120 bits (132), Expect = 4e-22 Identities = 204/296 (69%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 215960 TTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTC 216019 ||||| |||||||| ||||| || || || || ||||| || ||||| ||||| | | Sbjct 1 TTCGGTCAAGAGGAAGAAACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCTGATTG 60 Query 216020 ATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTC 216079 |||||| |||| || |||| | || || | | | || |||||| | || || | Sbjct 61 ATCTTCTAATATGCTAGTTTCTATAATTCTCGTTCTTTACATTTCTTCATAGCTGCTTGG 120 Query 216080 CCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAAC 216139 | ||| | |||||||| | ||| | ||| || |||||| | |||||||| || Sbjct 121 CTTGTAGTAGGTATCTGGTTCATTGCTTTAGGTATCGGCACTATGACTTTCAACCTAAAT 180 Query 216140 GGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCA 216199 |||||||| || ||||| ||| | || || ||| || ||| ||||||||| Sbjct 181 GGTTTCAATTTTAACCAATCTATAGTTGATAGCCAAGGTCGTGTAATTAATACTTGGGCT 240 Query 216200 GACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCA 216255 || || | ||| | || |||||||||||||| ||||| || |||| ||||| Sbjct 241 GATTTTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAATGTAATGCTCA 296 >seq711014 Length=229 Score = 109 bits (120), Expect = 8e-19 Identities = 74/83 (89%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 215765 CTTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTG 215824 || ||||||||||| || ||||||| ||| |||| |||||||||||||||||||| || Sbjct 146 CTAGGAATCTCTGGTACCTTCAACTTCATTATTGTATTCCAGGCTGAGCACAACATCCTT 205 Query 215825 ATGCACCCATTCCACATGTTAGG 215847 ||||||||||||||||||||||| Sbjct 206 ATGCACCCATTCCACATGTTAGG 228 >seq455454 Length=251 Score = 105 bits (116), Expect = 1e-17 Identities = 89/108 (82%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 215796 TTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCTG 215855 |||| |||||||||||||||||||| || ||||||||||||||||||||||| | | || Sbjct 2 TTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCTTAGTTG 61 Query 215856 GTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTA 215903 |||| |||| ||||| | ||| || ||||||||||| |||| || Sbjct 62 GTGTATTCGACGGTTCCCTATTCAGTGTTATGCACGGTTC-CTTGGTA 108 >seq493281 Length=200 Score = 98.7 bits (108), Expect = 1e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 215438 GAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTACCT 215497 || || ||| |||| ||| || | ||||| ||||| || ||||||||||| | | ||| Sbjct 199 GAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATCTCTGGTGCCATCATTCCT 140 Query 215498 AGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGACGAA 215557 | ||| || || || || ||||| ||||| || | ||||||| || | ||||| ||| Sbjct 139 ACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATAGGAAGCAACATCCGTTGATGAA 80 Query 215558 TGGCTCTACAATGGTGGACCTT 215579 ||| | ||||||||||| |||| Sbjct 79 TGGTTATACAATGGTGGTCCTT 58 >seq753951 Length=5828 Score = 93.3 bits (102), Expect = 6e-14 Identities = 77/94 (82%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 215747 TTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCAG 215806 || ||| ||| |||| | || ||| | ||||| || ||||||| |||| |||| |||||| Sbjct 1666 TTTTCTAATGGTATGTCTCTAGGACTTTCTGGTACTTTCAACTTCATGATTGTATTCCAG 1607 Query 215807 GCTGAGCACAACATTCTGATGCACCCATTCCACA 215840 |||||| ||| ||||| |||||||||||||||| Sbjct 1606 GCTGAGTACATCATTCCTATGCACCCATTCCACA 1573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738039414690000