Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq551508 269 3e-67 seq516297 253 2e-62 seq545415 168 8e-37 seq717558 131 2e-25 seq616439 129 7e-25 seq753951 100 3e-16 seq711014 93.3 5e-14 seq161073 93.3 5e-14 seq493281 82.4 9e-11 >seq551508 Length=510 Score = 269 bits (298), Expect = 3e-67 Identities = 352/485 (73%), Gaps = 4/485 (1%) Strand=Plus/Plus Query 170017 TACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTA 170076 ||||||||| | |||||||||| | |||| | | |||||| |||||||| ||| Sbjct 18 TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGCTATGCGCCCTTGGATTGTTGTT 77 Query 170077 GCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAG 170136 |||||||| ||||| || |||| || ||| | ||||| | || || | ||||| Sbjct 78 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTATTTTCTTGATCTACCCAATTGGTCAA 137 Query 170137 GGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTA 170196 ||| || | || || |||||||||| ||||| ||||| || ||||||||| | ||| Sbjct 138 GGAAGCTTTTATGATGGTATGCCTCTAGAAATCTCTGGTACTTTCAACTTCATGATTGTA 197 Query 170197 TTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATGGCAGGGGTTGCTGGTATG 170256 ||||| | ||||||||||| ||||||||||||||||| ||| || || |||||| | Sbjct 198 TTCCAGGTTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGATGTAGCTGGTGTA 257 Query 170257 TTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGA 170316 ||||| || | || ||| ||| ||||| ||||| | ||||| ||| | | || || Sbjct 258 TTCGGCGGTTCCCTATTCAGAGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATAAGG 317 Query 170317 GAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACA 170376 || || ||| | || || || || || ||||||||||| ||||| |||||||| Sbjct 318 GAAACCACAAAAAATGAATCTGCTAATGCAGGTTACAAATTCGGTCAAGAGGAAGAAACT 377 Query 170377 TACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTT 170436 || || ||||| || || | || || ||||| || | || |||||||||||||| || Sbjct 378 TATAATATTGTGGCTGCTCCAGGTTATTTTGGCCGATTGATATTCCAATATGCTAGTTTC 437 Query 170437 AACAATAGTCGTAGTCTT--CACTTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGT 170494 || ||| || | |||| | |||||||| ||| | | ||||||||| | ||||||| Sbjct 438 AATAAT--TCATGTTCTTTAAATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGT 495 Query 170495 TAACT 170499 | ||| Sbjct 496 TCACT 500 >seq516297 Length=515 Score = 253 bits (280), Expect = 2e-62 Identities = 366/515 (71%), Gaps = 1/515 (0%) Strand=Plus/Minus Query 170146 TCAGACGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCA 170205 || || || ||||||||||| ||||| ||||| || ||||||||| | |||||| | || Sbjct 515 TCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCTAGGCT 456 Query 170206 GAGCACAACATTCTTATGCACCCATTCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGA 170265 ||||||||||| ||||||||| ||||||| ||| || | | |||| | || || || Sbjct 455 GAGCACAACATCCTTATGCACTCATTCCACATGTT-GGCATAGTTGGTGTATTTGGTGGT 397 Query 170266 GCACTCTTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACA 170325 | || ||| | ||||| |||||| | ||||| ||| | | || || || || | | Sbjct 396 TCCCTATTCAGTGTTATGCATGGTTCATTGGTAACCTCTAGTTTGATTAGGGAAACCATA 337 Query 170326 GATAACGAGTCACAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATT 170385 || || || || ||| || |||| ||||| ||||| |||||||| || || ||| Sbjct 336 GAAAATGAATCTGCGAATGTAGGTTACACATTCGATCAAGATGAAGAAACTTATAATATT 277 Query 170386 GTTGCAGCACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGT 170445 || || ||||| || | |||| || | || ||||||||||||| || || ||| | Sbjct 276 ACGGCTGCTCATGGTTATTCTGGTCGATTGATTTTCCAATATGCTATATTCAATAATTCT 217 Query 170446 CGTAGTCTTCACTTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATG 170505 ||| | | || |||||||| | | | | ||| ||||| | |||||||| | | | | Sbjct 216 CGTTCTTTACATTTCTTCCTAGTTGCTTGGCCTATAGTAGGTATCTGGTTCATTGCTTTA 157 Query 170506 GGTATTTGCACAATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGAT 170565 ||||| ||| || | || |||| ||||| || || |||||||| || || || ||| Sbjct 156 GGTATCAACACTCTGACTTTCTACCTAAATGGTTTCAATTTCAACCAATCTATAGTTGAT 97 Query 170566 GGATCTGGTAAAGTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATG 170625 | ||| ||| || ||| | ||| || || | || | || ||||| |||||| Sbjct 96 AGTCAAGGTTGTGTAATTAATACTTAGGCTGATATTATAAATCGTGCTAACCTTGGTATG 37 Query 170626 GAAGTAATGCATGAGCGTAATGCACACAACTTCCC 170660 ||||| |||||||| |||||||| || || ||||| Sbjct 36 GAAGTTATGCATGAACGTAATGCTCATAATTTCCC 2 >seq545415 Length=298 Score = 168 bits (186), Expect = 8e-37 Identities = 215/296 (73%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 170356 TTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTT 170415 ||||| ||||| |||||||| || || ||||| || || ||||| || ||||| || | Sbjct 1 TTCGGTCAAGAGGAAGAAACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCTGATTG 60 Query 170416 ATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTC 170475 |||||| |||||||||| || | ||| |||| | | || |||||| | ||| | | Sbjct 61 ATCTTCTAATATGCTAGTTTCTATAATTCTCGTTCTTTACATTTCTTCATAGCTGCTTGG 120 Query 170476 CCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAAT 170535 | ||||||| | |||||||| | | | | ||||| |||| ||| | || ||||| ||| Sbjct 121 CTTGTAGTAGGTATCTGGTTCATTGCTTTAGGTATCGGCACTATGACTTTCAACCTAAAT 180 Query 170536 GGATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCA 170595 || || || || ||||| || || || ||| | ||| ||| || ||| ||||| Sbjct 181 GGTTTCAATTTTAACCAATCTATAGTTGATAGCCAAGGTCGTGTAATTAATACTTGGGCT 240 Query 170596 GACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACA 170651 || || | ||| | || ||||| ||||||||||| |||||||| ||||||| || Sbjct 241 GATTTTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAATGTAATGCTCA 296 >seq717558 Length=1667 Score = 131 bits (144), Expect = 2e-25 Identities = 388/594 (65%), Gaps = 7/594 (1%) Strand=Plus/Plus Query 169954 TGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTCCTTATCGGAATCTCT 170013 ||||| || || ||||||| |||| | || || | | || || | | || || || Sbjct 839 TGGTTATACAATGGTGGTCTTTATGAGCTAATTGTTCTACAATTTTTACTTGGTATAGCT 898 Query 170014 GCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATGCGTCCTTGGATCTGT 170073 ||||||||| | ||||| | || | || | |||||||||| |||| || | | Sbjct 899 TGTTACATGGGTCGTGAGTGGAAGCTTAGTTTCCATCTAGGTATGCGCCCTTAGAACGTT 958 Query 170074 GTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGT 170133 || |||||||| || || || | | | | | |||||| | | || | ||| Sbjct 959 GTTACATATTCTT-TCTTGTTACATCTACTACTGTTATTTTCTTAATCTGCCCAATTGGT 1017 Query 170134 CAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTC 170193 | || ||| | | || ||||||||| || | || |||||||||||| | Sbjct 1018 TAAAGAAATTTTTTTAATGGTTTGCCTCTAGTAATTAGTGCCACTTTTAACTTCATGATT 1077 Query 170194 GTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATGGCAGGGGTTGCTGGT 170253 |||||| ||||| | |||||| ||||||||| ||||||| ||| | || |||| Sbjct 1078 GTATTCTAAGCAAAATGCAACATCCTTATGCACTCATTCCACATGTTCGTTGTACTTGGT 1137 Query 170254 ATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCTAATC 170313 || |||||||| | | || | ||||| ||||| | ||||| | | | | || Sbjct 1138 ATATTCGGAGGTTCCCCATTTAATGTTATGCATGGTTCTTTGGTAACCTTTAGTTTGAT- 1196 Query 170314 AGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTCGGACAAGAAGAAGAA 170373 || | || ||| | || || | | || | || || | ||| || ||||| |||||| Sbjct 1197 AGGGTAACCACAAAAAATGAATATCCTAATGAAGGTTAAATATTTGGTCAAGAGGAAGAA 1256 Query 170374 ACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGC 170433 || || | ||||| | | |||| || ||||| || || | |||||||||||| Sbjct 1257 ACTTATACTATTGTGGTTGATTATGGTTATTTTGGCCGA-TTGGTTACCAATATGCTAGT 1315 Query 170434 TTTAACAATAGTCGTAGTCTTCACTTCTTC----CTTGCTACATTCCCTGTAGTATGCAT 170489 || || ||| | | | | || |||||| || ||||| | |||||||| | || Sbjct 1316 TTCAATAATTCACATTTTTTACATTTCTTCCCAGCTAGCTACTTGGACTGTAGTAGGTAT 1375 Query 170490 CTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGATTTAA 170543 || ||| ||| | | || || |||| ||||| || ||||| ||||| || || Sbjct 1376 CTAGTTCACTACTTTAGGCATCAGCACTATGGCTTTCAACCTAAATGGTTTCAA 1429 >seq616439 Length=1776 Score = 129 bits (142), Expect = 7e-25 Identities = 216/310 (70%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 170155 ATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCACAAC 170214 |||||| |||| ||||| |||| || ||||||||| | |||||| | | ||||||||| Sbjct 197 ATGCCTTTAGGAATCTCTAGTACTTTCAACTTCATGATTGTATTCTAGGTTGAGCACAAC 256 Query 170215 ATTCTTATGCACCCATTCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGAG-CACTCTT 170273 || |||||||||| |||||| || ||| || | |||| | || || ||| | | || Sbjct 257 ATCCTTATGCACCTATTCCACTTGTTAGGTGTAGTTGGTGTATT-TGATGAGTCTTTATT 315 Query 170274 CTCAGCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAACGA 170333 | | ||||| |||| | ||||| | | | | |||| || || ||| | || || Sbjct 316 CAATGTTATGCATGGTTTCTTGGTAACCTTTAGTTTGATCAAGGAAACCACAAAAAATGA 375 Query 170334 GTCACAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGC 170393 | || || || |||||||||| ||||| |||||||| || || || || | || Sbjct 376 ATTTGTTAATTAAGGTTACAAATTCGATCAAGATGAAGAAACTTATAATATCGTAGTTGC 435 Query 170394 ACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCT 170453 ||||| || ||| || || | || || ||||||| ||| || | | | |||| | | Sbjct 436 TCATGGTTATTTTAGTCGATTGATTTTTCAATATGGTAGTTTGGATATTTCTCGTTCTTT 495 Query 170454 TCACTTCTTC 170463 || |||||| Sbjct 496 ACATTTCTTC 505 >seq753951 Length=5828 Score = 100 bits (110), Expect = 3e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 170030 AGTGGGAACTATCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATATTCTGCTC 170089 |||||||||| || || ||| ||||||||||||||| ||| ||||||| ||| Sbjct 1779 AGTGGGAACTTAGATTTTGTCTAGATATGCGTCCTTGGATTGTTGTTACATATTCAACTC 1720 Query 170090 CAGTGTCAGCAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAG 170149 || || | | | ||| ||||| | | | ||||||| || || || Sbjct 1719 TTGTTGTAGTTACTATTGTTGTTTTCTTGATCAACCTAATCGGTCAATGAAACTTTTCTA 1660 Query 170150 ACGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGC 170209 | || ||| ||||||| | || ||||| || ||||||||| | |||||||| || ||| Sbjct 1659 ATGGTATGTCTCTAGGACTTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGT 1600 Query 170210 ACAACATTCTTATGCACCCATTCCA 170234 ||| ||||| ||||||||||||||| Sbjct 1599 ACATCATTCCTATGCACCCATTCCA 1575 >seq711014 Length=229 Score = 93.3 bits (102), Expect = 5e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 170160 TCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCT 170219 |||||| ||||| ||||| || |||||||| | |||||||| || ||||||||||| || Sbjct 145 TCTAGGAATCTCTGGTACCTTCAACTTCATTATTGTATTCCAGGCTGAGCACAACATCCT 204 Query 170220 TATGCACCCATTCCATATG 170238 ||||||||||||||| ||| Sbjct 205 TATGCACCCATTCCACATG 223 >seq161073 Length=246 Score = 93.3 bits (102), Expect = 5e-14 Identities = 165/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 169948 GATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTCCTTATCGGA 170007 ||||| ||||| || || ||||| |||||| | || || | | |||| | | | || Sbjct 6 GATGAATGGTTATACAATGGTGGCCCTTATGAGCTAATTGTTCTACACTACTTACTTGGT 65 Query 170008 ATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATGCGTCCTTGG 170067 | || ||||||||| | ||| |||||| | || | ||||||||| | |||| Sbjct 66 GTAGCTTTTTACATGGGTCGTGAGTAGGAACTTAGTTTCCATCTAGGTATGCACCATTGG 125 Query 170068 ATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTAGTGTATCCT 170127 || ||| ||||||| ||||| | |||| | ||||| ||||| | || || Sbjct 126 ATTGTTGTTGCATATTTAGCTCCTATTGCAGCTACTACTGCTGTTTTCTTGATCTACCCA 185 Query 170128 TTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTC 170187 | ||| | ||| || || || || ||||||||||| ||||| ||||| || |||||| Sbjct 186 ATTGGTTAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTC 245 Query 170188 A 170188 | Sbjct 246 A 246 >seq493281 Length=200 Score = 82.4 bits (90), Expect = 9e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 169834 GAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCA 169893 |||||||| | || || | | ||||| ||||| || ||||||||||| | |||| Sbjct 199 GAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATCTCTGGTGCCATCATTCCT 140 Query 169894 TCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTAGATGAG 169953 |||| || || ||| | ||||| || || || | ||||||| || | | ||||| Sbjct 139 ACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATAGGAAGCAACATCCGTTGATGAA 80 Query 169954 TGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||||| || || |||||||||||| | || || | | |||||| Sbjct 79 TGGTTATACAATGGTGGTCCTTATAAGCTAATTGTTCTACACTTC 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577339175700000