Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq109077 163 6e-35 seq736048 154 3e-32 seq689433 152 1e-31 seq313781 149 1e-30 seq750760 134 3e-26 seq662336 123 5e-23 seq113432 98.7 2e-15 seq256237 91.5 3e-13 seq183168 86.0 1e-11 >seq109077 Length=726 Score = 163 bits (180), Expect = 6e-35 Identities = 159/205 (78%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || |||||||| ||||| |||||||| || ||||||| || ||||| ||||| Sbjct 445 GTGAAGTGTTGACTCTTTCTGAATGTTGTAATCCGCGAGAGTTCGGCCGTCTTCCAGCTG 504 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| |||||||| || || | || ||||| || |||||||| || || || || || || Sbjct 505 CTTCCCTGCGAAAATCAGCCTCTGCTGGTCCGGTGGAATGCCCTCCTTATCCTGGATCTT 564 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || ||||| ||||||||||| || ||||| || || || |||| |||||||| || Sbjct 565 AGCTTTCACGTTGTCAATGGTGTCGGAGCTTTCGACCTCTAGAGTAATTGTCTTTCCGGT 624 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 || |||||| || || | |||||| Sbjct 625 CAGAGTTTTAACAAAAATCTGCATT 649 Score = 140 bits (154), Expect = 7e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 194949 CTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAA 195008 ||| || || || ||||| || || || || ||||||||||| |||||||| || ||||| Sbjct 1 CTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCATCTTCCAGCTGCTTCCCAGCGAA 60 Query 195009 GATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTT 195068 ||| | || || || || || || || ||||| ||||| ||||| ||| || || || Sbjct 61 GATCAATCTCTGCTGATCCGGTGGGATCCCTTCCTTGTCCTGAATCTTTGCTTTCACATT 120 Query 195069 CTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTAC 195128 ||||||||||| ||||| ||||| || || || | ||||| || |||| ||| || || Sbjct 121 ATCAATGGTGTCGGAACTCTCCACCTCCAGCGTGATGGTCTTCCCAGTCAGAGTCTTCAC 180 Query 195129 GAACACTTGCAT 195140 ||| | |||||| Sbjct 181 GAAGATTTGCAT 192 >seq736048 Length=1016 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| ||||||||||| || || || ||||| || | || | ||||| || Sbjct 654 AACCAAGTGAAGGGTGGACTCTTTCTGGATGTTATAATCAGCCAATGTCCGGCCATCCTC 713 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||||||| || || ||||| | || |||||||| ||||| || || ||||| || Sbjct 714 GAGCTGCTTACCAGCAAATATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTG 773 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 |||||| ||||| || ||||||||||| || || || ||||||||||| | || || Sbjct 774 GATTTTTGCTTTGACATTATCAATGGTGTCTGAGCTCTCAACTTCAAGGGTGATAGTTTT 833 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || | || || || || | |||||| Sbjct 834 TCCAGTGAGGGTCTTCACAAAAATTTGCAT 863 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||||||||| || || || || || |||||||| || || | ||||| |||||||| Sbjct 198 AACAAGGTGAAGGGTTGATTCCTTCTGTATATTGTAGTCAGCCAAAGTTCGACCATCTTC 257 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||||| || ||||| || | || ||||| || ||||| ||||| ||||| || Sbjct 258 TAGCTGCTTACCAGCAAAGATTAGCCTCTGCTGGTCGGGTGGAATACCTTCCTTGTCCTG 317 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 |||||| || || || || |||||||| ||||| || || |||||||| | || || Sbjct 318 GATTTTTGCTTTCACATTGTCGATGGTGTCTGAACTCTCAACCTCAAGGGTGATAGTTTT 377 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | |||||| Sbjct 378 ACCAGTAAGGGTCTTCACAAATATTTGCAT 407 Score = 127 bits (140), Expect = 4e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || || || || || || ||||| || || | || | |||||||| Sbjct 426 AACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCCGCCAATGTCCGACCATCTTC 485 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||| ||||| || || || || | || |||||||| ||||| || || ||||| || Sbjct 486 CAGCTGTTTACCAGCAAATATGAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTG 545 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||||| || || || || |||||||| ||||| || ||||||||||||| || || Sbjct 546 GATTTTAGCTTTCACATTATCGATGGTGTCTGAACTCTCAACTTCAAGGGTAATAGTTTT 605 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || | || || || || | |||||| Sbjct 606 TCCAGTGAGGGTCTTCACAAAAATTTGCAT 635 Score = 125 bits (138), Expect = 2e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 194962 TTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGT 195021 ||||| || || | ||| | ||||| || ||||| || || || ||||| || | ||| Sbjct 1 TTGTAGTCAGCCAAAGTGCGGCCATCCTCAAGCTGTTTTCCAGCAAAGATCAGCCTCTGT 60 Query 195022 TGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCC 195081 ||||| |||||||||||||| ||||| ||||||||| |||||| || ||||| ||||| Sbjct 61 TGGTCAGGAGGAATGCCTTCCTTGTCCTGAATTTTTGCCTTGACATTGTCAATTGTGTCT 120 Query 195082 GAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || |||||||| || | || || || || || || || || || | ||||| Sbjct 121 GAGCTCTCAACTTCAAGAGTGATTGTTTTACCAGTTAAGGTCTTCACAAAAATCTGCAT 179 Score = 100 bits (110), Expect = 6e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| |||||||| || || || || ||||| || | || | ||||| || Sbjct 882 AACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAATCAGCCAATGTCCGGCCATCCTC 941 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||||| || |||||||| | || |||||||||||||| || || ||||| || Sbjct 942 CAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGAGGAATACCCTCCTTGTCCTG 1001 Query 195051 AATTTTTTGCTTGAC 195065 || ||| ||| || Sbjct 1002 GATCTTTGCCTTCAC 1016 >seq689433 Length=414 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||||||||| || ||||| |||||||| ||||| || | ||||| || | ||| Sbjct 225 GTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGTGTCCGACCATCCTCCAACTG 166 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| ||||||||||| || | || || |||||||| || || || ||||| |||||||| Sbjct 165 CTTCCCTGCGAAGATCAGCCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCCTGAATTTT 106 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || || ||||| || || || ||||| || || || | ||||||||| || Sbjct 105 GGCCTTCACATTATCTATGGTATCTGAGCTCTCCACCTCTAGTGTGATCGTCTTTCCCGT 46 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || || || | ||||| Sbjct 45 CAGGGTCTTCACAAATATCTGCAT 22 >seq313781 Length=385 Score = 149 bits (164), Expect = 1e-30 Identities = 132/165 (80%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || ||||| |||||||| |||||||||| |||||| || ||||| Sbjct 169 GTGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTTCGCCCATCCTCAAGCTG 110 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||| || |||| || |||||||| ||||| ||||| ||||| ||||| || Sbjct 109 CTTGCCGGCGAAAATCAGTCTCTGCTGGTCTGGTGGAATCCCTTCCTTGTCCTGAATCTT 50 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 || ||||| ||||||||||| || ||||| || || ||||| Sbjct 49 CGCTTTCACGTTGTCAATGGTGTCGGAGCTTTCGACCTCCAGGGT 5 Score = 140 bits (154), Expect = 7e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 194949 CTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAA 195008 ||| || || || ||||| || || || || ||||||||||| |||||||| || ||||| Sbjct 385 CTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCATCTTCCAGCTGCTTCCCGGCGAA 326 Query 195009 GATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTT 195068 ||| || | || || || || || || || || ||||| ||||| ||| ||||| || Sbjct 325 GATCAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCCTGAATCTTTGCTTTGACATT 266 Query 195069 CTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTAC 195128 ||||||||||| ||||| ||||| || || || | |||||||| |||| || || || Sbjct 265 ATCAATGGTGTCGGAACTCTCCACCTCCAGCGTGATGGTCTTTCCAGTCAGTGTCTTCAC 206 Query 195129 GAACACTTGCAT 195140 ||| | |||||| Sbjct 205 GAAGATTTGCAT 194 >seq750760 Length=1299 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | || | ||| || || ||||| || || || ||||| || || || || Sbjct 356 TCTGAGGCGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCTAGGGT 297 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || || ||||||||||| || ||||| || || ||||| ||||| ||||||||||| Sbjct 296 CCGGCCGTCCTCGAGCTGCTTCCCGGCGAATATGAGGCGTTGCTGGTCCGGAGGAATGCC 237 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| || || || ||| || || || |||||||| || ||||| ||||| Sbjct 236 TTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCAGAGGACTCCACCTCAAG 177 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | ||||| || || | ||||| ||||| | ||||| Sbjct 176 GGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 135 >seq662336 Length=3756 Score = 123 bits (136), Expect = 5e-23 Identities = 107/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 || || ||||||||||||||||| |||||||||||||| || || ||||| |||||||| Sbjct 293 CTAAGCCTCAAAACAAGGTGAAGTGTGGACTCTTTTTGGATGTTATAATCTGCAAGAGTG 234 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| || || || || || || || | || || || || |||||||||||| Sbjct 233 CGACCATCTTCCAGTTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAGGAATGCCT 174 Query 195040 TCTTTGTCTTGAA 195052 || ||||| |||| Sbjct 173 TCCTTGTCCTGAA 161 >seq113432 Length=226 Score = 98.7 bits (108), Expect = 2e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || |||||||| || || || || | | ||| ||||| || || || ||||| Sbjct 225 CCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCAGGGGGGATTCCTTCC 166 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||| ||||| ||| || || |||| || || || || || ||||||||||| Sbjct 165 TTGTCTTGGATTTTCGCCTTTACATTGTCAACTGTATCTGAGCTCTCAACTTCAAGGGTG 106 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 | |||||||| || | || || || || | ||||||| Sbjct 105 ATGGTCTTTCCGGTGAGTGTCTTAACAAATATTTGCATT 67 >seq256237 Length=207 Score = 91.5 bits (100), Expect = 3e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 195019 TGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTG 195078 || |||||||||||||| || || ||||| || || ||| ||| || || ||||| || Sbjct 1 TGCTGGTCTGGAGGAATACCCTCCTTGTCCTGGATCTTTGCCTTCACATTGTCAATTGTA 60 Query 195079 TCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGC 195138 || ||||| || |||||||| || | |||||||| || | ||||| || || | |||| Sbjct 61 TCTGAACTCTCAACTTCAAGTGTGATGGTCTTTCCAGTTAGCGTTTTGACAAATATTTGC 120 Query 195139 ATT 195141 ||| Sbjct 121 ATT 123 >seq183168 Length=420 Score = 86.0 bits (94), Expect = 1e-11 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||| || ||||||||||| |||||||| | ||||| || |||||||| || || |||| Sbjct 335 CTTTCTGGATATTGTAATCAGCAAGAGTGCGACCATCCTCAAGCTGCTTTCCAGCAAAGA 394 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAAT 195035 | ||||| || ||||| |||||||| Sbjct 395 TCAGTCGCTGCTGGTCCGGAGGAAT 419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1098733106947875