Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq516297 233 6e-57 seq551508 203 9e-48 seq545415 178 4e-40 seq717558 114 4e-21 seq161073 89.7 1e-13 >seq516297 Length=515 Score = 233 bits (258), Expect = 6e-57 Identities = 361/513 (70%), Gaps = 2/513 (0%) Strand=Plus/Minus Query 26260 TGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGA 26319 |||||| |||||||| || |||||||||||||| ||||| ||| | |||||| | || || Sbjct 513 TGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCTAGGCTGA 454 Query 26320 ACATAATATACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGC 26379 || || || || |||||| ||||||| ||| ||| | | ||| || || ||||| | Sbjct 453 GCACAACATCCTTATGCACTCATTCCACATGT-TGGCATAGTTGGTGTATTTGGTGGTTC 395 Query 26380 TCTTTTCGCTGCTATGCACGGAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGA 26439 || ||| || |||||| || ||||| || || | ||| ||||| | ||| Sbjct 394 CCTATTCAGTGTTATGCATGGTTCATTGGTAACCTCTAGTTTGATTAGGGAAACCATAGA 335 Query 26440 GGAAGTCTCACAGAATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGT 26499 | | || |||| || || | || | ||||||||||| || ||||||||| Sbjct 334 AAATGAATCTGCGAATGTAGGTTACACATTCGATCAAGATGAAGAAACTTATAATATTAC 275 Query 26500 CGCTGCACACGGGTACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCG 26559 ||||| || || || | ||| |||| ||||| || ||||| | || ||||| || Sbjct 274 GGCTGCTCATGGTTATTCTGGTCGATTGATTTTCCAATATGCTATATTCAATAATTCTCG 215 Query 26560 TTCTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGG 26619 |||| | |||||||| || | | ||||||| | || || || ||| | | || | || Sbjct 214 TTCTTTACATTTCTTCCTAGTTGCTTGGCCTATAGTAGGTATCTGGTTCATTGCTTTAGG 155 Query 26620 TATCTGCACAATGGCATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGT 26679 |||| ||| || | || ||||||||||||| || || ||||| || |||| ||| Sbjct 154 TATCAACACTCTGACTTTCTACCTAAATGGTTTCAATTTCAACCAATCTATAGTTGATAG 95 Query 26680 TAATGGAAAGATAATACCTACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGA 26739 | | || |||| ||| | ||||||| | |||| || |||||||| || | || Sbjct 94 TCAAGGTTGTGTAATTAATACTTAGGCTGATATTATAAATCGTGCTAACCTTGGTATGGA 35 Query 26740 AGTTATGCACGAGCGTAATGCTCATAACTTTCC 26772 ||||||||| || |||||||||||||| ||||| Sbjct 34 AGTTATGCATGAACGTAATGCTCATAA-TTTCC 3 >seq551508 Length=510 Score = 203 bits (224), Expect = 9e-48 Identities = 333/480 (69%), Gaps = 0/480 (0%) Strand=Plus/Plus Query 26142 AGTGGGAACTATCTTACAGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCAC 26201 |||||||||| || | | || | ||| | || ||||| ||||||||||| |||| | Sbjct 31 AGTGGGAACTTAGTTTCCGTCTGGCTATGCGCCCTTGGATTGTTGTTGCATATTCAGCTC 90 Query 26202 CACTATCCGCAGCTCTCGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTG 26261 | | | || ||| || | ||||| | || || | || ||||| || ||| || Sbjct 91 CTGTTGCAGCTGCTACTGCTATTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTATG 150 Query 26262 ATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAAC 26321 |||| |||||||| | |||||||||||||| ||||| ||| | |||||||| | || | Sbjct 151 ATGGTATGCCTCTAGAAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGTTGAGC 210 Query 26322 ATAATATACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTC 26381 | || || || |||||||||||||| ||| | ||| ||||| || ||||| || | | Sbjct 211 ACAACATCCTTATGCACCCATTCCACATGTTAGATGTAGCTGGTGTATTCGGCGGTTCCC 270 Query 26382 TTTTCGCTGCTATGCACGGAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGG 26441 | ||| |||||||| || ||||| || || | || ||||| ||| | Sbjct 271 TATTCAGAGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATAAGGGAAACCACAAAAA 330 Query 26442 AAGTCTCACAGAATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCG 26501 | | || ||| || || || || || ||||| ||||| || ||||||||||| | Sbjct 331 ATGAATCTGCTAATGCAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTGG 390 Query 26502 CTGCACACGGGTACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTT 26561 |||| | || || ||||| |||| || || || ||||| ||||| ||||| ||| Sbjct 391 CTGCTCCAGGTTATTTTGGCCGATTGATATTCCAATATGCTAGTTTCAATAATTCATGTT 450 Query 26562 CTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTA 26621 || | ||||||| || ||| ||||||| || || || || ||| | || || | |||| Sbjct 451 CTTTAAATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTA 510 >seq545415 Length=298 Score = 178 bits (196), Expect = 4e-40 Identities = 218/298 (73%), Gaps = 0/298 (0%) Strand=Plus/Plus Query 26468 TTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTA 26527 || || ||||| ||||| || ||||||||||| ||||| || || || ||||| |||| Sbjct 1 TTCGGTCAAGAGGAAGAAACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCTGATTG 60 Query 26528 ATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGG 26587 || || | ||||| ||||| |||| |||||| | |||||||| | ||| ||||| Sbjct 61 ATCTTCTAATATGCTAGTTTCTATAATTCTCGTTCTTTACATTTCTTCATAGCTGCTTGG 120 Query 26588 CCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAAT 26647 | || || || || ||| | | || | |||||| |||| ||| | || ||||||||| Sbjct 121 CTTGTAGTAGGTATCTGGTTCATTGCTTTAGGTATCGGCACTATGACTTTCAACCTAAAT 180 Query 26648 GGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTACATGGGCT 26707 ||||| || |||||||| || |||| ||| | || |||| ||| |||||| Sbjct 181 GGTTTCAATTTTAACCAATCTATAGTTGATAGCCAAGGTCGTGTAATTAATACTTGGGCT 240 Query 26708 GATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATA 26765 ||| | | ||||| |||||||| || | ||||||||||| || |||||||||||| Sbjct 241 GATTTTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAATGTAATGCTCATA 298 >seq717558 Length=1667 Score = 114 bits (126), Expect = 4e-21 Identities = 273/408 (67%), Gaps = 10/408 (2%) Strand=Plus/Plus Query 26254 TTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCA 26313 |||| | |||| ||||||| | || || ||||||||||| ||| | |||||| | Sbjct 1026 TTTTTTTAATGGTTTGCCTCTAGTAATTAGTGCCACTTTTAACTTCATGATTGTATTCTA 1085 Query 26314 AGCAGAACATAATATACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGG 26373 |||| || || || || |||||| ||||||| ||| | ||| ||| | ||||| Sbjct 1086 AGCAAAATGCAACATCCTTATGCACTCATTCCACATGTTCGTTGTACTTGGTATATTCGG 1145 Query 26374 TGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGTTACTTCCTCACTT--ATTGCAGAA 26431 || | | || || |||||| || |||||| || | | | || || | | | Sbjct 1146 AGGTTCCCCATTTAATGTTATGCATGGTTCTTTGGTAACCT--TTAGTTTGATAGG-GTA 1202 Query 26432 ACGACAGAGGAAGTCTCACAGAATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATAT 26491 || ||| | | | | | ||| | || || | ||||| ||||| ||||| || ||| Sbjct 1203 ACCACAAAAAATGAATATCCTAATGAAGGTTAAATATTTGGTCAAGAGGAAGAAACTTAT 1262 Query 26492 AATATTGTCGCTGCACACGGGTACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAAT 26551 | |||||| | || | || || ||||| |||| || || ||||| ||||| ||| Sbjct 1263 ACTATTGTGGTTGATTATGGTTATTTTGGCCGATTGGTTAC-CAATATGCTAGTTTCAAT 1321 Query 26552 AACAGCCGTTCTCTTCATTTCTTTC----TTGCTACTTGGCCGGTTGTTGGCATATGGCT 26607 || | || | | |||||||| | | ||||||||| | || || || || | | | Sbjct 1322 AATTCACATTTTTTACATTTCTTCCCAGCTAGCTACTTGGACTGTAGTAGGTATCTAGTT 1381 Query 26608 GACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGGTTTTAA 26655 || || | || ||| |||| ||||| || |||||||||||||| || Sbjct 1382 CACTACTTTAGGCATCAGCACTATGGCTTTCAACCTAAATGGTTTCAA 1429 >seq161073 Length=246 Score = 89.7 bits (98), Expect = 1e-13 Identities = 170/243 (70%), Gaps = 8/243 (3%) Strand=Plus/Plus Query 26060 GACGAGTGGCTATACAATGGCGGACCATATCAACTCATTATCTTCCACTTCTTAATAGGA 26119 || || ||| |||||||||| || || ||| | || ||| | | |||| |||| | || Sbjct 6 GATGAATGGTTATACAATGGTGGCCCTTATGAGCTAATTGTTCTACACTACTTACTTGGT 65 Query 26120 GTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAGACTAGGAATGAGACCAT-G 26178 ||||| || || | ||| |||||| || | ||||| ||| ||||| | Sbjct 66 GTAGCTTTTTACATGGGTCGTGAGTAGGAACTTAGTTTCCATCTAGGTATGC-ACCATTG 124 Query 26179 GATATTTGTTGCATATACAGCACCACTATCCGCAGCT-CT--CGCAGTGTTCTTAGTTTA 26235 ||| ||||||||||| ||| | |||| |||||| || || || ||||| | || Sbjct 125 GATTGTTGTTGCATATTTAGCTC--CTAT-TGCAGCTACTACTGCTGTTTTCTTGATCTA 181 Query 26236 TCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAA 26295 || | || |||| || ||| |||||| |||||||| || |||||||||||||| || Sbjct 182 CCCAATTGGTTAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAA 241 Query 26296 CTT 26298 ||| Sbjct 242 CTT 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145408945947000