Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq736048 132 4e-26 seq702768 123 2e-23 seq689433 107 2e-18 seq750760 95.1 9e-15 seq611781 95.1 9e-15 seq662336 93.3 3e-14 >seq736048 Length=1016 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||||||||| | ||| || |||||||| || ||||| || || || ||||| || Sbjct 637 CCGCCTCTTAAACGGAGAACCAAGTGAAGGGTGGACTCTTTCTGGATGTTATAATCAGCC 696 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| || | |||||||| |||||||| | | ||| || || || ||| Sbjct 697 AATGTCCGGCCATCCTCGAGCTGCTTACCAGCAAATATAAGCCTCTGCTGGTCTGGGGGA 756 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || || || || |||||| ||| ||| | || | ||||| || | || ||| Sbjct 757 ATACCCTCCTTGTCCTGGATTTTTGCTTTGACATTATCAATGGTGTCTGAGCTCTCAACT 816 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| |||| ||||| || || | || || ||||| || |||||| Sbjct 817 TCAAGGGTGATAGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCATG 864 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| ||||| || ||||||||||| || || | ||||| |||| || | ||| Sbjct 205 TGAAGGGTTGATTCCTTCTGTATATTGTAGTCAGCCAAAGTTCGACCATCTTCTAGCTGC 264 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| || | | ||| || ||||| ||||| ||||| || || || |||||| Sbjct 265 TTACCAGCAAAGATTAGCCTCTGCTGGTCGGGTGGAATACCTTCCTTGTCCTGGATTTTT 324 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || | ||||| || | || || ||||| |||| ||||| || || Sbjct 325 GCTTTCACATTGTCGATGGTGTCTGAACTCTCAACCTCAAGGGTGATAGTTTTACCAGTA 384 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | || || |||||||| |||||| Sbjct 385 AGGGTCTTCACAAATATTTGCATG 408 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| ||||| | ||| || |||||||||||||| || || || ||||| || || Sbjct 409 CCACCTCTCAAACGGAGAACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCCGCC 468 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| || ||||| |||||||| | | ||| || || || ||| Sbjct 469 AATGTCCGACCATCTTCCAGCTGTTTACCAGCAAATATGAGCCTCTGCTGGTCTGGGGGA 528 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || || || || ||||| ||| ||| | || | ||||| || | || ||| Sbjct 529 ATACCCTCCTTGTCCTGGATTTTAGCTTTCACATTATCGATGGTGTCTGAACTCTCAACT 588 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| || | ||||| || || | || || ||||| || |||||| Sbjct 589 TCAAGGGTAATAGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCATG 636 Score = 116 bits (128), Expect = 3e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 101291 TTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGT 101350 ||||| || || | ||| | | |||| || | || || || ||||| |||| | |||| Sbjct 1 TTGTAGTCAGCCAAAGTGCGGCCATCCTCAAGCTGTTTTCCAGCAAAGATCAGCCTCTGT 60 Query 101351 TGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCA 101410 || || || ||||||||||| || || ||||||||| || ||| | || | ||||| Sbjct 61 TGGTCAGGAGGAATGCCTTCCTTGTCCTGAATTTTTGCCTTGACATTGTCAATTGTGTCT 120 Query 101411 GACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || ||||||||||||| ||||| || ||||| || || ||||| |||||||| Sbjct 121 GAGCTCTCAACTTCAAGAGTGATTGTTTTACCAGTTAAGGTCTTCACAAAAATCTGCAT 179 >seq702768 Length=508 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| || ||||| ||||| || || || || |||||||| || | ||| | | Sbjct 316 ACGAAGAACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTCCGACC 257 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| ||||| ||||| |||||||| || | | ||| ||||| || || || ||||| || Sbjct 256 ATCCTCCAACTGCTTCCCTGCAAAGATGAGCCTCTGCTGATCTGGAGGGATCCCTTCCTT 197 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || ||||||||| || ||| | |||| |||||| || | || || || || || | Sbjct 196 GTCCTGAATTTTTGCCTTCACATTATCTATAGTGTCTGAGCTCTCAACCTCTAGTGTAAT 137 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || | || || |||||||||||||| Sbjct 136 TGTCTTTCCCGTCAGGGTCTTCACAAATATCTGCAT 101 >seq689433 Length=414 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| || || || || || || |||||||| || | || | |||| ||| Sbjct 230 ACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGTGTCCGACCATCCTCC 171 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 || ||||| ||||| || |||| | ||| ||||| || || || || || || || ||| Sbjct 170 AACTGCTTCCCTGCGAAGATCAGCCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCCTGA 111 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| || ||| | |||| || || || | ||||| || || |||| ||| || Sbjct 110 ATTTTGGCCTTCACATTATCTATGGTATCTGAGCTCTCCACCTCTAGTGTGATCGTCTTT 51 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || |||||||||||||| Sbjct 50 CCCGTCAGGGTCTTCACAAATATCTGCAT 22 >seq750760 Length=1299 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | || | || || || |||||||| || || || || ||||| || || Sbjct 361 CCACCTCTGAGGCGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCT 302 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | | || || | ||||| || || ||||| | || || || || || ||| Sbjct 301 AGGGTCCGGCCGTCCTCGAGCTGCTTCCCGGCGAATATGAGGCGTTGCTGGTCCGGAGGA 242 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || || ||| | || | |||||||| | ||||| Sbjct 241 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCAGAGGACTCCACC 182 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || | || || || |||| ||||| || || |||||||| Sbjct 181 TCAAGGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 135 >seq611781 Length=262 Score = 95.1 bits (104), Expect = 9e-15 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 101305 AGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAAT 101364 ||| ||| |||| || | ||||| || ||||| ||||| | || || || || || || Sbjct 259 AGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGGGAT 200 Query 101365 GCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTC 101424 ||||| || ||||| ||||| |||||| | || | || ||||| ||||||| || Sbjct 199 TCCTTCCTTGTCTTGGATTTTCGCCTTTACATTGTCGATTGTATCAGAGCTTTCCACCTC 140 Query 101425 AAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| |||| || || || || | || ||||||||||| ||||| Sbjct 139 AAGCGTGATGGTCTTTCCAGTCAGTGTCTTTACAAATATTTGCAT 95 >seq662336 Length=3756 Score = 93.3 bits (102), Expect = 3e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||| || | | ||||| | ||||| || || |||||||| || || ||||| | Sbjct 301 TTCCTCCCCTAAGCCTCAAAACAAGGTGAAGTGTGGACTCTTTTTGGATGTTATAATCTG 242 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | ||| | |||| |||| ||| || || ||||| ||||| | ||| ||||| || | Sbjct 241 CAAGAGTGCGACCATCTTCCAGTTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAG 182 Query 101361 GAATGCCTTCTTTATCTTGAA 101381 |||||||||| || || |||| Sbjct 181 GAATGCCTTCCTTGTCCTGAA 161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 392626586186625