Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq516297 271 9e-68 seq551508 268 1e-66 seq616439 147 3e-30 seq545415 145 9e-30 seq717558 109 6e-19 seq493281 100 3e-16 seq455454 89.7 6e-13 seq753951 82.4 9e-11 >seq516297 Length=515 Score = 271 bits (300), Expect = 9e-68 Identities = 373/519 (72%), Gaps = 7/519 (1%) Strand=Plus/Minus Query 155425 TCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCA 155484 ||||||| |||||||| || |||||||||||||| |||| ||| | || ||| | || Sbjct 515 TCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCTAGGCT 456 Query 155485 GAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGA 155544 || ||||| |||||||||||| | ||||||||| |||| ||| ||||| || ||||| Sbjct 455 GAGCACAACATCCTTATGCACTCATTCCACATG-TTGGCATAGTTGGTGTATTTGGTGGT 397 Query 155545 TCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACT 155604 || || ||| || |||||| ||||||||||| || ||| | || | ||||| | Sbjct 396 TCCCTATTCAGTGTTATGCATGGTTCATTGGTAACCTCTAGTTTGATTAGGGAAACCATA 337 Query 155605 GAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATT 155664 || | || ||| ||| ||||||| |||| ||||| |||||||||||||| ||| Sbjct 336 GAAAATGAATCTGCGAATGTAGGTTACACATTCGATCAAGATGAAGAAACTTATAATATT 277 Query 155665 GTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCA 155724 ||||||||||| || | ||||| | || ||||| ||||| ||||| || || Sbjct 276 ACGGCTGCTCATGGTTATTCTGGTCGATTGATTTTCCAATATGCTATATTCAATAATTCT 217 Query 155725 AGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATG 155784 | | | || |||||||| | ||| |||||| | || | |||||| | |||| | Sbjct 216 CGTTCTTTACATTTCTTCCTAGTTGCTTGGCCTATAGTAGGTATCTGGTTCATTGCTTTA 157 Query 155785 GGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGAC 155844 ||| | || || | ||| |||| || |||||||| |||||||| ||| |||| || Sbjct 156 GGTATCAACACTCTGACTTTCTACCTAAATGGTTTCAATTTCAACCAATCTATAGTTGA- 98 Query 155845 GCTAGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGT 155901 |||| ||| || || ||| | ||| || ||| | || || ||| |||||| Sbjct 97 --TAGTCAAGGTTGTGTAATTAATACTTAGGCTGATATTATAAATCGTGCTAACCTTGGT 40 Query 155902 ATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCT 155940 |||||||| ||||| || ||||| ||||| || |||||| Sbjct 39 ATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCT 1 >seq551508 Length=510 Score = 268 bits (296), Expect = 1e-66 Identities = 351/486 (72%), Gaps = 0/486 (0%) Strand=Plus/Plus Query 155302 GGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATAC 155361 |||||| ||||||||||| || |||||| | ||||| |||||||| ||||||||| Sbjct 24 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGCTATGCGCCCTTGGATTGTTGTTGCATAT 83 Query 155362 TCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCT 155421 || || || || | ||||| ||| | ||| | | || || | |||||||| Sbjct 84 TCAGCTCCTGTTGCAGCTGCTACTGCTATTTTCTTGATCTACCCAATTGGTCAAGGAAGC 143 Query 155422 TTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAA 155481 || | ||||| |||||||| | |||||||||||||| |||| ||| | || ||||| Sbjct 144 TTTTATGATGGTATGCCTCTAGAAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAG 203 Query 155482 GCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGT 155541 | || ||||| |||||||||||||| ||||||||| | | ||||| ||||| ||||| Sbjct 204 GTTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGATGTAGCTGGTGTATTCGGC 263 Query 155542 GGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACT 155601 || || || ||| |||||||| ||||| ||||| || ||| | || | ||||| Sbjct 264 GGTTCCCTATTCAGAGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATAAGGGAAACC 323 Query 155602 ACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAAC 155661 || | | || ||| || |||||||| ||||| ||||| |||||||||||||| Sbjct 324 ACAAAAAATGAATCTGCTAATGCAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAAT 383 Query 155662 ATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAAC 155721 ||||| ||||||| || || || || || | || ||||| ||||| ||||| || Sbjct 384 ATTGTGGCTGCTCCAGGTTATTTTGGCCGATTGATATTCCAATATGCTAGTTTCAATAAT 443 Query 155722 TCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCT 155781 ||| | | | | |||||||| ||||| |||||||| || | |||||| |||||| Sbjct 444 TCATGTTCTTTAAATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCT 503 Query 155782 ATGGGT 155787 | ||| Sbjct 504 TTAGGT 509 >seq616439 Length=1776 Score = 147 bits (162), Expect = 3e-30 Identities = 204/286 (71%), Gaps = 0/286 (0%) Strand=Plus/Plus Query 155422 TTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAA 155481 |||| ||||| |||||| | || |||||| ||||||| |||| ||| | || ||| | Sbjct 185 TTCTATGATGATATGCCTTTAGGAATCTCTAGTACTTTCAACTTCATGATTGTATTCTAG 244 Query 155482 GCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGT 155541 | || ||||| ||||||||||||| |||||| || | || |||| ||||| || | | Sbjct 245 GTTGAGCACAACATCCTTATGCACCTATTCCACTTGTTAGGTGTAGTTGGTGTATTTGAT 304 Query 155542 GGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACT 155601 | ||| | ||| || |||||| |||| ||||| || | | | ||| ||||| Sbjct 305 GAGTCTTTATTCAATGTTATGCATGGTTTCTTGGTAACCTTTAGTTTGATCAAGGAAACC 364 Query 155602 ACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAAC 155661 || | | || | | || || |||||||| |||| ||||| |||||||||||||| Sbjct 365 ACAAAAAATGAATTTGTTAATTAAGGTTACAAATTCGATCAAGATGAAGAAACTTATAAT 424 Query 155662 ATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATG 155707 || || | ||||||||| || || |||| | || || || |||| Sbjct 425 ATCGTAGTTGCTCATGGTTATTTTAGTCGATTGATTTTTCAATATG 470 >seq545415 Length=298 Score = 145 bits (160), Expect = 9e-30 Identities = 212/297 (71%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 155635 TTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTT 155694 ||||| ||||| |||||||||||||| ||||| ||||||||||| || || || | | Sbjct 1 TTCGGTCAAGAGGAAGAAACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCTGATTG 60 Query 155695 ATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGG 155754 |||||| | ||||| ||| | || || | | | || |||||| | ||||| ||| Sbjct 61 ATCTTCTAATATGCTAGTTTCTATAATTCTCGTTCTTTACATTTCTTCATAGCTGCTTGG 120 Query 155755 CCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAAC 155814 | ||| || | |||||| | |||| | ||| | || ||| | |||||||| || Sbjct 121 CTTGTAGTAGGTATCTGGTTCATTGCTTTAGGTATCGGCACTATGACTTTCAACCTAAAT 180 Query 155815 GGTTTCAACTTCAACCAGTCTGTAGTAGA-CGCTAGTGGTAAAGTCATCCCTACATGGGC 155873 |||||||| || ||||| ||| |||| || || | ||| || || ||| ||||| Sbjct 181 GGTTTCAATTTTAACCAATCTATAGTTGATAGCCA-AGGTCGTGTAATTAATACTTGGGC 239 Query 155874 AGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCA 155930 || || | ||||| ||| |||||||||||||| ||||| || |||| ||||| Sbjct 240 TGATTTTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAATGTAATGCTCA 296 >seq717558 Length=1667 Score = 109 bits (120), Expect = 6e-19 Identities = 249/372 (67%), Gaps = 6/372 (2%) Strand=Plus/Plus Query 155455 ACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCAC 155514 |||||||||| ||| | || ||| ||||| || ||| |||||||||||| | |||||| Sbjct 1060 ACTTTTAACTTCATGATTGTATTCTAAGCAAAATGCAACATCCTTATGCACTCATTCCAC 1119 Query 155515 ATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTG 155574 ||| | | ||| ||| | ||||| || || | || || |||||| ||||| ||| Sbjct 1120 ATGTTCGTTGTACTTGGTATATTCGGAGGTTCCCCATTTAATGTTATGCATGGTTCTTTG 1179 Query 155575 GTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAG 155634 || || | | | || | | ||| || | | || | || || | ||||| | Sbjct 1180 GTAACCTTTAGTTTGAT-AGGGTAACCACAAAAAATGAATATCCTAATGAAGGTTAAATA 1238 Query 155635 TTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTT 155694 || || ||||| ||||||||||||| ||||| | || | |||| || || || || || Sbjct 1239 TTTGGTCAAGAGGAAGAAACTTATACTATTGTGGTTGATTATGGTTATTTTGGCCG-ATT 1297 Query 155695 ATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTC----CTTGCTGC 155750 | ||| ||||| ||||| || ||| | | || |||||| || ||| | Sbjct 1298 GGTTACCAATATGCTAGTTTCAATAATTCACATTTTTTACATTTCTTCCCAGCTAGCTAC 1357 Query 155751 ATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCT 155810 ||| |||| || | |||| | ||| || | || | || ||||| |||||||| Sbjct 1358 TTGGACTGTAGTAGGTATCTAGTTCACTACTTTAGGCATCAGCACTATGGCTTTCAACCT 1417 Query 155811 TAACGGTTTCAA 155822 || |||||||| Sbjct 1418 AAATGGTTTCAA 1429 >seq493281 Length=200 Score = 100 bits (110), Expect = 3e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 155112 TGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCC 155171 |||||| || |||| ||| || | ||||| ||||| || ||||||||||| | | || Sbjct 200 TGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATCTCTGGTGCCATCATTCC 141 Query 155172 TAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGA 155231 || ||| || || ||| | ||||| || || || | ||||||| || | ||||||| Sbjct 140 TACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATAGGAAGCAACATCCGTTGATGA 81 Query 155232 GTGGTTGTACAATGGTGGTCCTT 155254 ||||| |||||||||||||||| Sbjct 80 ATGGTTATACAATGGTGGTCCTT 58 >seq455454 Length=251 Score = 89.7 bits (98), Expect = 6e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 155473 GTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGT 155532 || ||||| || || ||||| |||||||||||||| ||||||||| | || ||| ||| Sbjct 4 GTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCTTAGTTGGT 63 Query 155533 GTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGAC 155579 || |||| || || || ||| || |||||||||||| ||||| || Sbjct 64 GTATTCGACGGTTCCCTATTCAGTGTTATGCACGGTTCCTTGGTAAC 110 >seq753951 Length=5828 Score = 82.4 bits (90), Expect = 9e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 155300 GTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCAT 155359 |||||| | ||||||||||| | |||| | |||||||||||||| |||| ||| Sbjct 1788 GTGGTCATAAGTGGGAACTTAGATTTTGTCTAGATATGCGTCCTTGGATTGTTGTTACAT 1729 Query 155360 ACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTT-TCGGTCAAGGT 155418 | || | | || | | | | | ||| ||| ||| | | ||| |||||||| | Sbjct 1728 ATTCAACTCTTGTTGTAGTTACTATTGTTGTTTTC-TTGATCAACCTAATCGGTCAATGA 1670 Query 155419 TCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTC 155478 || ||| ||| ||| |||| || | ||||||||||| |||| ||| | || ||| Sbjct 1669 AACTTTTCTAATGGTATGTCTCTAGGACTTTCTGGTACTTTCAACTTCATGATTGTATTC 1610 Query 155479 CAAGCAGAACACAATATCCTTATGCACCCCTTCCACA 155515 || || || ||| || | ||||||||| ||||||| Sbjct 1609 CAGGCTGAGTACATCATTCCTATGCACCCATTCCACA 1573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579307593555000