Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq726932 113 4e-20 seq750760 111 1e-19 seq113432 96.9 3e-15 seq736048 95.1 1e-14 seq620935 95.1 1e-14 seq611781 87.8 2e-12 seq109077 86.0 6e-12 >seq726932 Length=530 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| ||||| || || || || || || || || ||| | | Sbjct 250 GATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTTGAATCGTC 191 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||| ||||| || || || || || Sbjct 190 TGACACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCACCGGACCA 131 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| || || |||||||||||||| ||| | | | || || || Sbjct 130 GCAGCGTCTCATCTTCGCTGGAAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTACAA 71 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 ||| || ||||| ||||| || ||| ||||| | || | || || |||| Sbjct 70 CATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCGCCTCCGTGGTGGCG 21 >seq750760 Length=1299 Score = 111 bits (122), Expect = 1e-19 Identities = 151/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| ||||| ||||| || || || || || || || || | Sbjct 134 GATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATAACCCTTGAGGTGGAGTCCTC 193 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||| ||||| || ||||| || || Sbjct 194 TGACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCA 253 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||| | || || |||||||| ||||| ||||| | | | | | || || || Sbjct 254 GCAACGCCTCATATTCGCCGGGAAGCAGCTCGAGGACGGCCGGACCCTAGCTGACTACAA 313 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||| || ||||| || || || ||||||||| Sbjct 314 CATCCAGAAGGAGTCTACCCTCCACTTGGTG 344 >seq113432 Length=226 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| || || ||||| || || || || || ||||| || | | Sbjct 68 ATGCAAATATTTGTTAAGACACTCACCGGAAAGACCATCACCCTTGAAGTTGAGAGCTCA 127 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||||| || | ||||| || ||||||||||| |||||||| || || || || Sbjct 128 GATACAGTTGACAATGTAAAGGCGAAAATCCAAGACAAGGAAGGAATCCCCCCTGACCAG 187 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 ||| | ||||| ||||| || || ||||| |||||| Sbjct 188 CAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGAT 223 >seq736048 Length=1016 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || || || || ||||||||||| || ||||| || | Sbjct 635 ATGCAAATTTTTGTGAAGACCCTCACTGGAAAAACTATTACCCTTGAAGTTGAGAGTTCA 576 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| || ||||| ||||| || || || || || || || Sbjct 575 GACACCATCGATAATGTGAAAGCTAAAATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 516 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || | | || ||||| || ||||||||||| ||| ||| || | || | || || | Sbjct 515 CAGAGGCTCATATTTGCTGGTAAACAGCTGGAAGATGGTCG-GACA-TTGGCGGACTACA 458 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 |||| || |||||||| || || |||||||| | || ||| | || ||| Sbjct 457 ACATCCAGAAGGAATCTACCCTTCACTTGGTTCTCCGTTTGAGAGGTGGC 408 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || || || || |||||||| || || ||||| || | | Sbjct 863 ATGCAAATTTTTGTGAAGACCCTCACTGGAAAAACTATCACCCTTGAAGTTGAGAGCTCA 804 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||| ||||| ||||| || || || || || || || Sbjct 803 GACACCATTGATAATGTCAAAGCAAAAATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 744 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || ||||| || || ||||| |||||| | | || | ||||||||| Sbjct 743 CAGAGGCTTATATTTGCTGGTAAGCAGCTCGAGGATGGCCGGACATTGGCTGATTATAAC 684 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || || || || || || |||||||| Sbjct 683 ATCCAGAAAGAGTCCACCCTTCACTTGGT 655 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || || || ||||||||||| || || || || || | Sbjct 407 ATGCAAATATTTGTGAAGACCCTTACTGGTAAAACTATCACCCTTGAGGTTGAGAGTTCA 348 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||| ||||| ||||| ||||| || || ||||| || Sbjct 347 GACACCATCGACAATGTGAAAGCAAAAATCCAGGACAAGGAAGGTATTCCACCCGACCAG 288 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||||| || || ||||| || ||| ||| || | || || || Sbjct 287 CAGAGGCTAATCTTTGCTGGTAAGCAGCTAGAAGATGGTCGAACTTTGGCTGACTACAAT 228 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || |||||||| || || ||| Sbjct 227 ATACAGAAGGAATCAACCCTTCAC 204 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846 ||||||||| ||||| || || || ||||| || || || | | |||||||| || || Sbjct 1008 AAAGATCCAGGACAAGGAGGGTATTCCTCCAGACCAGCAGAGGCTTATCTTTGCTGGTAA 949 Query 24847 ACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906 |||||||||||| | | || | ||||||||||| || ||||| || || || || Sbjct 948 GCAGCTGGAGGATGGCCGGACATTGGCTGATTATAACATCCAGAAGGAGTCCACCCTTCA 889 Query 24907 CTTGGT 24912 |||||| Sbjct 888 CTTGGT 883 >seq620935 Length=1758 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | || || ||||| || || || || || || || || ||| | | Sbjct 250 GATGCAGATTTTCGTGAAGACCCTAACGGGGAAGACCATAACCCTAGAGGTTGAATCATC 191 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| ||||| || || || || || Sbjct 190 TGACACGATCGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCGGACCA 131 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || | ||||| || || |||||||||||||| ||| | | | || || || Sbjct 130 GCAGCGCCTCATCTTCGCTGGCAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTACAA 71 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 || || ||||| || || || ||| ||||| | || | || || |||| Sbjct 70 TATCCAGAAGGAGTCAACCCTCCACCTGGTGCTCCGCCTCCGTGGTGGCG 21 >seq611781 Length=262 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || || || || || || || ||||| || || ||| | | Sbjct 95 ATGCAAATATTTGTAAAGACACTGACTGGAAAGACCATCACGCTTGAGGTGGAAAGCTCT 154 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | || | ||||| || ||||||||||| |||||||| || || || || Sbjct 155 GATACAATCGACAATGTAAAGGCGAAAATCCAAGACAAGGAAGGAATCCCCCCAGACCAG 214 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 ||| | ||||| ||||| || || ||||| |||||| Sbjct 215 CAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGAT 250 >seq109077 Length=726 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || |||| || || || ||||| | || || || | | Sbjct 420 ATGCAGATCTTCGTGAAGACTTTAACTGGCAAGACAATTACCTTAGAGGTTGAGAGCTCG 361 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| ||||| || ||||| || || || || || || || Sbjct 360 GATACCATCGACAATGTGAAAGCGAAGATTCAGGACAAGGAGGGGATTCCACCGGACCAG 301 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||| || || || || ||||| |||||| | ||| | | ||||| ||| Sbjct 300 CAGAGGTTGATTTTCGCGGGCAAGCAGCTTGAGGATGGGCGAACTCTTGCTGATTACAAC 241 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || || || || || ||||||||| | || |||| || || Sbjct 240 ATTCAGAAAGAGTCTACCCTCCACTTGGTGCTTCGTCTGCGTGGTGG 194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445645364715000