Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17]
756,125 sequences; 432,755,284 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq109077 98.7 8e-16
seq736048 84.2 2e-11
>seq109077
Length=726
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || || || |||||||| ||||| || |||||| | || |||
Sbjct 420 ATGCAGATCTTCGTGAAGACTTTAACTGGCAAGACAATTACCTTAGAGGTTGAGAGCTCG 361
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| ||| | | || ||| ||||||| ||||| || || | || ||| ||
Sbjct 360 GATACCATCGACAATGTGAAAGCGAAGATTCAGGACAAGGAGGGGATTCCACCGGACCAG 301
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || | |||| ||||| || ||||| ||||||| |||| | || |||||||||
Sbjct 300 CAGAGGTTGATTTTCGCGGGCAAGCAGCTTGAGGATGGGCGAACTCTTGCTGATTACAAC 241
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| ||||| ||||| | ||| ||||| | | ||||| || ||
Sbjct 240 ATTCAGAAAGAGTCTACCCTCCACTTGGTGCTTCGTCTGCGTGGTGG 194
>seq736048
Length=1016
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| ||||| || || | || || ||||| |||||| | ||| ||| |
Sbjct 635 ATGCAAATTTTTGTGAAGACCCTCACTGGAAAAACTATTACCCTTGAAGTTGAGAGTTCA 576
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | || ||| || || ||||| || || | ||| || ||
Sbjct 575 GACACCATCGATAATGTGAAAGCTAAAATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 516
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || || || | ||| |||||||||||||| |||| | ||| ||||||| ||||||
Sbjct 515 CAGAGGCTCATATTTGCTGGTAAACAGCTGGAAGATGGTCGGACATTGGCGGACTACAAC 456
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481
|| || || |||||||| | ||| ||||
Sbjct 455 ATCCAGAAGGAATCTACCCTTCACTTGGT 427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 409037151769625
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |