Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq750760 118 7e-22 seq689433 116 2e-21 seq726932 113 3e-20 seq620935 113 3e-20 seq313781 109 4e-19 seq736048 105 4e-18 seq702768 98.7 6e-16 seq109077 86.0 4e-12 >seq750760 Length=1299 Score = 118 bits (130), Expect = 7e-22 Identities = 157/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||||||||| ||||| ||||| | |||| | || | || Sbjct 346 AGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTCCGGCCGTCC 287 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||| || || ||||||||||| | || | || |||||||| Sbjct 286 TCGAGCTGCTTCCCGGCGAATATGAGGCGTTGCTGGTCCGGAGGAATGCCTTCCTTGTCC 227 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| ||| || ||| || |||| |||||| Sbjct 226 TGGATCTTGGCCTTCAC--AT--TGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTTAT 171 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| ||||| ||||| || || ||||||||||| Sbjct 170 GGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 135 >seq689433 Length=414 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| ||| ||||||||||||||| || || | || | || |||| Sbjct 233 AGGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGTGTCCGACCATCC 174 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || ||||||||||| | ||||| ||| | || | |||||||||||| Sbjct 173 TCCAACTGCTTCCCTGCGAAGATCAGCCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCC 114 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| || || |||| | || | ||| || || | || || ||| Sbjct 113 TGAATTTTGGCCTTCACATTATCTATGGTATCTGAGCTCTCCACCTCTAGTGTGATCGTC 54 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| |||||||| ||||| |||||||| Sbjct 53 TTTCCCGTCAGGGTCTTCACAAATATCTGCAT 22 >seq726932 Length=530 Score = 113 bits (124), Expect = 3e-20 Identities = 156/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | ||| ||||||||| ||||| ||||| | |||| | || | || Sbjct 38 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCC 97 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || ||||| |||||||| || || |||||||| | || | || |||||||| Sbjct 98 TCCAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCC 157 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| ||| | || || || | |||||| Sbjct 158 TGGATCTTAGCCTTGAC--AT--TGTCGATGGTGTCAGACGATTCAACCTCTAGGGTTAT 213 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| ||||| ||||| || || ||||||||||| Sbjct 214 GGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 249 >seq620935 Length=1758 Score = 113 bits (124), Expect = 3e-20 Identities = 156/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | ||| ||||||||| || || ||||| | |||| | || | || Sbjct 38 AGCACCAGGTGGAGGGTTGACTCCTTCTGGATATTGTAGTCGGCTAGGGTTCGGCCGTCC 97 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || || |||||||| || || |||||||| |||| | || |||||||| Sbjct 98 TCCAGCTGTTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCT 157 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || ||||||| ||| | || || || | |||||| Sbjct 158 TGGATCTTGGCCTTGAC--AT--TATCGATCGTGTCAGATGATTCAACCTCTAGGGTTAT 213 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| ||||| |||||||| || || |||||||| Sbjct 214 GGTCTTCCCCGTTAGGGTCTTCACGAAAATCTGCAT 249 >seq313781 Length=385 Score = 109 bits (120), Expect = 4e-19 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||||| ||| | | | |||| ||||| ||||| |||||||| Sbjct 385 CTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCATCTTCCAGCTGCTTCCCGGCGAA 326 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||| | ||||| || | || | |||||||||||| | || ||| |||||| | Sbjct 325 GATCAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCCTGAATCTTTGCTTTGAC--A 268 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | |||| || || ||| || || | || ||||||||||| || || |||| Sbjct 267 T--TATCAATGGTGTCGGAACTCTCCACCTCCAGCGTGATGGTCTTTCCAGTCAGTGTCT 210 Query 34962 TTACAAAGATCTGCAT 34977 | || ||||| ||||| Sbjct 209 TCACGAAGATTTGCAT 194 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||||||||||||||| || || | || | ||| |||| Sbjct 177 AGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTTCGCCCATCC 118 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| |||||||| ||||||| ||||||||| | || | ||| |||||||| Sbjct 117 TCAAGCTGCTTGCCGGCGAAAATCAGTCTCTGCTGGTCTGGTGGAATCCCTTCCTTGTC 59 >seq736048 Length=1016 Score = 105 bits (116), Expect = 4e-18 Identities = 155/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||| ||| ||||| |||||||| || | | | || |||| Sbjct 652 AGAACCAAGTGAAGGGTGGACTCTTTCTGGATGTTATAATCAGCCAATGTCCGGCCATCC 711 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || || || || | ||||||||| | || | ||||||||||| Sbjct 712 TCGAGCTGCTTACCAGCAAATATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCC 771 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | |||||| |||||| || |||| || || | ||| || |||| ||| || Sbjct 772 TGGATTTTTGCTTTGAC--AT--TATCAATGGTGTCTGAGCTCTCAACTTCAAGGGTGAT 827 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || ||||| ||||||||||| ||||| || |||||| Sbjct 828 AGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCATG 864 Score = 102 bits (112), Expect = 5e-17 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || ||||| | || |||| ||||| ||| |||||||| ||||| ||||||| Sbjct 409 CCACCTCTCAAACGGAGAACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCCGCC 468 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | || |||| ||||| || || || || || || || | ||||||||| | || Sbjct 469 AATGTCCGACCATCTTCCAGCTGTTTACCAGCAAATATGAGCCTCTGCTGGTCTGGGGGA 528 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926 | ||||||||||| | ||||| ||| || || ||||||| || ||| Sbjct 529 ATACCCTCCTTGTCCTGGATTTTAGCTTTCAC--AT--TATCGATGGTGTCTGAACTCTC 584 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || |||| ||| || || ||||| ||||||||||| ||||| || |||||| Sbjct 585 AACTTCAAGGGTAATAGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCATG 636 >seq702768 Length=508 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| || ||||||||||||||| || || | || | || |||| Sbjct 312 AGAACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTCCGACCATCC 253 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || || ||||| || | ||||| ||| | || | ||| |||||||| Sbjct 252 TCCAACTGCTTCCCTGCAAAGATGAGCCTCTGCTGATCTGGAGGGATCCCTTCCTTGTCC 193 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | |||||| || || |||| | || | ||| || || | || || ||| Sbjct 192 TGAATTTTTGCCTTCACATTATCTATAGTGTCTGAGCTCTCAACCTCTAGTGTAATTGTC 133 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| |||||||| ||||| |||||||| Sbjct 132 TTTCCCGTCAGGGTCTTCACAAATATCTGCAT 101 >seq109077 Length=726 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| || ||| ||||||||||| || |||| || | || | || Sbjct 437 AGGACCAAGTGAAGTGTTGACTCTTTCTGAATGTTGTAATCCGCGAGAGTTCGGCCGTCT 496 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || ||||| ||||| | |||||||| | || | |||||||| || Sbjct 497 TCCAGCTGCTTCCCTGCGAAAATCAGCCTCTGCTGGTCCGGTGGAATGCCCTCCTTATCC 556 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||| ||| | || | || | ||||| || | || || ||| Sbjct 557 TGGATCTTAGCTTTCACGTTGTCAATGGTGTCGGAGCTTTCGACCTCTAGAGTAATTGTC 616 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || || || ||||| |||||||| Sbjct 617 TTTCCGGTCAGAGTTTTAACAAAAATCTGCAT 648 Score = 84.2 bits (92), Expect = 1e-11 Identities = 150/217 (69%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||| ||||||||||| || || | || | ||| |||| Sbjct 209 AGCACCAAGTGGAGGGTAGACTCTTTCTGAATGTTGTAATCAGCAAGAGTTCGCCCATCC 268 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || ||||| |||| | |||||||| | || | |||||||||||| Sbjct 269 TCAAGCTGCTTGCCCGCGAAAATCAACCTCTGCTGGTCCGGTGGAATCCCCTCCTTGTCC 328 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||| || || | ||||| || | ||| || || | ||| || Sbjct 329 TGAATCTTCGCTTTCAC--AT--TGTCGATGGTATCCGAGCTCTCAACCTCTAAGGTAAT 384 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || || | ||||| || |||||||||||| Sbjct 385 TGTCTTGCCAGTTAAAGTCTTCACGAAGATCTGCATG 421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322691451791375