Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq736048 91.5 1e-13 seq109077 89.7 4e-13 >seq736048 Length=1016 Score = 91.5 bits (100), Expect = 1e-13 Identities = 168/246 (68%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||||||||| || || | || || ||||| |||||| | ||| ||| | Sbjct 635 ATGCAAATTTTTGTGAAGACCCTCACTGGAAAAACTATTACCCTTGAAGTTGAGAGTTCA 576 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || ||| || || || || || || | ||| || ||| Sbjct 575 GACACCATCGATAATGTGAAAGCTAAAATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 516 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| |||||||||||||| || | ||| |||||||||||||| Sbjct 515 CAGAGGCTCATATTTGCTGGTAAACAGCTGGAAGATGGTCGGACATTGGCGGACTACAAC 456 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAAAAT 107795 || || ||||| ||||| | ||| |||| | | ||| |||| || || |||| Sbjct 455 ATCCAGAAGGAATCTACCCTTCACTTGGTTCTCCGTTTGAGAGGTGG----CATGCAAAT 400 Query 107796 ATTTGT 107801 |||||| Sbjct 399 ATTTGT 394 >seq109077 Length=726 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || || || || |||||||| ||||| || |||||| | || ||| ||| | Sbjct 420 ATGCAGATCTTCGTGAAGACTTTAACTGGCAAGACAATTACCTTAGAGGTTGAGAGCTCG 361 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| ||| | | || ||| |||||| || || || || | || ||| || Sbjct 360 -GATACCATCGACAATGTGAAAGCGAAGATTCAGGACAAGGAGGGGATTCCACCGGACCA 302 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| | |||| ||||| || ||||| ||||| | ||| | || || ||||| Sbjct 301 GCAGAGGTTGATTTTCGCGGGCAAGCAGCTTGAGGATGGGCGAACTCTTGCTGATTACAA 242 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 |||||| || |||||||| | ||| ||||| Sbjct 241 CATTCAGAAAGAGTCTACCCTCCACTTGGTG 211 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAA-CGGAGGCTG 107613 |||||| |||||||| |||||| | || || || || ||||| | || || | ||| Sbjct 649 AATGCAGATTTTTGTTAAAACTCTGACCGGAAAGACAATTACTCTAGAGGTCGAAAGCTC 590 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 ||| || | | | | || ||| ||||| ||||| || ||| | || ||| | Sbjct 589 -CGACACCATTGACAACGTGAAAGCTAAGATCCAGGATAAGGAGGGCATTCCACCGGACC 531 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 ||||||| || |||| || || || |||||||| |||| | ||| | ||||| |||| Sbjct 530 AGCAGAGGCTGATTTTCGCAGGGAAGCAGCTGGAAGACGGCCGAACTCTCGCGGATTACA 471 Query 107734 ACATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||||||| || ||||| || | ||| |||| Sbjct 470 ACATTCAGAAAGAGTCAACACTTCACTTGGT 440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395201041220125