Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq736048 113 1e-19 seq313781 111 4e-19 seq702768 109 1e-18 seq109077 105 2e-17 seq689433 102 2e-16 seq341406 93.3 1e-13 seq662336 84.2 5e-11 >seq736048 Length=1016 Score = 113 bits (124), Expect = 1e-19 Identities = 144/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| |||||||| ||||| | ||||| || || || ||||| | || Sbjct 848 AAGACCCTCACTGGAAAAACTATCACCCTTGAAGTTGAGAGCTCAGACACCATTGATAAT 789 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||||||| || || || || || || ||| || ||| || || ||||| || Sbjct 788 GTCAAAGCAAAA-ATCCAGGACAAGGAGGGTATTCCCCCAGACCAGCAGAGGCTTATATT 730 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || |||||| | || ||||| |||| ||||| ||||| ||| ||||||||||||| Sbjct 729 TGCTGGTAAGCAGCTCGAGGATGGCCGGACATTGGCTGATTATAACATCCAGAAAGAGTC 670 Query 206364 TACTCTTCACCTTGTT 206379 || |||||| | ||| Sbjct 669 CACCCTTCACTTGGTT 654 Score = 111 bits (122), Expect = 4e-19 Identities = 151/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| || || || || || ||||| ||||| | || || || ||||| ||| Sbjct 404 CAAATATTTGTGAAGACCCTTACTGGTAAAACTATCACCCTTGAGGTTGAGAGTTCAGAC 345 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || |||| || ||||||||| || || || || ||||| ||| || ||| || Sbjct 344 ACCATCGACAATGTGAAAGCAAAA-ATCCAGGACAAGGAAGGTATTCCACCCGACCAGCA 286 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || || ||||| || || |||||| | |||||||| | |||||||| || ||||| | Sbjct 285 GAGGCTAATCTTTGCTGGTAAGCAGCTAGAAGATGGTCGAACTTTGGCTGACTACAATAT 226 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||| || || || |||||||||||| Sbjct 225 ACAGAAGGAATCAACCCTTCACCTTGTT 198 Score = 87.8 bits (96), Expect = 4e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822 |||||||||||| || || || ||||| | ||| |||||||||||||| | |||||||| Sbjct 198 AACAAGGTGAAGGGTTGATTCCTTCTGTATATTGTAGTCAGCCAAAGTTCGACCATCTTC 257 Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCC 204848 |||||||| || || ||||| |||| Sbjct 258 TAGCTGCTTACCAGCAAAGATTAGCC 283 Score = 87.8 bits (96), Expect = 4e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822 ||| | |||||| || ||||| ||||||| ||||| |||||||| |||| ||||| || Sbjct 882 AACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAATCAGCCAATGTCCGGCCATCCTC 941 Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCC 204848 ||||||||| || || |||||||||| Sbjct 942 CAGCTGCTTACCAGCAAAGATAAGCC 967 Score = 84.2 bits (92), Expect = 5e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822 ||| | |||||| || ||||||||||||| ||||| |||||||| |||| ||||| || Sbjct 654 AACCAAGTGAAGGGTGGACTCTTTCTGGATGTTATAATCAGCCAATGTCCGGCCATCCTC 713 Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCC 204848 |||||||| || || || ||||||| Sbjct 714 GAGCTGCTTACCAGCAAATATAAGCC 739 >seq313781 Length=385 Score = 111 bits (122), Expect = 4e-19 Identities = 133/178 (75%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || ||||| || ||||| |||| ||||| ||||| ||||| | || Sbjct 209 AAGACACTGACTGGAAAGACCATCACGCTGGAGGTGGAGAGTTCCGACACCATTGATAAT 268 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || |||||||| |||||| || || || || || ||||| || || || ||||| Sbjct 269 GTCAAAGCAAA-GATTCAGGACAAGGAGGGGATCCCACCGGATCAGCAGAGGCTGATCTT 327 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 |||||| |||||| |||||||||| ||||| |||| || |||||| ||||||| ||| Sbjct 328 CGCCGGGAAGCAGCTGGAAGATGGGAGGACCCTGGCGGACTACAACATCCAGAAGGAG 385 >seq702768 Length=508 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || || || ||||| || || || | || || || || || ||| Sbjct 104 CAGATATTTGTGAAGACCCTGACGGGAAAGACAATTACACTAGAGGTTGAGAGCTCAGAC 163 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||| ||||| || || ||||| || || || || Sbjct 164 ACTATAGATAATGTGAAGGCAAAAATTCAGGACAAGGAAGGGATCCCTCCAGATCAGCAG 223 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||| || || ||||||||||| ||||| ||||| | || ||||||||| | Sbjct 224 AGGCTCATCTTTGCAGGGAAGCAGTTGGAGGATGGTCGGACTCTTGCTGATTACAACATT 283 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||||||||||||| | ||| | | ||||| Sbjct 284 CAGAAGGAGTCTACTCTTCACTTGGTTCTTCGTCTTCG 321 >seq109077 Length=726 Score = 105 bits (116), Expect = 2e-17 Identities = 146/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || || ||||| || || ||| | || || ||||| || ||| Sbjct 645 CAGATTTTTGTTAAAACTCTGACCGGAAAGACAATTACTCTAGAGGTCGAAAGCTCCGAC 586 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | || || ||||| || ||| || || || || || ||| |||||| || Sbjct 585 ACCATTGACAACGTGAAAGCTAA-GATCCAGGATAAGGAGGGCATTCCACCGGACCAGCA 527 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || || || ||||| || |||||| ||||||| || | ||| | || ||||||||| | Sbjct 526 GAGGCTGATTTTCGCAGGGAAGCAGCTGGAAGACGGCCGAACTCTCGCGGATTACAACAT 467 Query 206352 CCAGAAAGAGTCTACTCTTCAC 206373 ||||||||||| || |||||| Sbjct 466 TCAGAAAGAGTCAACACTTCAC 445 >seq689433 Length=414 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || || || ||||| |||||||| | || ||||| || || || Sbjct 25 CAGATATTTGTGAAGACCCTGACGGGAAAGACGATCACACTAGAGGTGGAGAGCTCAGAT 84 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| || ||||| || || || || || || || || Sbjct 85 ACCATAGATAATGTGAAGGCCAAAATTCAGGACAAGGAGGGGATCCCTCCAGATCAGCAG 144 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || |||||||| || ||||||||||| ||||| |||| | || ||||||||| | Sbjct 145 AGGCTGATCTTCGCAGGGAAGCAGTTGGAGGATGGTCGGACACTTGCTGATTACAACATT 204 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| ||||| ||||||||| Sbjct 205 CAGAAGGAGTCCACTCTTCAC 225 >seq341406 Length=202 Score = 93.3 bits (102), Expect = 1e-13 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| | | |||||||||||| ||||| |||||||| | ||| |||||||||||||| Sbjct 107 CGAAGGCGAAGAACAAGGTGAAGCGTAGATTCTTTCTGTATATTGTAGTCAGCCAAAGTG 166 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGC 204847 | ||||| || ||||| ||||| || ||||| ||| Sbjct 167 CGGCCATCCTCAAGCTGTTTTCCAGCAAAGATCAGC 202 >seq662336 Length=3756 Score = 84.2 bits (92), Expect = 5e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 206258 TTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGT 206317 |||| || || ||||| ||| || || || ||| | || || || || || || Sbjct 161 TTCAGGACAAGGAAGGCATTCCTCCTGATCAGCAGAGATTGATTTTTGCTGGCAAACAAC 220 Query 206318 TGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTG 206377 |||||||||| | ||| | || ||||| ||| |||| |||||||| || |||||||||| Sbjct 221 TGGAAGATGGTCGCACTCTTGCAGATTATAACATCCAAAAAGAGTCCACACTTCACCTTG 280 Query 206378 TTTTGAGACTT 206388 ||||||| ||| Sbjct 281 TTTTGAGGCTT 291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1170371495516125