Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq551508 322 1e-83 seq516297 288 3e-73 seq545415 199 1e-46 seq616439 170 6e-38 seq161073 118 3e-22 seq212858 98.7 3e-16 seq455454 93.3 1e-14 seq753951 89.7 2e-13 >seq551508 Length=510 Score = 322 bits (356), Expect = 1e-83 Identities = 371/494 (75%), Gaps = 4/494 (1%) Strand=Plus/Plus Query 19831 TTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGT 19890 ||||||||| || |||||||||||||| | || || | ||| | ||||||||| ||| Sbjct 17 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGCTATGCGCCCTTGGATTGTTGT 76 Query 19891 TGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGGTC 19949 ||| || || ||||| |||||||| || |||| | ||||| | ||||||| |||||| Sbjct 77 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTAT-TTTCTTGATCTACCCAATTGGTC 135 Query 19950 AGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGG 20009 | || ||||| | |||| ||||||| | | ||||| ||||| ||||||| |||| | | Sbjct 136 AAGGAAGCTTTTATGATGGTATGCCTCTAGAAATCTCTGGTACTTTCAACTTCATGATTG 195 Query 20010 TATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTG 20069 ||||||| | || || ||||| || |||||||| ||||||||| | | ||| ||||||| Sbjct 196 TATTCCAGGTTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGATGTAGCTGGTG 255 Query 20070 TATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TG 20128 ||||||| || || |||||||| || ||||| ||||| |||| || || | ||| | Sbjct 256 TATTCGGCGGTTCCCTATTCAGAGCTATGCATGGTTC-CTTGGTAACCTCTAGTTTGATA 314 Query 20129 CGTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAG 20188 | || || || || | ||| | || |||||||| || || ||||| ||||| Sbjct 315 AGGGAAACCACAAAAAATGAATCTGCTAATGCAGGTTACAAATTCGGTCAAGAGGAAGAA 374 Query 20189 ACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCT 20248 || ||||| || || || |||| ||||| ||||| || ||||| |||||||| ||| | Sbjct 375 ACTTATAATATTGTGGCTGCTCCAGGTTATTTTGGCCGATTGATATTCCAATATGCTAGT 434 Query 20249 TTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGG 20308 ||||| ||| ||||| || | |||||||| ||||| ||||| || ||||| || ||| Sbjct 435 TTCAATAATTCATGTTCTTTAAATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGG 494 Query 20309 TTCGCTGCCTTGGG 20322 ||| |||| || || Sbjct 495 TTCACTGCTTTAGG 508 >seq516297 Length=515 Score = 288 bits (318), Expect = 3e-73 Identities = 378/518 (73%), Gaps = 7/518 (1%) Strand=Plus/Minus Query 19961 TCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTCCAAGCC 20020 || |||| ||||||| | || ||||| ||||| ||||||| |||| | |||||| | || Sbjct 515 TCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCTAGGCT 456 Query 20021 GAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGG 20080 || || ||||| || |||||| | ||||||||| |||| | | ||||||||| ||||| Sbjct 455 GAGCACAACATCCTTATGCACTCATTCCACATG-TTGGCATAGTTGGTGTATTTGGTGGT 397 Query 20081 TCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAGACTAC 20139 || |||||||||| ||||| ||||| | || || || | | ||| | | || || | Sbjct 396 TCCCTATTCAGTGTTATGCATGGTTCATTGGTAACCTC-TAGTTTGATTAGGGAAACCAT 338 Query 20140 TGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACAT 20199 ||| | ||| | ||| ||||||| || | ||||| ||||| || ||||| || Sbjct 337 AGAAAATGAATCTGCGAATGTAGGTTACACATTCGATCAAGATGAAGAAACTTATAATAT 278 Query 20200 CGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAG 20259 || ||||||||||| | ||| || ||||| |||||||| ||| ||||| ||| Sbjct 277 TACGGCTGCTCATGGTTATTCTGGTCGATTGATTTTCCAATATGCTATATTCAATAATTC 218 Query 20260 CCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTT 20319 |||||| |||| |||||||| | ||| ||||| | ||||| || |||||| ||| || Sbjct 217 TCGTTCTTTACATTTCTTCCTAGTTGCTTGGCCTATAGTAGGTATCTGGTTCATTGCTTT 158 Query 20320 GGGCGTTTCTACAAT--GGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTC 20377 || | || ||| | | | || | || || |||||||| || ||||| || | | Sbjct 157 AGG--TATCAACACTCTGACTTTCTACCTAAATGGTTTCAATTTCAACCAATCTATAGTT 100 Query 20378 GACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGG 20437 || | | ||| |||| ||| |||||| |||||| ||| | ||||||||||| || || Sbjct 99 GATAGTCAAGGTTGTGTAATTAATACTTAGGCTGATATTATAAATCGTGCTAACCTTGGT 40 Query 20438 TTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCC 20475 | || || ||||||||||| ||||||||||| ||||| Sbjct 39 ATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCC 2 >seq545415 Length=298 Score = 199 bits (220), Expect = 1e-46 Identities = 223/298 (75%), Gaps = 0/298 (0%) Strand=Plus/Plus Query 20171 TTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTG 20230 || || ||||| ||||| || ||||| || || || ||||||||||| ||||| | ||| Sbjct 1 TTCGGTCAAGAGGAAGAAACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCTGATTG 60 Query 20231 ATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGG 20290 |||||| |||| ||| |||| | ||| |||||| |||| |||||| | ||||| ||| Sbjct 61 ATCTTCTAATATGCTAGTTTCTATAATTCTCGTTCTTTACATTTCTTCATAGCTGCTTGG 120 Query 20291 CCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAAC 20350 | || ||||| || |||||| ||| || || | || ||| | || || || || Sbjct 121 CTTGTAGTAGGTATCTGGTTCATTGCTTTAGGTATCGGCACTATGACTTTCAACCTAAAT 180 Query 20351 GGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCT 20410 |||||||| |||||||| || | | || | | | |||||||| ||| ||||||||||| Sbjct 181 GGTTTCAATTTTAACCAATCTATAGTTGATAGCCAAGGTCGTGTAATTAATACTTGGGCT 240 Query 20411 GACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATA 20468 || || |||| |||||||| || || | || || ||||||||| | |||||||||| Sbjct 241 GATTTTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAATGTAATGCTCATA 298 >seq616439 Length=1776 Score = 170 bits (188), Expect = 6e-38 Identities = 248/348 (71%), Gaps = 2/348 (1%) Strand=Plus/Plus Query 19955 AGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTC 20014 ||||||| |||| ||||||||| || ||||| |||| ||||||| |||| | |||||| Sbjct 182 AGCTTCTATGATGATATGCCTTTAGGAATCTCTAGTACTTTCAACTTCATGATTGTATTC 241 Query 20015 CAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTC 20074 | | || || ||||| || ||||||| |||||| || | ||||| | ||||||||| Sbjct 242 TAGGTTGAGCACAACATCCTTATGCACCTATTCCACTTGTTAGGTGTAGTTGGTGTATTT 301 Query 20075 GGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTG-A 20133 | || ||| |||||| || ||||| |||| | || || | | | ||| | | | Sbjct 302 GATGAGTCTTTATTCAATGTTATGCATGGTTTCTTGGTAACCTT-TAGTTTGATCAAGGA 360 Query 20134 GACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTA 20193 || || || | ||| | || || |||||||| || | ||||| ||||| || || Sbjct 361 AACCACAAAAAATGAATTTGTTAATTAAGGTTACAAATTCGATCAAGATGAAGAAACTTA 420 Query 20194 TAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAA 20253 ||| ||||||| ||||||||||| ||| | || ||||| || ||||| | | ||| | Sbjct 421 TAATATCGTAGTTGCTCATGGTTATTTTAGTCGATTGATTTTTCAATATGGTAGTTTGGA 480 Query 20254 CAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGG 20301 | | |||||| |||| |||||| | | || |||| || ||||| Sbjct 481 TATTTCTCGTTCTTTACATTTCTTCATAGTTGTTTGGCATGTAGTAGG 528 >seq161073 Length=246 Score = 118 bits (130), Expect = 3e-22 Identities = 174/244 (71%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 19761 TTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTG 19820 ||||||||||| | ||||| || || || | | || | || | |||| | | ||| Sbjct 4 TTGATGAATGGTTATACAATGGTGGCCCTTATGAGCTAATTGTTCTACACTACTTACTTG 63 Query 19821 GCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTT 19880 | | | ||||||||| || |||| ||||||||| | | ||||| ||| | || Sbjct 64 GTGTAGCTTTTTACATGGGTCGTGAGTAGGAACTTAGTTTCCATCTAGGTATGCACCATT 123 Query 19881 GGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTAC 19939 ||||| |||||| || | ||||| ||||||| | |||| || ||||| | ||||| Sbjct 124 GGATTGTTGTTGCATATTTAGCTCCTATTGCAGCTACTACTGCTGT-TTTCTTGATCTAC 182 Query 19940 CCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAAC 19999 || ||||| | || ||||| || |||| ||||||| | || ||||| ||||| |||||| Sbjct 183 CCAATTGGTTAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAAC 242 Query 20000 TACA 20003 | || Sbjct 243 TTCA 246 >seq212858 Length=258 Score = 98.7 bits (108), Expect = 3e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 20354 TTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGAC 20413 ||||| || ||||| || | | || | | | |||||||| ||| |||||||| |||| Sbjct 258 TTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGTGTAATTAATACTTGGACTGAT 199 Query 20414 ATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTC 20473 ||| |||| |||||||| || || | | || ||||||||||| ||||||||||| ||| Sbjct 198 ATTATCAACCGTGCTAACCTTGGTATGAAAGTTATGCATGAACGTAATGCTCATAATTTC 139 Query 20474 CCACTTGACCTTGC 20487 || || || || || Sbjct 138 CCTCTAGATCTAGC 125 >seq455454 Length=251 Score = 93.3 bits (102), Expect = 1e-14 Identities = 85/106 (80%), Gaps = 1/106 (1%) Strand=Plus/Plus Query 20009 GTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGT 20068 |||||||| || || || ||||| || |||||||| ||||||||| | || | | |||| Sbjct 4 GTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCTTAGTTGGT 63 Query 20069 GTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTA 20114 ||||||| || || |||||||||| ||||||||||| |||| || Sbjct 64 GTATTCGACGGTTCCCTATTCAGTGTTATGCACGGTTC-CTTGGTA 108 >seq753951 Length=5828 Score = 89.7 bits (98), Expect = 2e-13 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 19845 AGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTC 19904 ||||||||||||| | | | |||| ||| | ||||||||| |||| | || || ||| Sbjct 1779 AGTGGGAACTTAGATTTTGTCTAGATATGCGTCCTTGGATTGTTGTTACATATTCAACTC 1720 Query 19905 CGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGGTCAGGGTAGCTTCTCC 19963 |||| || | || || ||||| | || ||| | ||||| | | ||| || Sbjct 1719 TTGTTGTAGTTACTATTGTTGT-TTTCTTGATCAACCTAATCGGTCAATGAAACTTTTCT 1661 Query 19964 GATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAA 20023 ||| |||| || | || | || ||||| ||||||| |||| | |||||||| || || Sbjct 1660 AATGGTATGTCTCTAGGACTTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAG 1601 Query 20024 CATAACATTCTCATGCACCCGTTCCACA 20051 | | ||||| |||||||| ||||||| Sbjct 1600 TACATCATTCCTATGCACCCATTCCACA 1573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147492468530250