Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq551508 320 5e-83 seq516297 284 3e-72 seq545415 196 1e-45 seq161073 114 4e-21 seq455454 105 2e-18 seq212858 105 2e-18 seq753951 98.7 3e-16 seq666543 96.9 1e-15 seq711014 86.0 2e-12 seq493281 82.4 2e-11 >seq551508 Length=510 Score = 320 bits (354), Expect = 5e-83 Identities = 361/481 (75%), Gaps = 2/481 (0%) Strand=Plus/Plus Query 19050 TTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGT 19109 ||||||||| || |||||||||||||| | || || | ||||||||||||||| ||| Sbjct 17 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGCTATGCGCCCTTGGATTGTTGT 76 Query 19110 TGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCA 19169 ||| || |||||||||||||| || || |||| | ||| | |||| ||| ||||||| Sbjct 77 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTATTTTCTTGATCTACCCAATTGGTCA 136 Query 19170 AGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGT 19229 ||| |||| || | ||||||| | | || |||||| ||||||| |||| |||| Sbjct 137 AGGAAGCTTTTATGATGGTATGCCTCTAGAAATCTCTGGTACTTTCAACTTCATGATTGT 196 Query 19230 ATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGT 19289 |||||||| ||| || |||||||| |||||||| ||||||||| | | ||| |||||||| Sbjct 197 ATTCCAGGTTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGATGTAGCTGGTGT 256 Query 19290 GTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TGC 19348 |||||||| || ||||| || || ||||| ||||| |||| || || | ||| | Sbjct 257 ATTCGGCGGTTCCCTATTCAGAGCTATGCATGGTTC-CTTGGTAACCTCTAGTTTGATAA 315 Query 19349 GTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGA 19408 | ||||| || || | | |||| || || ||||| || || ||||| ||||| | Sbjct 316 GGGAAACCACAAAAAATGAATCTGCTAATGCAGGTTACAAATTCGGTCAAGAGGAAGAAA 375 Query 19409 CTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCT 19468 ||||||| ||||| ||||||| || |||||||| || | || ||||| || || | Sbjct 376 CTTATAATATTGTGGCTGCTCCAGGTTATTTTGGCCGATTGATATTCCAATATGCTAGTT 435 Query 19469 TCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGT 19528 |||| ||| ||||| || ||||||| | |||||||||||||| || || || |||| Sbjct 436 TCAATAATTCATGTTCTTTAAATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGT 495 Query 19529 T 19529 | Sbjct 496 T 496 >seq516297 Length=515 Score = 284 bits (314), Expect = 3e-72 Identities = 370/508 (73%), Gaps = 3/508 (1%) Strand=Plus/Minus Query 19188 TATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAA 19247 ||||||| | || || |||||| ||||||| |||| |||||||| ||||||| || || Sbjct 507 TATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCTAGGCTGAGCACAA 448 Query 19248 CATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATT 19307 |||||| |||||| | ||||||||| | || | | |||||| || || || || ||||| Sbjct 447 CATCCTTATGCACTCATTCCACATGTT-GGCATAGTTGGTGTATTTGGTGGTTCCCTATT 389 Query 19308 TAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGG 19366 |||| ||||| ||||| | || || || | | ||| | | ||||| | ||| | | Sbjct 388 CAGTGTTATGCATGGTTCATTGGTAACCTC-TAGTTTGATTAGGGAAACCATAGAAAATG 330 Query 19367 TATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTG 19426 |||| ||| || |||| || | ||||| ||||| |||||||| ||| |||| Sbjct 329 AATCTGCGAATGTAGGTTACACATTCGATCAAGATGAAGAAACTTATAATATTACGGCTG 270 Query 19427 CTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTC 19486 ||||||| |||| |||||| | |||||||| || || ||||| ||| |||||| Sbjct 269 CTCATGGTTATTCTGGTCGATTGATTTTCCAATATGCTATATTCAATAATTCTCGTTCTT 210 Query 19487 TACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAA 19546 |||||||||| | | |||||||||| | || || || ||||| || | || | | Sbjct 209 TACATTTCTTCCTAGTTGCTTGGCCTATAGTAGGTATCTGGTTCATTGCTTTAGGTATCA 150 Query 19547 GCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATG 19606 ||| || | ||| || | ||||| || || || ||||| || | |||| | | | Sbjct 149 ACACTCTGACTTTCTACCTAAATGGTTTCAATTTCAACCAATCTATAGTTGATAGTCAAG 90 Query 19607 GTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAA 19666 || |||| ||| |||||| |||||| ||| | |||||||||||||| || | || || | Sbjct 89 GTTGTGTAATTAATACTTAGGCTGATATTATAAATCGTGCTAACCTTGGTATGGAAGTTA 30 Query 19667 TGCACGAACGTAATGCTCATAACTTCCC 19694 |||| ||||||||||||||||| ||||| Sbjct 29 TGCATGAACGTAATGCTCATAATTTCCC 2 >seq545415 Length=298 Score = 196 bits (216), Expect = 1e-45 Identities = 222/298 (74%), Gaps = 0/298 (0%) Strand=Plus/Plus Query 19390 TTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTT 19449 || || ||||| ||||| |||||||| ||||| ||||||||||| |||||||| | | Sbjct 1 TTCGGTCAAGAGGAAGAAACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCTGATTG 60 Query 19450 ATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGG 19509 || ||| | || || ||| | ||| |||||| |||||||||| | ||||||||| Sbjct 61 ATCTTCTAATATGCTAGTTTCTATAATTCTCGTTCTTTACATTTCTTCATAGCTGCTTGG 120 Query 19510 CCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAAT 19569 | ||| || || || ||||| || | || | |||| ||| | |||||| | ||| Sbjct 121 CTTGTAGTAGGTATCTGGTTCATTGCTTTAGGTATCGGCACTATGACTTTCAACCTAAAT 180 Query 19570 GGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCT 19629 || || || |||||||| || | |||| | | | |||||||| ||| ||||||||||| Sbjct 181 GGTTTCAATTTTAACCAATCTATAGTTGATAGCCAAGGTCGTGTAATTAATACTTGGGCT 240 Query 19630 GACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATA 19687 || || |||| ||||||||||| || | || || ||||| ||| |||||||||||| Sbjct 241 GATTTTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAATGTAATGCTCATA 298 >seq161073 Length=246 Score = 114 bits (126), Expect = 4e-21 Identities = 171/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 18980 TTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTG 19039 ||||||||||| | ||||| || || || | | || | || | |||| | | ||| Sbjct 4 TTGATGAATGGTTATACAATGGTGGCCCTTATGAGCTAATTGTTCTACACTACTTACTTG 63 Query 19040 GCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTT 19099 | || | ||||||||| || |||| ||||||||| | | ||||| |||| || || Sbjct 64 GTGTAGCTTTTTACATGGGTCGTGAGTAGGAACTTAGTTTCCATCTAGGTATGCACCATT 123 Query 19100 GGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATC 19159 ||||| |||||| || | ||||||| |||| || | |||| || ||| | |||| | Sbjct 124 GGATTGTTGTTGCATATTTAGCTCCTATTGCAGCTACTACTGCTGTTTTCTTGATCTACC 183 Query 19160 CATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACT 19219 || ||||| |||| |||| || | ||||||| | || || |||||| ||||||| Sbjct 184 CAATTGGTTAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACT 243 Query 19220 ACA 19222 || Sbjct 244 TCA 246 >seq455454 Length=251 Score = 105 bits (116), Expect = 2e-18 Identities = 89/108 (82%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 19226 TTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTG 19285 |||||||||||||||| || |||||||| |||||||| ||||||||| | || | | || Sbjct 2 TTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCTTAGTTG 61 Query 19286 GTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTA 19333 |||| |||| ||| || ||||| |||| ||||||||||| |||| || Sbjct 62 GTGTATTCGACGGTTCCCTATTCAGTGTTATGCACGGTTC-CTTGGTA 108 >seq212858 Length=258 Score = 105 bits (116), Expect = 2e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 19573 TTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGAC 19632 || || || ||||| || | |||| | | | |||||||| ||| |||||||| |||| Sbjct 258 TTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGTGTAATTAATACTTGGACTGAT 199 Query 19633 ATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTC 19692 ||| |||| ||||||||||| || | | || ||||| ||||||||||||||||| ||| Sbjct 198 ATTATCAACCGTGCTAACCTTGGTATGAAAGTTATGCATGAACGTAATGCTCATAATTTC 139 Query 19693 CCACTTGATTTGGCTA 19708 || || ||| | |||| Sbjct 138 CCTCTAGATCTAGCTA 123 >seq753951 Length=5828 Score = 98.7 bits (108), Expect = 3e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 19064 AGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTC 19123 ||||||||||||| | | | |||| ||||| ||||||||| |||| | || ||| ||| Sbjct 1779 AGTGGGAACTTAGATTTTGTCTAGATATGCGTCCTTGGATTGTTGTTACATATTCAACTC 1720 Query 19124 CTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCG 19183 ||||| | | || || ||| | || | | | | |||||| | |||| Sbjct 1719 TTGTTGTAGTTACTATTGTTGTTTTCTTGATCAACCTAATCGGTCAATGAAACTTTTCTA 1660 Query 19184 ACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAAC 19243 | | |||| || | || || |||||| ||||||| |||| |||||||||||||||| Sbjct 1659 ATGGTATGTCTCTAGGACTTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGT 1600 Query 19244 ATAACATCCTCATGCACCCGTTCCACA 19270 | | ||| | |||||||| ||||||| Sbjct 1599 ACATCATTCCTATGCACCCATTCCACA 1573 >seq666543 Length=3475 Score = 96.9 bits (106), Expect = 1e-15 Identities = 158/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 18949 CACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCG 19008 || || || ||||| |||||||| || ||||||||| | | ||||| | || || Sbjct 2113 CATTTTTATCCAATATGGGAAGCCGCATCTGTTGATGAATAGTTATACAATGATGGTCCT 2172 Query 19009 TTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGG 19068 | | || | ||| | |||||| | || | || | ||||||||| || |||||| Sbjct 2173 TATAAGCTAATTGTCCTACACTTCTTATTTAGTGTAGCTTGTTACATGGGTCGTGAGTGG 2232 Query 19069 GAACTTAGCTATCGACTAGGG-ATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGT 19127 |||||||| | || | | ||| ||||||| || |||| |||| | || |||||| |||| Sbjct 2233 GAACTTAG-TTTCCATTTGGGTATGCGCCTTTAGATTGTTGTTACATATTCAGCTTCTGT 2291 Query 19128 TGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGG 19172 | | || | ||| || ||| | |||| ||| |||||||||| Sbjct 2292 TACAGCTACTACTGTTGTTTTCTTGATCTACCCAATTGGTCAAGG 2336 >seq711014 Length=229 Score = 86.0 bits (94), Expect = 2e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 19206 TGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTT 19265 |||||| ||||||| ||| |||||||||||||||| || |||||||| |||||||| || Sbjct 157 TGGTACCTTCAACTTCATTATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATT 216 Query 19266 CCACATG 19272 ||||||| Sbjct 217 CCACATG 223 >seq493281 Length=200 Score = 82.4 bits (90), Expect = 2e-11 Identities = 140/201 (70%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 18868 GAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCG 18927 || |||||| | || ||| |||||||||||||| || || || || ||| || |||| Sbjct 199 GAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATCTCTGGTGCCATCATTCCT 140 Query 18928 AG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATG 18985 | | ||| || || || | ||||| |||||||| | |||||| | || |||||| Sbjct 139 ACTTCTGCA--GCTATAGGTTTGCACTTTTACCCAATATAGGAAGCAACATCCGTTGATG 82 Query 18986 AATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCT 19045 ||||| | ||||| || || || | | || | || | |||||| | |||| || Sbjct 81 AATGGTTATACAATGGTGGTCCTTATAAGCTAATTGTTCTACACTTCTTACTTGGTGTAG 22 Query 19046 ATGCTTACATGGGACGCGAGT 19066 | ||||||||| || |||| Sbjct 21 CTTGTTACATGGGTCGTGAGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139881427130250