Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq109077 123 2e-23 seq726932 116 3e-21 seq689433 113 4e-20 seq736048 107 2e-18 seq702768 107 2e-18 seq313781 105 6e-18 seq620935 104 2e-17 >seq109077 Length=726 Score = 123 bits (136), Expect = 2e-23 Identities = 146/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || |||||||||||||| || | ||||| |||| ||||||||||| || || || Sbjct 457 CTCTTTCTGAATGTTGTAATCCGCGAGAGTTCGGCCGTCTTCCAGCTGCTTCCCTGCGAA 516 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||||| |||| || |||||| ||| |||| || |||| || Sbjct 517 AATCAGCCTCTGCTGGTCCGGTGGAATGCCCTCCTTATCCTGGATC-TTAGCTTTCACGT 575 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| ||| ||||| | || || || || || |||| |||||| | Sbjct 576 TGTCAATGGTGTCGGAGCTTTCGACCTCTAGAGTAATTGTCTTTCCGGTCAGAGTTTTAA 635 Query 35724 CAAATATCTGCATTC 35738 |||| |||||||||| Sbjct 636 CAAAAATCTGCATTC 650 Score = 118 bits (130), Expect = 9e-22 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | ||| ||| || |||||||||||||| || Sbjct 194 CCACCACGCAGACGAAGCACCAAGTGGAGGGTAGACTCTTTCTGAATGTTGTAATCAGCA 253 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||||| | || || |||||||| ||||| || ||||||| ||||||||||| ||| Sbjct 254 AGAGTTCGCCCATCCTCAAGCTGCTTGCCCGCGAAAATCAACCTCTGCTGGTCCGGTGGA 313 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | |||||||||| ||||| |||| | | | | || || |||| || Sbjct 314 ATCCCCTCCTTGTCCTGAATCTTCGCTTTCACATTGTCGATGGTATCCGAGCTC---TCA 370 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | || || || || || || ||||| ||||| || |||||||| Sbjct 371 ACCTCTAAGGTAATTGTCTTGCCAGTTAAAGTCTTCACGAAGATCTGCAT 420 Score = 109 bits (120), Expect = 5e-19 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || |||| ||| | | | || ||||||||||| || || || Sbjct 1 CTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCATCTTCCAGCTGCTTCCCAGCGAA 60 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| | |||||| |||| || | | ||||||||| |||||| |||| | | Sbjct 61 GATCAATCTCTGCTGATCCGGTGGGATCCCTTCCTTGTCCTGAATCTTTGCTTTCACATT 120 Query 35665 TGCCACCGTGTCG---CTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | |||||| ||| |||||||||| |||||| || || || |||| ||| || Sbjct 121 ATCAATGGTGTCGGAACTC---TCCACCTCCAGCGTGATGGTCTTCCCAGTCAGAGTCTT 177 Query 35722 CACAAATATCTGCAT 35736 ||| || || ||||| Sbjct 178 CACGAAGATTTGCAT 192 >seq726932 Length=530 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | |||||| |||| |||||||| || || || || Sbjct 58 CTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCCAGCTGTTTTCCAGCGAA 117 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || ||||||||| |||||| ||| | | | Sbjct 118 GATGAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATT 177 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| |||||| ||||| | || || || || ||||| | |||||||| Sbjct 178 GTCGATGGTGTCAGACGATTCAACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCAC 237 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 238 GAAGATCTGCAT 249 >seq689433 Length=414 Score = 113 bits (124), Expect = 4e-20 Identities = 145/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||| || | || || | || |||| |||||| || || || Sbjct 213 CTCCTTCTGAATGTTGTAATCAGCAAGTGTCCGACCATCCTCCAACTGCTTCCCTGCGAA 154 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAG 35663 |||| || |||||| || | ||| | | |||||||||| ||| ||| | ||||| | Sbjct 153 GATCAGCCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCC-TGAATTTTGGCCTTCACAT 95 Query 35664 TTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 | | | || || |||| |||||||| | |||||||| || ||||||| || | Sbjct 94 TATCTATGGTATCTGAGCTC---TCCACCTCTAGTGTGATCGTCTTTCCCGTCAGGGTCT 38 Query 35721 TCACAAATATCTGCAT 35736 |||||||||||||||| Sbjct 37 TCACAAATATCTGCAT 22 >seq736048 Length=1016 Score = 107 bits (118), Expect = 2e-18 Identities = 143/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || || ||||| || ||||| ||||| | || || ||||||||||| ||||| Sbjct 217 TCCTTCTGTATATTGTAGTCAGCCAAAGTTCGACCATCTTCTAGCTGCTTACCAGCAAAG 276 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGT 35664 || | || ||||||||| | |||| | ||||||||| ||| |||||| |||| | | Sbjct 277 ATTAGCCTCTGCTGGTCGGGTGGAATACCTTCCTTGTCCTGGAT-TTTTGCTTTCACATT 335 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||||| ||| || ||||| | ||||| |||||||| || | || || Sbjct 336 GTCGATGGTGTCTGAACTC---TCAACCTCAAGGGTGATAGTTTTACCAGTAAGGGTCTT 392 Query 35722 CACAAATATCTGCAT 35736 ||||||||| ||||| Sbjct 393 CACAAATATTTGCAT 407 Score = 102 bits (112), Expect = 7e-17 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| ||||| ||||| || || | || |||||||||||||| ||||| Sbjct 900 CTCCTTCTGGATGTTATAATCAGCCAATGTCCGGCCATCCTCCAGCTGCTTACCAGCAAA 959 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCA 35660 || | || ||||||||| | ||||| | |||||||||| ||||||| ||||| Sbjct 960 GATAAGCCTCTGCTGGTCTGGAGGAATACCCTCCTTGTCCTGGATCTTTGCCTTCA 1015 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||| ||||| ||||| || || | || || ||||||||||| ||||| Sbjct 672 CTCTTTCTGGATGTTATAATCAGCCAATGTCCGGCCATCCTCGAGCTGCTTACCAGCAAA 731 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663 ||| | || ||||||||| | |||| | |||||||||| ||| |||||| || | | Sbjct 732 TATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGAT-TTTTGCTTTGACAT 790 Query 35664 TTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 | | | ||||| |||| || || || | ||||| ||||| || || | || | Sbjct 791 TATCAATGGTGTCTGAGCTC---TCAACTTCAAGGGTGATAGTTTTTCCAGTGAGGGTCT 847 Query 35721 TCACAAATATCTGCAT 35736 ||||||| || ||||| Sbjct 848 TCACAAAAATTTGCAT 863 >seq702768 Length=508 Score = 107 bits (118), Expect = 2e-18 Identities = 154/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| |||||| |||||||||||||| || | || || | || ||| Sbjct 309 ACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTCCGACCATCCTCC 250 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 | |||||| || ||||| || | || |||||| || | ||| | | ||||||||| || Sbjct 249 AACTGCTTCCCTGCAAAGATGAGCCTCTGCTGATCTGGAGGGATCCCTTCCTTGTCC-TG 191 Query 35648 ATCTTTTG-CTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGT 35703 | ||||| ||||| | | | | ||||| |||| || ||||| | || || || Sbjct 190 AATTTTTGCCTTCACATTATCTATAGTGTCTGAGCTC---TCAACCTCTAGTGTAATTGT 134 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||||| || ||||||||||||||||| Sbjct 133 CTTTCCCGTCAGGGTCTTCACAAATATCTGCAT 101 >seq313781 Length=385 Score = 105 bits (116), Expect = 6e-18 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || |||| ||| | | | || ||||||||||| || || || Sbjct 385 CTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCATCTTCCAGCTGCTTCCCGGCGAA 326 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| |||| || | | |||||||||| |||||| || | | | Sbjct 325 GATCAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCCTGAATCTTTGCTTTGACATT 266 Query 35665 TGCCACCGTGTCG---CTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | |||||| ||| |||||||||| |||||| || || || |||| || || Sbjct 265 ATCAATGGTGTCGGAACTC---TCCACCTCCAGCGTGATGGTCTTTCCAGTCAGTGTCTT 209 Query 35722 CACAAATATCTGCAT 35736 ||| || || ||||| Sbjct 208 CACGAAGATTTGCAT 194 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | ||| |||||| |||||||||||||| || | |||||| | || || Sbjct 175 CACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTTCGCCCATCCTC 116 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || |||| | ||||||||| | |||| | ||||||||| Sbjct 115 AAGCTGCTTGCCGGCGAAAATCAGTCTCTGCTGGTCTGGTGGAATCCCTTCCTTGTCCTG 56 Query 35647 GATCTT 35652 ||||| Sbjct 55 AATCTT 50 >seq620935 Length=1758 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || ||||| ||||| | |||||| |||| |||||||| || || || || Sbjct 58 CTCCTTCTGGATATTGTAGTCGGCTAGGGTTCGGCCGTCCTCCAGCTGTTTGCCAGCGAA 117 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || |||||||| |||||| ||| | | | Sbjct 118 GATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 177 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| ||||| ||||| | || || || || ||||| | || ||||| Sbjct 178 ATCGATCGTGTCAGATGATTCAACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTCTTCAC 237 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 238 GAAAATCTGCAT 249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446532896115000