Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq681135 120 3e-22 >seq681135 Length=1827 Score = 120 bits (132), Expect = 3e-22 Identities = 360/553 (65%), Gaps = 2/553 (0%) Strand=Plus/Minus Query 59562 TTTCCTATACGGTACCCGGATCTGTGGGCCCTGTATAAGAAAGCGATCGGTTCATTCTGG 59621 || || || | |||||| | | |||| |||| ||||| || | || || ||| Sbjct 1140 TTCCCGATTCAGTACCCTGCAGTCTGGGAAATGTACAAGAAGGCCGAGGCGTCGTTTTGG 1081 Query 59622 TCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGCTCAATTACGAC 59681 ||| |||||| | |||||| | |||| | | ||||| || |||| |||| Sbjct 1080 ACCGCCGAGGAAGTCGACCTCTCTCAGGACCAGCGTCAATGGGAAAACCTCACCAGCGAC 1021 Query 59682 GAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATG 59741 ||| |||| ||||||| |||| ||||||||||| || ||| ||||| || | Sbjct 1020 GAGAAGCACTTCATCAGTCATATCCTTGCCTTCTTCGCCGCTTCTGACGGAATCGTCCTC 961 Query 59742 GAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTAC 59801 |||||| | | | | || ||||| |||||| | ||||||| || | ||||| Sbjct 960 GAAAATCTCGCCGGAAGGTTCATGAAGGAGGTCCAGGTCTCCGAGGCTCGTGCCTTCTAT 901 Query 59802 GCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTCATGATCGATAAG 59861 | | |||| || || |||||||| |||| |||| || || | || | Sbjct 900 GGATTTCAGATTGCCATTGAAAACATCCACTCTGAGATGTACAGTCTGTTGTTAGAATCG 841 Query 59862 TTGGTCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAGAGACGTCCCCCGCA 59921 | |||||||||| | ||||| | || || | || || || || |||| Sbjct 840 TATATCAAGGATCCAAAGGAGAAAAACAGGCTCTTTCACGCAATCGATACCATCCCCTGT 781 Query 59922 GTTAAACAAAAAGCAGAATGGGCCATGCAGTGGAT-GAGTCCTGGAGCATCATTTGCACA 59980 || | ||||| | ||||| | | ||||| || || | | | ||||| | Sbjct 780 GTGGCGAAGAAAGCCCAGTGGGCTCTCCGATGGATCGACGGCTCC-GAAACCTTTGCCGA 722 Query 59981 ACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTAT 60040 ||| || | || || || ||||||||||| ||||||||||| || ||||| | || Sbjct 721 ACGCCTGCTCGCATTCGCCTGCGTGGAAGGCATCTTCTTCTCCGGAAGCTTCTGCTCGAT 662 Query 60041 TTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTC 60100 |||||||| || || || || ||||||||||| | | |||||| || ||| | || || Sbjct 661 ATTCTGGCTAAAGAAACGCGGTCTCATGCCGGGATTAACTTTCTCAAATGAGTTAATCTC 602 Query 60101 CCGGGACGAGGGC 60113 || ||||||||| Sbjct 601 GCGAGACGAGGGC 589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543340383570000