Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq5092 131 2e-25 seq242768 100 4e-16 >seq5092 Length=1596 Score = 131 bits (144), Expect = 2e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 ||||| ||||| | ||| | |||||||| ||| | || | | ||| |||| |||||| Sbjct 1263 CCTCCTTGATCAACATAACGGGCAGTGTCATTGAACACCCGTAGCATAGGAACAATGCCA 1204 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 || ||||| |||||||||||| |||||||||||| |||||||| ||| || ||| Sbjct 1203 TTGGATGTCCCATTTGTTCCACGAATATAACTTCCTGTGGCACGAATGTTATGAACAGAA 1144 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || |||||||| || || ||| | |||||| || | |||||||| || Sbjct 1143 ACACCAATTCCTCCAGCAGACTTGCTGATAACAGCACACTCCTTTAGAGTGTCATATATT 1084 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTA 76975 || || ||||||||||| ||||| || ||| || |||||| Sbjct 1083 CCTTCAATACTATCATCTTTCATGCAAATAAGGAAGCAGCTA 1042 Score = 93.3 bits (102), Expect = 6e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 ||||||||||| || | || || || |||||||||||||| | ||| | || || | Sbjct 848 GTTCCTGCATTGAAAAGAGTGGGTGAAGCATGAGTGAACCAACGCTGAGACATTAAATGG 789 Query 77054 TATGTTTCAATAACTGCTTCTATATC-CCATTGATGAATTCCTACAGCGACACGCATCAA 77112 ||||||| ||| | | || || || | ||| |||||||| |||| || | |||||| Sbjct 788 TATGTTTTGATAGCAGAATCAATGTCATCCTTG-TGAATTCCAACAGAAACTCTCATCAA 730 Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172 ||| |||||||| | ||||||| ||| | || |||| | || || | || | Sbjct 729 CATGTGCTGAGGCCTTTCTACAACCTTCCCTTGAATCTTCAGGAGATAGGACCTCTCAAG 670 Query 77173 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 ||||| |||||||| || | || |||||| | || ||||| || Sbjct 669 GGTTTTGAAACCAAAGTAATCATAGTCAAAGTCCCGGTCATAAATGAT 622 >seq242768 Length=840 Score = 100 bits (110), Expect = 4e-16 Identities = 118/158 (75%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 76492 CTCTCTTTCATATTG--TGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAA 76549 ||| |||||||| || |||| | | || ||||||| | |||||| |||| ||||| Sbjct 174 CTCCCTTTCATACTGGGTGTACAGATCCA--CAAATTCTTGACCCCAACAATCAGCCAAA 117 Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609 || ||| |||||| || || | || ||||| | |||| || ||| | || |||| Sbjct 116 CCTGGAGCTTCATTAGGGCAAAACAGGGACCAATGCCCATTACTCTGAACTCTTTCCATA 57 Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 76647 ||||||||||||| ||| |||||| |||||||||||| Sbjct 56 AAGAGATCAGGTACCCAAAGAGCATAAAATAGATCTCG 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 706196055960000