Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq689433 138 8e-28 seq750760 134 1e-26 seq726932 134 1e-26 seq313781 134 1e-26 seq109077 134 1e-26 seq702768 129 4e-25 seq620935 113 3e-20 seq736048 104 2e-17 seq662336 98.7 7e-16 >seq689433 Length=414 Score = 138 bits (152), Expect = 8e-28 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| |||||| || ||||||||||| || ||| || | || ||| Sbjct 230 ACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGTGTCCGACCATCCTCC 171 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | ||||||||| || ||||||| | ||||||||||| ||| | || ||||| ||| Sbjct 170 AACTGCTTCCCTGCGAAGATCAGCCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCCTGA 111 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || || ||||| | ||||||| || | | |||||||| | || ||||||||| Sbjct 110 ATTTTGGCCTTCACATTATCTATGGTATCTGAGCTCTCCACCTCTAGTGTGATCGTCTTT 51 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||||||||| || || ||||| Sbjct 50 CCCGTCAGGGTCTTCACAAATATCTGCAT 22 >seq750760 Length=1299 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||| || | | ||||| ||| || || |||||| ||||||||||| || || Sbjct 361 CCACCTCTGAGGCGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCT 302 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || || |||| || |||||||||||||| || || | || ||||| || | ||| Sbjct 301 AGGGTCCGGCCGTCCTCGAGCTGCTTCCCGGCGAATATGAGGCGTTGCTGGTCCGGAGGA 242 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | |||||||| ||| ||||| ||||| | | |||||||| | ||| |||||| Sbjct 241 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCAGAGGACTCCACC 182 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | || || ||||| ||||| ||||| ||||||||||| ||||| Sbjct 181 TCAAGGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 135 >seq726932 Length=530 Score = 134 bits (148), Expect = 1e-26 Identities = 158/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| || || |||||| ||||||||||| ||||| || || |||| || Sbjct 40 CACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTC 99 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||| || || || ||||| | ||||||||| || | || | |||||||| ||| Sbjct 100 CAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTG 159 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | |||||||| | ||||| ||||| | || || ||| Sbjct 160 GATCTTAGCCTTGACATTGT--CGATGGTGTCAGACGATTCAACCTCTAGGGTTATGGTC 217 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| ||||||||||| ||||| Sbjct 218 TTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 249 >seq313781 Length=385 Score = 134 bits (148), Expect = 1e-26 Identities = 147/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||||||||| || || || | | | || ||||||||||||||||| || Sbjct 385 CTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCATCTTCCAGCTGCTTCCCGGCGAA 326 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||| | ||||||||| | || | || ||||| ||| ||||| ||||| | | Sbjct 325 GATCAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCCTGAATCTT-TGCTTTGACAT 267 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | |||||||||| |||||||||| ||| || |||||||| || || ||||||| Sbjct 266 TATCAATGGTGTCGGAACTCTCCACCTCCAGCGTGATGGTCTTTCCAGTCAGTGTCTTCA 207 Query 44325 CGAAGATTTGCAT 44337 ||||||||||||| Sbjct 206 CGAAGATTTGCAT 194 Score = 98.7 bits (108), Expect = 7e-16 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | | ||||| ||| || || |||||| || |||||||| Sbjct 199 TTGCATACCACCGCGCAGACGAAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTA 140 Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 ||| || ||||| ||| | || || |||||||| ||||| || |||| | |||||| Sbjct 139 ATCAGCAAGAGTT--CGCCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGTCTCTGCTGG 82 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGC 44280 |||| || | |||||||| ||| |||||| |||| | ||| | |||||||||| Sbjct 81 TCTGGTGGAATCCCTTCCTTGTCCTGAATCTTC-GCTTTCACGTTGTCAATGGTGTCGGA 23 Query 44281 GGATTCCACCTCCA 44294 | ||| ||||||| Sbjct 22 GCTTTCGACCTCCA 9 >seq109077 Length=726 Score = 134 bits (148), Expect = 1e-26 Identities = 147/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||||||||| || || || | | | || |||||||||||||| || || Sbjct 1 CTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCATCTTCCAGCTGCTTCCCAGCGAA 60 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC-TTCAATG 44264 |||||| | ||||||||| | || | |||||||| ||| ||||| ||| |||| Sbjct 61 GATCAATCTCTGCTGATCCGGTGGGATCCCTTCCTTGTCCTGAATCTT-TGCTTTCACAT 119 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | |||||||||| |||||||||| ||| || ||||| || || || ||||||| Sbjct 120 TATCAATGGTGTCGGAACTCTCCACCTCCAGCGTGATGGTCTTCCCAGTCAGAGTCTTCA 179 Query 44325 CGAAGATTTGCAT 44337 ||||||||||||| Sbjct 180 CGAAGATTTGCAT 192 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || ||| || || ||||||||||| ||||| || |||| ||| Sbjct 440 ACCAAGTGAAGTGTTGACTCTTTCTGAATGTTGTAATCCGCGAGAGTTCGGCCGTCTTCC 499 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||||||||| || || |||| | |||||| || | || | || ||||| ||| Sbjct 500 AGCTGCTTCCCTGCGAAAATCAGCCTCTGCTGGTCCGGTGGAATGCCCTCCTTATCCTGG 559 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| | ||| | |||||||||| | ||| ||||| | ||||| ||||| Sbjct 560 ATCTT-AGCTTTCACGTTGTCAATGGTGTCGGAGCTTTCGACCTCTAGAGTAATTGTCTT 618 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || || || || || || ||||| Sbjct 619 TCCGGTCAGAGTTTTAACAAAAATCTGCAT 648 Score = 104 bits (114), Expect = 2e-17 Identities = 170/240 (71%), Gaps = 10/240 (4%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | | ||||| ||| || || ||| || || |||||||| Sbjct 187 TTGCATACCACCACGCAGACGAAGCACCAAGTGGAGGGTAGACTCTTTCTGAATGTTGTA 246 Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 ||| || ||||| ||| | || || |||||||| || || || ||||| | |||||| Sbjct 247 ATCAGCAAGAGTT--CGCCCATCCTCAAGCTGCTTGCCCGCGAAAATCAACCTCTGCTGG 304 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT---CAATGTTCCTATGGTGTCG 44278 || | || | || ||||| ||| |||||| |||| || ||| | ||||| || Sbjct 305 TCCGGTGGAATCCCCTCCTTGTCCTGAATCTTC-GCTTTCACATTGT--CGATGGTATCC 361 Query 44279 GCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | | || ||||| | ||||| ||||| || || | |||||||||||||| |||||| Sbjct 362 GAGCTCTCAACCTCTAAGGTAATTGTCTTGCCAGTTAAAGTCTTCACGAAGATCTGCATG 421 >seq702768 Length=508 Score = 129 bits (142), Expect = 4e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || |||||| || ||||||||||| || || || | || ||| Sbjct 309 ACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTCCGACCATCCTCC 250 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | ||||||||| |||||||| | | ||||||||||| ||| | |||||||| ||| Sbjct 249 AACTGCTTCCCTGCAAAGATGAGCCTCTGCTGATCTGGAGGGATCCCTTCCTTGTCCTGA 190 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || || ||||| | |||| ||||| | | || ||||| | ||||| |||||| Sbjct 189 ATTTTTGCCTTCACATTATCTATAGTGTCTGAGCTCTCAACCTCTAGTGTAATTGTCTTT 130 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||||||||| || || ||||| Sbjct 129 CCCGTCAGGGTCTTCACAAATATCTGCAT 101 >seq620935 Length=1758 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| || || |||||| ||||| ||||| ||||| || || |||| || Sbjct 40 CACCAGGTGGAGGGTTGACTCCTTCTGGATATTGTAGTCGGCTAGGGTTCGGCCGTCCTC 99 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||| || || || ||||| | |||||||| || | || | |||||||| || Sbjct 100 CAGCTGTTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTG 159 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | || ||||| | ||||| ||||| | || || ||||| Sbjct 160 GATCTTGGCCTTGACATTATCGATCGTGTCAGATGATTCAACCTCTAGGGTTATGGTCTT 219 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| |||||||||||||| || ||||| Sbjct 220 CCCCGTTAGGGTCTTCACGAAAATCTGCAT 249 >seq736048 Length=1016 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| ||| || |||||||| ||||| || | | || | || || Sbjct 655 ACCAAGTGAAGGGTGGACTCTTTCTGGATGTTATAATCAGCCAATGTCCGGCCATCCTCG 714 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || ||||| || | | |||||| |||| || | ||| ||||| ||| Sbjct 715 AGCTGCTTACCAGCAAATATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGG 774 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 || || ||||| | || | |||||||| | | || || || | || || || || Sbjct 775 ATTTT-TGCTTTGACATTATCAATGGTGTCTGAGCTCTCAACTTCAAGGGTGATAGTTTT 833 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| |||||||||||||| || ||||||||| Sbjct 834 TCCAGTGAGGGTCTTCACAAAAATTTGCATG 864 Score = 102 bits (112), Expect = 6e-17 Identities = 166/238 (70%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || ||||||| | | |||| |||||| || ||||| |||||||| Sbjct 399 TATTTGCATGCCACCTCTCAAACGGAGAACCAAGTGAAGGGTAGATTCCTTCTGGATGTT 458 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| || || | | || | || |||||||| || || ||||| || | | |||||| Sbjct 459 GTAGTCCGCCAATGTCCGACCATCTTCCAGCTGTTTACCAGCAAATATGAGCCTCTGCTG 518 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 |||| || | ||| ||||| ||| || || |||| | | |||||||| | Sbjct 519 GTCTGGGGGAATACCCTCCTTGTCCTGGATTTTAGCTTTCACATTATCGATGGTGTCTGA 578 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || | ||||| || ||||| |||||||||||||| || ||||||||| Sbjct 579 ACTCTCAACTTCAAGGGTAATAGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCATG 636 Score = 96.9 bits (106), Expect = 2e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||||||| | | |||| |||||| ||| |||||| |||||||| || Sbjct 858 TTGCATGCCACCTCTCAGACGGAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATA 917 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| || | | || | || ||||||||||| || |||||||| | | |||||| || Sbjct 918 ATCAGCCAATGTCCGGCCATCCTCCAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTC 977 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCA 44261 || ||| | ||| ||||| ||| ||||| ||||| Sbjct 978 TGGAGGAATACCCTCCTTGTCCTGGATCTTTGCCTTCA 1015 Score = 86.0 bits (94), Expect = 4e-12 Identities = 151/215 (70%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGA--GTTGGCGCTCGTCGT 44186 || |||||||| || ||||| || || ||||| || || | ||| || | || | Sbjct 199 ACAAGGTGAAGGGTTGATTCCTTCTGTATATTGTAGTCAGCCAAAGTT--CGACCATCTT 256 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | |||||||| || |||||||| | | |||||| || | || | ||||||||| ||| Sbjct 257 CTAGCTGCTTACCAGCAAAGATTAGCCTCTGCTGGTCGGGTGGAATACCTTCCTTGTCCT 316 Query 44247 TTATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303 || || ||||| || ||| | |||||||| | || ||||| | || || | Sbjct 317 GGATTTT-TGCTTTCACATTGT--CGATGGTGTCTGAACTCTCAACCTCAAGGGTGATAG 373 Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || || || ||||||||||| || ||||||||| Sbjct 374 TTTTACCAGTAAGGGTCTTCACAAATATTTGCATG 408 >seq662336 Length=3756 Score = 98.7 bits (108), Expect = 7e-16 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168 |||| || || || ||||| || |||||||| ||| ||| ||||||||||| ||||| | Sbjct 301 TTCCTCCCCTAAGCCTCAAAACAAGGTGAAGTGTGGACTCTTTTTGGATGTTATAATCTG 242 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | || ||| | || ||||| || || || ||||| ||||| | ||||||||| | || Sbjct 241 CAAGAGTGCGACCATCTTCCAGTTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAG 182 Query 44229 GCACACCTTCCTTTTCC 44245 | | |||||||| ||| Sbjct 181 GAATGCCTTCCTTGTCC 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356672990029125