Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1 _202015-09-10] 210,444 sequences; 539,624,286 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq203223 82.4 8e-11 >seq203223 Length=1923 Score = 82.4 bits (90), Expect = 8e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261 |||||||||||||| |||| || ||||||| ||| | || || || |||||||| Sbjct 324 CACGCGAAGTCGCAGTGTAAGCCCTCGTCTCGCGAGATTAACTCATTCGAGAAAGTTAAT 265 Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAAGAA 16320 || ||||| || |||||||||| ||||||||||| |||| || || || ||||| Sbjct 264 CCCGGCATGAGACCGCGTTTCTTTAGCCAGAATATCG-AGCAGAAGCTTCCGGAGAAGAA 206 Query 16321 TATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGC 16359 || || || || | || || |||| | ||||| || Sbjct 205 GATGCCTTCCACGCAGGCGAATGCGAGCAGGCGTTCGGC 167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510069098850080