Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1 _202015-09-10] 210,444 sequences; 539,624,286 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq73220 132 4e-26 seq76175 123 2e-23 seq2835 123 2e-23 seq207794 118 9e-22 seq142724 118 9e-22 seq44755 114 1e-20 seq121659 113 4e-20 seq9834 113 4e-20 seq127437 109 5e-19 seq45179 109 5e-19 seq56209 105 6e-18 seq138849 100 2e-16 seq83787 98.7 8e-16 >seq73220 Length=12354 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| ||| | ||| |||| || | ||||||||||| || |||||||| || ||| Sbjct 7601 CCACCTCTCAGACGGAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAATCAGCC 7660 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || || | ||||||||||| || || ||| | ||||| ||||||||||| || Sbjct 7661 AATGTCCGGCCATCCTCCAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGAGGA 7720 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||||| ||||| | | | | ||||| ||| | Sbjct 7721 ATACCCTCCTTGTCCTGGATCTTTGCCTTCACATTGTCAATTGTATCTGAACTCTCAACT 7780 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | || |||||||| || |||| |||||||||||||||||||||| Sbjct 7781 TCAAGTGTGATGGTCTTTCCAGTTAGCGTTTTGACAAATATTTGCATT 7828 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || | ||| |||| || | || |||||||| || ||||| ||||||||| Sbjct 7145 CCACCTCTCAAACGGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGCC 7204 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | || ||||||||||| |||||| | || || ||||||||||| ||| Sbjct 7205 AATGTCCGACCATCTTCCAGCTGTTTACCCGCAAATATGAGCCTCTGCTGGTCTGGGGGA 7264 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||| || |||||| | ||| || || ||| | Sbjct 7265 ATACCCTCCTTGTCCTGGATTTTAGCTTTCACATTATCGATGGTGTCTGAACTCTCAACT 7324 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | |||||| || || || || | || || ||||| |||||||| Sbjct 7325 TCAAGGGTAATAGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCAT 7371 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||| ||||| | ||| || | || | || || ||||| || || || ||||| ||| Sbjct 6917 CCCCCACGCAGGCGGAGAACAAGGTGAAGGGTTGATTCCTTCTGTATATTGTAGTCAGCC 6976 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | || || ||||| || || ||| | || || |||||||||||| || Sbjct 6977 AAAGTTCGACCATCTTCTAGCTGCTTACCAGCAAAGATTAGCCTCTGCTGGTCCGGTGGA 7036 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| || ||| |||||| | | ||| ||| || ||| | Sbjct 7037 ATACCTTCCTTGTCCTGGAGTTTTGCTTTCACATTGTCGATAGTGTCTGAACTCTCAACT 7096 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || || || || || | || || |||||||||||||| Sbjct 7097 TCAAGGGTGATAGTTTTACCAGTAAGGGTCTTCACAAATATTTGCAT 7143 >seq76175 Length=8586 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| || | || |||||||| || ||||| ||||| || Sbjct 2483 CCACCACGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCT 2424 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| || |||||||||||||||| || || | ||||| | |||||||||| || Sbjct 2423 AGGGTTCGGCCGTCCTCCAGCTGTTTTCCAGCGAAGATAAGACGCTGCTGGTCCGGTGGG 2364 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | ||| || ||| | || Sbjct 2363 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCAGACGATTCAACC 2304 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | ||| |||||||| || |||| ||||| || || || ||||| ||| Sbjct 2303 TCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTG 2253 >seq2835 Length=4848 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| || | || |||||||| || ||||| ||||| || Sbjct 810 CCACCACGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCT 751 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| || |||||||||||||||| || || | || || | |||||||||| || Sbjct 750 AGGGTTCGGCCGTCCTCCAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGG 691 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | ||| || ||| | || Sbjct 690 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCAGATGATTCAACC 631 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | ||| |||||||| || |||| ||||| ||||| || ||||| ||| Sbjct 630 TCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATCTTG 580 >seq207794 Length=1432 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | || |||| || | ||||| |||||||||||||| || || | Sbjct 887 TTCCTCCACGAAGGCGAAGAACCAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAATCAG 946 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 |||| || | ||||| |||||||| || ||| | || || |||||||| || || Sbjct 947 CCAGAGTCCTTCCATCCTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCGGGGG 1006 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || |||||||| ||||||| ||||| | | ||| || ||| | |||| Sbjct 1007 GGATACCCTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATTGTGTCAGAGCTCTCCA 1066 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||| | || |||||||| ||||| | || || ||||||||||||||| Sbjct 1067 CTTCAAGAGTGATGGTCTTTCCGGTCAGTGTCTTCACAAATATTTGCATT 1116 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| |||| ||| | || || | || | ||||||||||| ||||||||||| || | Sbjct 1115 TTCCACCTCTCAGGCGAAGAACAAGGTGGAGTGTGGACTCCTTCTGAATGTTATAATCTG 1174 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| || | | ||||| ||||| || || ||| |||| | || |||||||| || Sbjct 1175 CCAAAGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGG 1234 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||||||||| ||| ||| || || | | ||| |||||| | ||| Sbjct 1235 GGATTCCTTCCTTGTCTTGGATTTTTGCCTTTACATTGTCGATTGTATCAGAGCTTTCCA 1294 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | || |||||||| || |||| || || ||||||||||||||| Sbjct 1295 CCTCAAGCGTGATGGTCTTTCCAGTTAGTGTCTTTACAAATATTTGCATT 1344 >seq142724 Length=6502 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || | |||||||| || | || |||||||| || ||||| ||||| || Sbjct 3492 CCACCTCTGAGGCGGAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCT 3551 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| || || || | || || | ||||||||| || Sbjct 3552 AGGGTCCGGCCGTCCTCGAGCTGCTTCCCGGCGAATATGAGGCGTTGCTGGTCCGGAGGA 3611 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| ||||| | | ||| || ||| || |||| Sbjct 3612 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCAGAGGACTCCACC 3671 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| |||||||| || |||| ||||| || || || ||||| || Sbjct 3672 TCAAGGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 3721 >seq44755 Length=3421 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| |||| ||||||||||| ||||||||||| || |||| ||| | | ||| Sbjct 2528 AGGACCAGGTGCAGTGTGGACTCCTTCTGAATGTTATAATCTGCCAACGTTCTGCCATCC 2587 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| || || ||| |||| | || |||||||| ||| | ||||||||||| Sbjct 2588 TCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCAGGGGGGATTCCTTCCTTGTCT 2647 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||| || || || | | | || ||||| | ||| ||| | ||| |||||| Sbjct 2648 TGGATTTTCGCCTTTACATTGTCAACTGTATCGGAGCTCTCAACTTCAAGGGTGATGGTC 2707 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || ||||| | || || ||||||||||||||| Sbjct 2708 TTTCCGGTGAGTGTCTTAACAAATATTTGCATT 2740 Score = 111 bits (122), Expect = 1e-19 Identities = 144/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 |||||| |||||||||||||| || || ||||| || | ||||| |||||||| || Sbjct 2086 AGTGGATTCCTTTTGAATGTTGTAATCAGCCAGAGTCCTTCCATCCTCAAGCTGTTTACC 2145 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 ||| | || || |||||||| || ||| | || |||||||| ||||||| || Sbjct 2146 AGCAAAGATGAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTCTTGGATCTTTGCCTT 2205 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 ||| | | ||| || ||| | |||| ||| | || |||||||| || || | || Sbjct 2206 CACATTGTCGATTGTGTCAGAGCTCTCCACTTCAAGAGTGATGGTCTTTCCAGTCAGTGT 2265 Query 21158 TTTGACAAATATTTGCATT 21176 || ||||||||||||||| Sbjct 2266 CTTCACAAATATTTGCATT 2284 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| |||| ||| | || || | || | ||||||||||| ||||||||||| || | Sbjct 2283 TTCCACCTCTCAGGCGAAGAACAAGGTGGAGTGTGGACTCCTTCTGAATGTTATAATCTG 2342 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| || | | ||||| ||||| || || ||| |||| | || |||||||| || Sbjct 2343 CCAAAGTCCTGCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTTTGCTGGTCTGGGG 2402 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||||||||| ||| || || || | | ||| |||||| | ||| Sbjct 2403 GGATTCCTTCCTTGTCTTGGATTTTCGCCTTTACATTGTCGATTGTATCAGAGCTTTCCA 2462 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | || |||||||| || || | || || ||||||||||||||| Sbjct 2463 CCTCAAGTGTGATGGTCTTTCCAGTCAGTGTCTTTACAAATATTTGCATT 2512 >seq121659 Length=2328 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| |||| ||| ||||| ||||||||||| ||||| || Sbjct 91 CCTCCACGAAGACGGAGCACCAAGTGCAGAGTTGACTCTTTTTGAATGTTGTAGTCGGCG 150 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| || | || |||||||| || || || | || || ||||||||||| || Sbjct 151 AGGGTTCGGCCATCTTCCAGCTGCTTACCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGA 210 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| ||||| || |||||| ||||| | | | | || || | || Sbjct 211 ATGCCCTCCTTATCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTTTCGACC 270 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| |||||||| ||||| | ||||| ||||| || ||||| Sbjct 271 TCCAGGGTGATGGTCTTCCCGGTAAGGGTTTTCACAAAAATCTGCAT 317 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | ||| ||||| || || ||||| || || || Sbjct 319 CCTCCACGAAGACGGAGGACCAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCGGCA 378 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| | | || || ||||| ||||| ||| | || || |||||||||||| || Sbjct 379 AGGGTTCGCCCATCTTCGAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGA 438 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||| || | | ||| || || | || | Sbjct 439 ATACCCTCCTTGTCCTGGATCTTGGCTTTAACGTTGTCGATCGTGTCGGAGCTTTCGACT 498 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||||||||| || || | || || |||||||| ||||| Sbjct 499 TCCAAAGTAATGGTCTTTCCTGTAAGAGTCTTCACAAATATCTGCAT 545 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | ||||| ||||||||||| || ||||| ||||| ||||| ||| | |||| Sbjct 562 AGCACTAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGTGTTCGACCGTCT 621 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| || || || | || || |||||||| ||| || | ||| || ||||| Sbjct 622 TCAAGCTGCTTCCCGGCGAATATCAGCCTCTGCTGATCCGGTGGGATGCCCTCTTTGTCT 681 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | ||| || || | ||| || | ||| || ||| Sbjct 682 TGGATCTTGGCCTTGACATTATCGATCGTGTCCGAGCTCTCAACCTCTAGGGTTATTGTC 741 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || ||||| | ||||||||||| || ||||| Sbjct 742 TTTCCGGTAAGGGTTTTGACAAAGATCTGCAT 773 >seq9834 Length=2319 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| || | ||||||||||| |||||||| || || || Sbjct 281 CCACCGCGCAGACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGCA 222 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| | | ||||| ||||| ||||| || |||| |||||||||||||| || Sbjct 221 AGAGTTCGCCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGTCTCTGCTGGTCTGGTGGA 162 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||| |||||| | | | | || || | || Sbjct 161 ATCCCTTCCTTGTCCTGAATCTTCGCTTTCACGTTGTCAATGGTGTCGGAGCTTTCGACC 102 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| |||||||| ||||| | ||||| ||||| || ||||| Sbjct 101 TCCAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAAATCTGCAT 55 >seq127437 Length=6100 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| |||||||| ||||| || || |||||||| | ||||| |||||||| || Sbjct 2044 GTGGATTCCTTTTGTATGTTGTAATCAGCCAGGGTCCTTCCATCCTCAAGCTGTTTACCA 2103 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || |||||||| || ||| | || |||||||| |||||| ||| Sbjct 2104 GCAAAGATGAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTCTTGGATCTTCGCCTTC 2163 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || ||| | |||| || | || |||||||| ||||| | ||| Sbjct 2164 ACATTGTCGATTGTGTCAGAGCTCTCCACCTCAAGAGTGATGGTCTTCCCGGTCAGCGTC 2223 Query 21159 TTGACAAATATTTGCATT 21176 || ||||||||||||||| Sbjct 2224 TTTACAAATATTTGCATT 2241 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| |||| ||||| ||| |||| ||| | |||||||| || |||||||| || || | Sbjct 2240 TTCCACCTCTCAGCCGGAGAACCAAATGAAGGGTGGACTCTTTCTGAATGTTGTAATCTG 2299 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| ||| | | ||||| |||||||| || ||| | || || ||||||||||| || Sbjct 2300 CCAAGGTCCGACCATCCTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGGG 2359 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || |||||||| ||| ||| || || | | | | || ||| ||| Sbjct 2360 GGATTCCCTCCTTGTCTTGGATTTTTGCCTTTACATTGTCAATCGTGTCAGAACTCTCTA 2419 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||| | ||| ||||| || || || | || || ||||| ||||||||| Sbjct 2420 CTTCAAGGGTGATGGTTTTTCCAGTGAGTGTCTTAACAAAGATTTGCATT 2469 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| |||| || | ||| |||| || | |||||||| || ||||||||||| || | Sbjct 2468 TTCCACCTCTCAAACGGAGGACCAGGTGGAGTGTGGACTCTTTCTGAATGTTATAATCGG 2527 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| || | | ||||| ||||| || || ||| |||| | || ||||| || || Sbjct 2528 CCAAAGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGATCAGGGG 2587 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||||||||| ||| || || || | | | | |||||| | ||| Sbjct 2588 GGATTCCTTCCTTGTCTTGGATTTTCGCCTTTACATTGTCAATCGTATCAGAGCTCTCAA 2647 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||| | ||| |||||||| || || | || || ||||||||||||||| Sbjct 2648 CTTCAAGGGTGATGGTCTTTCCAGTGAGTGTCTTAACAAATATTTGCATT 2697 >seq45179 Length=1454 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| || | || ||||| || |||||||| || ||||| Sbjct 330 CCACCACGCAGACGAAGCACCAAGTGGAGGGTTGACTCTTTCTGAATGTTGTAATCCGCG 389 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| || |||| |||||||| || || || |||| || |||||||||||| || Sbjct 390 AGAGTTCGGCCGTCTTCCAGCTGCTTACCTGCGAAAATCAGCCTCTGCTGGTCCGGTGGA 449 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| ||||| || |||||| |||||| | | ||| || || | || Sbjct 450 ATGCCCTCCTTATCCTGGATCTTAGCTTTCACGTTGTCGATGGTGTCGGAGCTTTCGACC 509 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||||| ||||| ||||| | ||||| ||||| || |||||| Sbjct 510 TCTAGAGTAATTGTCTTTCCGGTCAGAGTTTTAACAAAAATCTGCATT 557 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | |||||||| |||| ||| ||||| || || || || ||||| | Sbjct 556 TTCCTCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCTTTCTGGATATTGTAGTCAG 615 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | |||||| || | || || ||||| || || || | || || |||||||||||| | Sbjct 616 CGAGGGTTCGGCCATCTTCAAGCTGCTTACCGGCGAAGATCAGCCTCTGCTGGTCCGGTG 675 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||| |||||||| |||||| ||||| | | | | || || | || Sbjct 676 GAATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTTTCGA 735 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| |||||||| ||||| | ||||| ||||| || ||||| Sbjct 736 CCTCCAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAAATCTGCAT 784 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | ||||| ||||||||||| || ||||| ||||| ||||| ||| | |||| Sbjct 1029 AGCACTAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGTGTTCGACCGTCT 1088 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || |||||||| || || | || || |||||||| ||| || | ||| || ||||| Sbjct 1089 TCAAGCTGTTTCCCGGCGAATATCAGCCTCTGCTGATCCGGTGGGATGCCCTCTTTGTCT 1148 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | ||| || || | ||| || | ||| |||||| Sbjct 1149 TGGATCTTGGCCTTGACATTATCGATCGTGTCGGAGCTCTCAACCTCTAGGGTTATGGTC 1208 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || ||||| | ||||| ||||| || ||||| Sbjct 1209 TTTCCGGTAAGAGTTTTAACAAAGATCTGCAT 1240 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | ||| ||||| || || || || || || || Sbjct 786 CCTCCACGGAGACGGAGGACCAAGTGAAGAGTTGACTCTTTCTGGATATTGTAATCGGCA 845 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| | | || || ||||| || || ||| | || || |||||||||||| || Sbjct 846 AGGGTTCGCCCATCTTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGA 905 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||| || | | ||| || || | || | Sbjct 906 ATACCCTCCTTGTCCTGGATCTTGGCTTTAACATTGTCGATGGTGTCGGAGCTTTCGACT 965 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||||||||| || || | || || |||||||| ||||| Sbjct 966 TCCAAAGTAATGGTCTTTCCTGTAAGAGTCTTCACAAATATCTGCAT 1012 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | ||||||||||| || ||||| ||||||||| Sbjct 102 CCACCACGGAGGCGGAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCC 161 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | || |||||||| || || || | || | |||||||| ||| || Sbjct 162 AGGGTCCTCCCATCTTCCAGCTGCTTCCCAGCGAAGATCAACCTCTGCTGATCCGGTGGG 221 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| |||||| | | | || || |||| Sbjct 222 ATCCCTTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATGGTGTCGGAACTCTCCACC 281 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || |||||||| || || | || || || || |||||||| Sbjct 282 TCCAGCGTGATGGTCTTCCCAGTCAGAGTCTTCACGAAGATTTGCAT 328 >seq56209 Length=7549 Score = 105 bits (116), Expect = 6e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| || | || |||||||| || || || ||||| || Sbjct 2974 CCACCACGGAGGCGGAGCACCAGGTGGAGGGTTGACTCCTTCTGGATATTGTAGTCGGCT 2915 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| || ||||||||||||||||||| || | || || | |||||||||| || Sbjct 2914 AGGGTTCGGCCGTCCTCCAGCTGTTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 2855 Query 21069 ACGCCTTCCTTGTCGGCGATCTT 21091 | |||||||||||| |||||| Sbjct 2854 ATGCCTTCCTTGTCTTGGATCTT 2832 >seq138849 Length=4585 Score = 100 bits (110), Expect = 2e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| || | || |||||||| || || || ||||| || |||||| || ||||| Sbjct 1442 AGCACCAGGTGGAGGGTTGACTCCTTCTGGATATTGTAGTCGGCTAGGGTTCGGCCGTCC 1383 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||||||||| || | || || | |||||||||| || | |||||||||||| Sbjct 1382 TCCAGCTGTTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCT 1323 Query 21084 GCGATCTT 21091 |||||| Sbjct 1322 TGGATCTT 1315 >seq83787 Length=2295 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | ||| ||||| || || || || || || || Sbjct 2134 CCTCCACGAAGACGGAGGACCAGGTGAAGAGTTGACTCTTTCTGGATATTGTAATCGGCA 2075 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| | | || || ||||| ||||| ||| | || || |||||||||||| || Sbjct 2074 AGGGTTCGCCCATCTTCGAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGA 2015 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||| || | | ||| || || | || | Sbjct 2014 ATACCCTCCTTGTCCTGGATCTTGGCTTTAACGTTGTCGATCGTGTCGGAGCTTTCGACT 1955 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||||||||| || || | ||||| |||||||| ||||| Sbjct 1954 TCCAAAGTAATGGTCTTTCCTGTAAGAGTTTTCACAAATATCTGCAT 1908 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | ||||| ||||||||||| || ||||| ||||| ||||| ||| | |||| Sbjct 1891 AGCACTAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTTCGACCGTCT 1832 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| || || || | || || |||||||| ||| || | ||| || ||||| Sbjct 1831 TCAAGCTGCTTCCCGGCGAATATCAGCCTCTGCTGATCCGGTGGGATGCCCTCTTTGTCT 1772 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | ||| || || | ||| || | ||| || ||| Sbjct 1771 TGGATCTTGGCCTTGACATTATCGATCGTGTCCGAGCTCTCAACCTCTAGGGTTATTGTC 1712 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || ||||| | ||||| ||||| || ||||| Sbjct 1711 TTTCCGGTAAGGGTTTTCACAAAGATCTGCAT 1680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421176195409904