Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1 _202015-09-10] 210,444 sequences; 539,624,286 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq173968 152 5e-32 seq76175 143 3e-29 seq2835 143 3e-29 seq203223 134 1e-26 seq138849 134 1e-26 seq56209 134 1e-26 seq142724 131 2e-25 seq82795 131 2e-25 seq45179 118 1e-21 seq9834 116 4e-21 seq121659 113 5e-20 seq127437 109 6e-19 seq83787 104 2e-17 seq44755 100 3e-16 seq73220 96.9 4e-15 seq207794 82.4 8e-11 >seq173968 Length=7941 Score = 152 bits (168), Expect = 5e-32 Identities = 204/284 (72%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 116603 CGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAG 116662 |||||| || ||||| || || ||||| || | ||| |||||||| ||||||||| Sbjct 7658 CGGTTCTGTATGTTCCCGATTCAGTACCCTGAAGTCTGGGAAATGTACAAGAAGGCCGAG 7717 Query 116663 GCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGC 116722 |||||||| ||||||| |||||| || ||||| || ||||| | | | ||||| | Sbjct 7718 GCGTCGTTTTGGACCGCCGAGGAAGTCGACCTCTCTCAGGACCAGCGTCAATGGGAAAAC 7777 Query 116723 TTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGAC 116782 | | | | ||||| || ||||||| || | || ||||| |||||||| ||| Sbjct 7778 CTCACCAGCGACGAGAAGCACTTCATCAGTCATATCCTTGCCTTCTTCGCCGCTTCTGAC 7837 Query 116783 GGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCG 116842 || |||||| ||| || || | || | ||| ||||||| ||||| |||||||| Sbjct 7838 GGAATCGTCCTCGAAAACCTCGCCGGAAGGTTCATGAAGGAGGTCCAGGTCGCCGAGGCT 7897 Query 116843 CGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTC 116886 || |||||| || |||||||| ||||| || ||| | ||||| Sbjct 7898 CGTGCCTTCTATGGATTTCAGATTGCCATTGAAAACATCCACTC 7941 >seq76175 Length=8586 Score = 143 bits (158), Expect = 3e-29 Identities = 171/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| ||||| || ||||| || ||||| ||| | || || ||| | Sbjct 2254 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTTGAATCG 2313 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | |||||| || || | ||||| || |||||||| ||||| Sbjct 2314 TCTGACACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCACCGGAC 2373 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || || |||| ||| || ||||||||||| |||| || ||||| ||||||| Sbjct 2374 CAGCAGCGTCTTATCTTCGCTGGAAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTAC 2433 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918 ||||||||||||||| | || || || || ||| | ||| | | || |||| Sbjct 2434 AACATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCGCCTCCGTGGTGGCG 2485 >seq2835 Length=4848 Score = 143 bits (158), Expect = 3e-29 Identities = 171/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || || ||||| || ||||| || ||||| ||| | || || ||| | Sbjct 581 AAGATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTTGAATCA 640 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | |||||| || || | ||||| || |||||||| ||||| Sbjct 641 TCTGACACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCACCGGAC 700 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || ||||||| ||| || ||||||||||| |||| || ||||| ||||||| Sbjct 701 CAGCAGCGTCTCATCTTCGCTGGAAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTAC 760 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918 ||||||||||||||| | || || || || ||| | ||| | | || |||| Sbjct 761 AACATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCGCCTCCGTGGTGGCG 812 >seq203223 Length=1923 Score = 134 bits (148), Expect = 1e-26 Identities = 284/415 (68%), Gaps = 9/415 (2%) Strand=Plus/Plus Query 116952 ACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCG 117011 |||| ||||| || || || || || |||| ||| ||||||| || || ||||||| Sbjct 90 ACGCAATCGATACCATCCCCTGTGTGGCGAAGAAAGCCCAGTGGGCTCTCCGATGGATCG 149 Query 117012 CCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCT 117071 |||| || || || | ||| |||||| | || ||||| ||| || ||| ||| Sbjct 150 ACGGCTCCGAAACC---TTTGCCGAACGCCTGCTCGCATTCGCCTGCGTGGAAGGCATCT 206 Query 117072 TCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCC 117131 |||| || || || ||| | | ||||| ||||| ||||||||||| |||||||| || Sbjct 207 TCTTCTCCGGAAGCTTCTGCTCGATATTCTGGCTAAAGAAACGCGGTCTCATGCCGGGAT 266 Query 117132 TGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTT 117191 | |||||| || ||| | ||||| | |||||||| | || |||||||| || || | Sbjct 267 TAACTTTCTCGAATGAGTTAATCTCGCGAGACGAGGGCTTACACTGCGACTTCGCGTGCT 326 Query 117192 TGCTGTTCAAGC-ATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACC 117250 | || | || | | || | | | || |||| || | | || | || |||||| || Sbjct 327 TACTCTACAGCCTACTTAG-GAATAAACTAAGCGAGGAGAGAGTGAAGGCAATCGTCGCC 385 Query 117251 GACGCGGTCGCCATCGAGCAGCG-CTTCCTCACCGAAGCGCTGCCGGTGCG-TCTGCTGG 117308 ||| |||| | || || || | ||| || ||| ||| | || ||||| ||| ||| Sbjct 386 GACTCGGTGGATATAGA-AAGAGAGTTCGTCTGCGACGCGTTACC-GTGCGCTCTAGTGG 443 Query 117309 GACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCT 117363 | | || | | ||| ||||||||||| ||||| ||||| | ||||| Sbjct 444 GGATGAACAGTGCTCTAATGAGCCAATACATCGAATTCGTTGCCGATCGCCTGCT 498 >seq138849 Length=4585 Score = 134 bits (148), Expect = 1e-26 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || || ||||| || || || ||| | || || ||| | Sbjct 1228 AAGATGCAGATTTTCGTGAAGACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAATCA 1287 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | |||||| || || | ||||| || |||||||| ||||| Sbjct 1288 TCTGACACGATCGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCGGAC 1347 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || ||||||| ||| |||||||||||||| |||| || ||||| ||||||| Sbjct 1348 CAGCAGCGCCTCATCTTCGCTGGCAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTAC 1407 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918 || |||||||||||| | || || || || ||| | ||| | | || |||| Sbjct 1408 AATATCCAGAAGGAGTCAACCCTCCACCTGGTGCTTCGCCTCCGTGGTGGCG 1459 >seq56209 Length=7549 Score = 134 bits (148), Expect = 1e-26 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || || ||||| || || || ||| | || || ||| | Sbjct 2745 AAGATGCAGATTTTCGTGAAGACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAATCA 2804 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | |||||| || || | ||||| || |||||||| ||||| Sbjct 2805 TCTGACACGATCGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCGGAC 2864 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || ||||||| ||| |||||||||||||| |||| || ||||| ||||||| Sbjct 2865 CAGCAGCGCCTCATCTTCGCTGGCAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTAC 2924 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918 || |||||||||||| | || || || || ||| | ||| | | || |||| Sbjct 2925 AATATCCAGAAGGAGTCAACCCTCCACCTGGTGCTCCGCCTCCGTGGTGGCG 2976 >seq142724 Length=6502 Score = 131 bits (144), Expect = 2e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| ||||| || ||||| || ||||| ||| | || || || || Sbjct 3721 AAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATAACCCTTGAGGTGGAGTCC 3662 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | | |||| || || | ||||| || ||||| || ||||| Sbjct 3661 TCTGACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGAC 3602 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 |||||||| ||||| | ||| || || ||||| || |||| || ||||| |||||| Sbjct 3601 CAGCAACGCCTCATATTCGCCGGGAAGCAGCTCGAGGACGGCCGGACCCTAGCTGACTAC 3542 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918 ||||||||||||||| | || || || || ||| | ||| | || || |||| Sbjct 3541 AACATCCAGAAGGAGTCTACCCTCCACCTGGTGCTCCGCCTCAGAGGTGGCG 3490 >seq82795 Length=1924 Score = 131 bits (144), Expect = 2e-25 Identities = 283/415 (68%), Gaps = 9/415 (2%) Strand=Plus/Plus Query 116952 ACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCG 117011 |||| ||||| || || || || || |||| ||| ||||||| || || ||||||| Sbjct 90 ACGCAATCGATACCATCCCCTGTGTGGCGAAGAAAGCCCAGTGGGCTCTCCGATGGATCG 149 Query 117012 CCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCT 117071 |||| || || || | ||| |||||| | || ||||| ||| || ||| | | Sbjct 150 ACGGCTCCGAAACC---TTTGCCGAACGCCTGCTCGCATTCGCCTGCGTGGAAGGCATTT 206 Query 117072 TCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCC 117131 |||| || || || ||| | | ||||| ||||| ||||||||||| |||||||| || Sbjct 207 TCTTCTCCGGAAGCTTCTGCTCGATATTCTGGCTAAAGAAACGCGGTCTCATGCCGGGAT 266 Query 117132 TGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTT 117191 | |||||| || ||| | ||||| | |||||||| | || ||||| || || || | Sbjct 267 TAACTTTCTCAAATGAGTTAATCTCGCGAGACGAGGGCTTACACTGCGATTTCGCGTGCT 326 Query 117192 TGCTGTTCAAGC-ATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACC 117250 |||| | || | | || | | | || |||| || | | || | || |||||| || Sbjct 327 TGCTCTACAGCCTACTTAG-GAATAAACTAAGCGAGGAGAGAGTGAAGGCAATCGTCGCC 385 Query 117251 GACGCGGTCGCCATCGAGCAGCG-CTTCCTCACCGAAGCGCTGCCGGTGCG-TCTGCTGG 117308 ||| |||| | || || || | ||| || ||| ||| | || ||||| ||| ||| Sbjct 386 GACTCGGTGGATATAGA-AAGAGAGTTCGTCTGCGACGCGTTACC-GTGCGCTCTAGTGG 443 Query 117309 GACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCT 117363 | | || | | ||| ||||||||||| ||||| ||||| | ||||| Sbjct 444 GGATGAACAGTGCTCTAATGAGTCAATACATCGAATTCGTTGCCGATCGCCTGCT 498 >seq45179 Length=1454 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || || || || ||||| ||| | || || || | || Sbjct 1240 ATGCAGATCTTTGTTAAAACTCTTACCGGAAAGACCATAACCCTAGAGGTTGAGAGCTCC 1181 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||||||||||||||| |||| ||| Sbjct 1180 GACACGATCGATAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCACCGGATCAG 1121 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || || | ||| || |||||||| || |||| || || || |||||||||| Sbjct 1120 CAGAGGCTGATATTCGCCGGGAAACAGCTTGAAGACGGTCGAACACTGGCCGACTACAAC 1061 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||| |||| |||| ||||| Sbjct 1060 ATCCAGAAGGAGTCCACCTTGCACTTAGTG 1031 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || || || |||||||| | || || || || Sbjct 328 ATGCAAATCTTCGTGAAGACTCTGACTGGGAAGACCATCACGCTGGAGGTGGAGAGTTCC 269 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | || | ||| |||| ||||| || || ||||| |||| ||| Sbjct 268 GACACCATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAAGGGATCCCACCGGATCAG 209 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| ||| || || |||||||| || | | | ||||| ||||||||| Sbjct 208 CAGAGGTTGATCTTCGCTGGGAAGCAGCTGGAAGATGGGAGGACCCTGGCGGACTACAAC 149 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| |||| || ||||| || Sbjct 148 ATCCAGAAGGAGTCCACCCTCCATCTTGT 120 >seq9834 Length=2319 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || || || |||||||| | || || || || Sbjct 283 ATGCAAATCTTCGTGAAGACACTGACTGGAAAGACCATCACGCTGGAGGTGGAGAGTTCC 342 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| | ||| |||| ||||| ||||| ||||| |||| ||| Sbjct 343 GACACCATTGATAATGTCAAAGCAAAGATTCAGGACAAGGAGGGGATCCCACCGGATCAG 402 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| ||| || || |||||||| || | | | ||||| ||||||||| Sbjct 403 CAGAGGCTGATCTTCGCCGGGAAGCAGCTGGAAGATGGGAGGACCCTGGCGGACTACAAC 462 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || ||||| || Sbjct 463 ATCCAGAAGGAGTCGACCCTCCATCTTGT 491 >seq121659 Length=2328 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || || || || ||||||||| | || |||||| | || Sbjct 317 ATGCAGATTTTTGTGAAAACCCTTACCGGGAAGACCATCACCCTGGAGGTCGAAAGCTCC 258 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | || || |||||||| || | ||||| Sbjct 257 GACACCATTGACAACG-TGAAGGCTAAGATCCAGGATAAGGAGGGCATTCCACCAGACCA 199 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| ||| || || |||||||| || | || |||||| ||||||||| Sbjct 198 GCAGAGGCTGATCTTCGCTGGTAAGCAGCTGGAAGATGGCCGAACCCTCGCCGACTACAA 139 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||| || || ||| | || ||||| Sbjct 138 CATTCAAAAAGAGTCAACTCTGCA 115 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || || || || || || ||| | || || || | | Sbjct 773 ATGCAGATCTTTGTCAAAACCCTTACCGGAAAGACAATAACCCTAGAGGTTGAGAGCTCG 714 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||||||||||||||| |||| ||| Sbjct 713 GACACGATCGATAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCACCGGATCAG 654 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || || | ||| || || ||||| || |||| || || || |||||||||| Sbjct 653 CAGAGGCTGATATTCGCCGGGAAGCAGCTTGAAGACGGTCGAACACTGGCCGACTACAAC 594 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||| |||| |||| ||||| Sbjct 593 ATCCAGAAGGAGTCCACCTTGCACTTAGTG 564 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || || || || || || || ||||| || | || |||||| | || Sbjct 545 ATGCAGATATTTGTGAAGACTCTTACAGGAAAGACCATTACTTTGGAAGTCGAAAGCTCC 486 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || | | | ||||| ||||| || || ||||||| Sbjct 485 GACACGATCGACAACGTTAAAGCCAAGA-TCCAGGACAAGGAGGGTATTCCACCGGACCA 427 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || ||||| ||||| || || | ||| ||||| ||| ||||| Sbjct 426 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTCGAAGATGGGCGAACCCTTGCCGATTACAA 367 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||| ||| | || || || || || Sbjct 366 CATCCAGAAAGAGTCAACTCTTCACCTGGT 337 >seq127437 Length=6100 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || || || ||||| || |||||||||||| | || || || | Sbjct 2469 AATGCAAATCTTTGTTAAGACACTCACTGGAAAAACCATCACCCTTGAAGTAGAGAGTTC 2410 Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | || || | | |||| |||||| | ||||| ||||| |||||| | |||| Sbjct 2409 TGACACGATTGACAATG-TAAAGGCAAAAATCCAAGACAAGGAGGGAATCCCCCCAGACC 2351 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| | ||||||| || || |||||||| || || | || ||| | || |||| Sbjct 2350 AGCAGAGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGTCGGACCTTGGCAGATTACA 2291 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||| ||||| ||| |||| || ||| | || | || |||| || || Sbjct 2290 ACATTCAGAAAGAGTCCACCCTTCATTTGGTTCTCCGGCTGAGAGGTGG 2242 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||||||||| ||||| ||||| || || || |||||||| | || || || | | Sbjct 2241 AATGCAAATATTTGTAAAGACGCTGACCGGGAAGACCATCACTCTTGAGGTGGAGAGCTC 2182 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||| || || | ||||| ||||| |||||| | || || Sbjct 2181 TGACACAATCGACAATGTGAAGGCGAAGATCCAAGACAAGGAGGGTATCCCCCCAGATCA 2122 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | ||||||| || || |||||||| || || | | ||||| || ||||| Sbjct 2121 GCAGAGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGAAGGACCCTGGCTGATTACAA 2062 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| || ||||| |||| || || || || Sbjct 2061 CATACAAAAGGAATCCACCCTTCACCTTGT 2032 >seq83787 Length=2295 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || || || || || || ||| | || || || | | Sbjct 1680 ATGCAGATCTTTGTGAAAACCCTTACCGGAAAGACAATAACCCTAGAGGTTGAGAGCTCG 1739 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||||||||||||||| |||| ||| Sbjct 1740 GACACGATCGATAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCACCGGATCAG 1799 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || || | ||| || || ||||| || |||| || || || |||||||||| Sbjct 1800 CAGAGGCTGATATTCGCCGGGAAGCAGCTTGAAGACGGTCGAACTCTGGCCGACTACAAC 1859 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||| |||| |||| ||||| Sbjct 1860 ATCCAGAAGGAGTCCACCTTGCACTTAGTG 1889 >seq44755 Length=3421 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||||||||| || || || ||||| || || ||||||||| | || || || | | Sbjct 2740 AATGCAAATATTTGTTAAGACACTCACCGGAAAGACCATCACCCTTGAAGTTGAGAGCTC 2681 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | || | | | |||| ||||| | ||||| || || |||||| | ||||| Sbjct 2680 CGATACAGTTGACAATGTAAAGGCGAAAATCCAAGACAAGGAAGGAATCCCCCCTGACCA 2621 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| | | || | || || || ||||| || || | | || | || || || Sbjct 2620 GCAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGCAGAACGTTGGCAGATTATAA 2561 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| ||||||||| |||| ||||| || || | ||||||||||| || Sbjct 2560 CATTCAGAAGGAGTCCACACTGCACCTGGTCCTTCGCTTGAGGGGTGG 2513 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||||||||| || || || || || || || |||||||| | || || || | | Sbjct 2284 AATGCAAATATTTGTGAAGACACTGACTGGAAAGACCATCACTCTTGAAGTGGAGAGCTC 2225 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||| ||| || | ||||| ||||| |||||| | || || Sbjct 2224 TGACACAATCGACAATGTGAAGGCAAAGATCCAAGACAAGGAGGGTATCCCCCCAGATCA 2165 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | ||||||| || || |||||||| || || | | || || || ||||| Sbjct 2164 GCAGAGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGAAGGACTCTGGCTGATTACAA 2105 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| || ||||| |||| || || ||||| Sbjct 2104 CATTCAAAAGGAATCCACTCTTCACCTAGT 2075 >seq73220 Length=12354 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || ||||| || ||||| || ||| | || || || | Sbjct 7371 ATGCAAATTTTTGTGAAGACCCTCACTGGAAAAACTATTACCCTTGAAGTTGAGAGTTCA 7312 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | || | ||||| | ||||| ||||| || ||| | |||||| Sbjct 7311 GACACCATCGATAATGTGAAAGCTAAAATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 7252 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||| | ||||| ||||||||||| || | || || | ||||||||| Sbjct 7251 CAGAGGCTCATATTTGCGGGTAAACAGCTGGAAGATGGTCGGACATTGGCGGACTACAAC 7192 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| | || || || | || | || ||||| || ||| Sbjct 7191 ATCCAGAAGGAGTCTACCCTTCACTTGGTTCTCCGTTTGAGAGGTGGC 7144 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || ||||| || ||||| |||||| | || || || | | Sbjct 7599 ATGCAAATTTTTGTGAAGACCCTCACTGGAAAAACTATCACCCTTGAAGTTGAGAGCTCA 7540 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| | ||||| | ||||| ||||| || ||| | |||||| Sbjct 7539 GACACCATTGATAATGTCAAAGCGAAAATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 7480 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || || | || || || ||||| || || | || || | || || ||| Sbjct 7479 CAGAGGCTTATATTTGCTGGTAAGCAGCTCGAGGATGGCCGGACATTGGCTGATTATAAC 7420 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| ||| |||| || || | || | || || || |||||| Sbjct 7419 ATCCAGAAAGAGTCCACCCTTCACTTGGTTCTCCGTTTAAGAGGCGGC 7372 Score = 82.4 bits (90), Expect = 8e-11 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGA-AGC-C 40746 |||||||||||| || |||||||| || || || |||||||| | || || || || | Sbjct 7828 AATGCAAATATTTGTCAAAACGCTAACTGGAAAGACCATCACACTTGAAGTTGAGAGTTC 7769 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | ||| || || | | |||| ||| || | ||||| ||||| || || | ||| Sbjct 7768 AGATACAAT-TGACAATG-TGAAGGCAAAGATCCAGGACAAGGAGGGTATTCCTCCAGAC 7711 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | || |||| || || || |||||||| || | || || | || || Sbjct 7710 CAGCAGAGGCTTATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGGACATTGGCTGATTAT 7651 Query 40867 AACATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||||| |||| || || Sbjct 7650 AACATCCAGAAGGAGTCCACCCTTCA 7625 >seq207794 Length=1432 Score = 82.4 bits (90), Expect = 8e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||||||||| || || || || || || || |||||||| | || || || | | Sbjct 1116 AATGCAAATATTTGTGAAGACACTGACCGGAAAGACCATCACTCTTGAAGTGGAGAGCTC 1057 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||| ||| || | ||||| ||||| |||||| | || || Sbjct 1056 TGACACAATCGACAATGTGAAGGCAAAGATCCAGGACAAGGAGGGTATCCCCCCCGATCA 997 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | ||||||| || || |||||||| || || | | || || || ||||| Sbjct 996 GCAGAGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGAAGGACTCTGGCTGATTACAA 937 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| || ||||| |||| || || || || Sbjct 936 CATTCAAAAGGAATCCACCCTTCACCTGGT 907 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||||||||| ||||| || || || || || |||||||| | || || ||| | | Sbjct 1344 AATGCAAATATTTGTAAAGACACTAACTGGAAAGACCATCACGCTTGAGGTGGAAAGCTC 1285 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | | |||| |||||| | ||||| || || |||||| | ||||| Sbjct 1284 TGATACAATCGACAATGTAAAGGCAAAAATCCAAGACAAGGAAGGAATCCCCCCAGACCA 1225 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| | | || | || || || ||||| || || | | || | || || || Sbjct 1224 GCAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGCAGGACTTTGGCAGATTATAA 1165 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| ||||||||| |||| || || || || | ||| |||| || || Sbjct 1164 CATTCAGAAGGAGTCCACACTCCACCTTGTTCTTCGCCTGAGAGGTGG 1117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513863890133440