Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1 _202015-09-10] 210,444 sequences; 539,624,286 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq73220 123 3e-23 seq207794 118 1e-21 seq127437 118 1e-21 seq44755 109 6e-19 seq9834 109 6e-19 seq142724 104 3e-17 seq138849 104 3e-17 seq56209 104 3e-17 seq2835 104 3e-17 seq76175 100 3e-16 seq45179 100 3e-16 seq121659 98.7 1e-15 seq84576 86.0 7e-12 seq83787 84.2 2e-11 seq40217 84.2 2e-11 seq34330 84.2 2e-11 seq134790 82.4 9e-11 >seq73220 Length=12354 Score = 123 bits (136), Expect = 3e-23 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||||||||| | ||||| || | ||| ||| || || || || ||||||||| Sbjct 7373 CCGCCTCTTAAACGGAGAACCAAGTGAAGGGTGGACTCTTTCTGGATGTTATAATCAGCC 7432 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||||| | || || |||||||||||||| ||||| || | ||||||||| | || Sbjct 7433 AATGTCCGGCCATCCTCGAGCTGCTTACCAGCAAATATAAGCCTCTGCTGGTCTGGGGGA 7492 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | | |||||||||| |||||| ||||| | | | ||||| |||| || Sbjct 7493 ATACCCTCCTTGTCCTGGATTTTCGCTTTGACATTATCAATGGTGTCTGAGCTC---TCA 7549 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||| ||||| || || || ||||| ||||| |||||||| Sbjct 7550 ACTTCAAGGGTGATAGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCAT 7599 Score = 107 bits (118), Expect = 2e-18 Identities = 143/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| |||||||||||||| |||| |||||| | || ||||||||||| ||||| ||| Sbjct 6497 TCCTTCTGAATATTGTAATCTGCCAAGGTCCGCCCATCCTCTAGCTGCTTTCCAGCAAAT 6556 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 ||||| | |||||| || | || | | |||||||| | ||| | |||| || | | Sbjct 6557 ATGAGCCTCTGCTGATCTGGAGGGATACCCTCCTTGT-CTTGAATCTTTGCCTTCACATT 6615 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| ||||| || | ||||| ||||| || || || ||||| Sbjct 6616 ATCTATGGTGTCAGAGCTC---TCCACCTCAAGTGTGATCGTTTTACCTGTCAGGGTCTT 6672 Query 43169 TACAAAGATTTGCAT 43183 ||||| || ||||| Sbjct 6673 CACAAAAATCTGCAT 6687 Score = 104 bits (114), Expect = 3e-17 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | ||| | ||||| || | ||| |||||| || || || ||||||||| Sbjct 7601 CCACCTCTCAGACGGAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAATCAGCC 7660 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||||| | || || |||||||||||||| || || || | ||||||||| | || Sbjct 7661 AATGTCCGGCCATCCTCCAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGAGGA 7720 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGA--TTCCA 43134 | | |||||||||| ||| ||| || | | | | || ||| || | || | Sbjct 7721 ATACCCTCCTTGTCCTGGATCTTTGCCTTCA-CATTGTCA-ATTGTATCTGAACTCTCAA 7778 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || | |||||||| || || |||||||| || ||||| ||||||||| Sbjct 7779 CTTCAAGTGTGATGGTCTTTCCAGTTAGCGTTTTGACAAATATTTGCATT 7828 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || |||||||| ||||||| ||| || | || ||||||||||||||||| || Sbjct 6953 TCCTTCTGTATATTGTAGTCAGCCAAAGTTCGACCATCTTCTAGCTGCTTACCAGCAAAG 7012 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || | ||||||||| | || | | ||||||||| || |||| ||| | | Sbjct 7013 ATTAGCCTCTGCTGGTCCGGTGGAATACCTTCCTTGTCCTGGAGTTTTGCTTTCACATTG 7072 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| ||| || || || | ||||| ||||| || || || ||||| Sbjct 7073 TCGATAGTGTCTGAACTC---TCAACTTCAAGGGTGATAGTTTTACCAGTAAGGGTCTTC 7129 Query 43170 ACAAAGATTTGCAT 43183 ||||| |||||||| Sbjct 7130 ACAAATATTTGCAT 7143 >seq207794 Length=1432 Score = 118 bits (130), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||| ||||||||||||||||||| | || || ||||| |||||||| || Sbjct 925 TCCTTTTGAATGTTGTAATCAGCCAGAGTCCTTCCATCCTCAAGCTGTTTACCAGCAAAG 984 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| | |||||| |||| || | | |||||||||| ||| ||| || | | Sbjct 985 ATGAGCCTCTGCTGATCGGGGGGGATACCCTCCTTGTCCTGGATCTTTGCCTTCACATTG 1044 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| |||| ||||| || | |||||||| || || || || ||||| Sbjct 1045 TCGATTGTGTCAGAGCTC---TCCACTTCAAGAGTGATGGTCTTTCCGGTCAGTGTCTTC 1101 Query 43170 ACAAAGATTTGCATT 43184 ||||| ||||||||| Sbjct 1102 ACAAATATTTGCATT 1116 Score = 95.1 bits (104), Expect = 1e-14 Identities = 143/202 (71%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 42986 TGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACC 43045 |||| |||||| ||||| || ||||| |||| ||||| | || || |||||||| || Sbjct 1146 TGTGGACTCCTTCTGAATGTTATAATCTGCCAAAGTCCTGCCATCCTCAAGCTGCTTTCC 1205 Query 43046 AGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105 ||| || || | | |||||||| | || | | |||||||| ||||||| || Sbjct 1206 AGCAAAAATCAACCTTTGCTGGTCTGGGGGGATTCCTTCCTTGTCTTGGATTTTTGCCTT 1265 Query 43106 GAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 43162 | | | | || || ||| |||||| || | ||||||||| || || ||||| Sbjct 1266 TACATTGTCGATTGTATCAGAGCT---TTCCACCTCAAGCGTGATGGTCTTTCCAGTTAG 1322 Query 43163 CGTCTTTACAAAGATTTGCATT 43184 ||||||||||| ||||||||| Sbjct 1323 TGTCTTTACAAATATTTGCATT 1344 Score = 93.3 bits (102), Expect = 5e-14 Identities = 141/197 (72%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||||||||| |||||||| | || || | |||||| || || || Sbjct 696 CTCCTTCTGAATGTTGTAATCAGCAAGAGTCCGACCATCCTCCAACTGCTTCCCTGCAAA 755 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| | |||||| || | || | | ||||||||| ||| |||||| || | Sbjct 756 GATGAGCCTCTGCTGATCTGGAGGGATCCCTTCCTTGTCC-TGAATTTTTGCCTTCACAT 814 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| ||||| || | || || || || ||||| || |||| Sbjct 815 TATCTATGGTGTCTGAGCTC---TCCACCTCTAGTGTAATCGTCTTTCCCGTCAGGGTCT 871 Query 43168 TTACAAAGATTTGCATT 43184 | ||||| || |||||| Sbjct 872 TCACAAATATCTGCATT 888 >seq127437 Length=6100 Score = 118 bits (130), Expect = 1e-21 Identities = 166/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| ||||| | || | |||||||| | ||| ||| || ||||| |||||||| || Sbjct 2241 TCCACCTCTCAGCCGGAGAACCAAATGAAGGGTGGACTCTTTCTGAATGTTGTAATCTGC 2300 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || ||||| | || || ||||| |||||||| || ||||| | ||||||||| | || Sbjct 2301 CAAGGTCCGACCATCCTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGGGG 2360 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCG---CTCGATTC 43132 | | ||||||||| ||||||| || | | | | |||||| ||| || Sbjct 2361 GATTCCCTCCTTGTCTTGGATTTTTGCCTTTACATTGTCAATCGTGTCAGAACTC---TC 2417 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || | ||||||||||| || || || ||||| ||||||||||||||| Sbjct 2418 TACTTCAAGGGTGATGGTTTTTCCAGTGAGTGTCTTAACAAAGATTTGCATT 2469 Score = 105 bits (116), Expect = 8e-18 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||| || |||||||||||||| |||| | || || ||||| |||||||| || Sbjct 2050 TCCTTTTGTATGTTGTAATCAGCCAGGGTCCTTCCATCCTCAAGCTGTTTACCAGCAAAG 2109 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| | |||||| || | || | | ||||||||| ||| || || | | Sbjct 2110 ATGAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTCTTGGATCTTCGCCTTCACATTG 2169 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| |||| ||||| || | |||||||| || || || ||||||||| Sbjct 2170 TCGATTGTGTCAGAGCTC---TCCACCTCAAGAGTGATGGTCTTCCCGGTCAGCGTCTTT 2226 Query 43170 ACAAAGATTTGCATT 43184 ||||| ||||||||| Sbjct 2227 ACAAATATTTGCATT 2241 Score = 89.7 bits (98), Expect = 6e-13 Identities = 150/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| |||||| ||||| ||||||||||| || ||||| | || || Sbjct 1804 ACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGTGTCCGACCATCCTCC 1863 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | |||||| || || || || || | |||||| || | || | | |||||||||| || Sbjct 1864 AACTGCTTCCCTGCAAAGATCAGCCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCC-TG 1922 Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 43150 | |||| | || | | | | ||||| |||| ||||| || | ||||| || Sbjct 1923 AATTTTGGCCTTCACATTATCTATGGTGTCTGAGCTC---TCCACCTCTAGTGTGATCGT 1979 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || ||||| ||||| || ||||| Sbjct 1980 CTTTCCCGTCAGGGTCTTCACAAATATCTGCAT 2012 >seq44755 Length=3421 Score = 109 bits (120), Expect = 6e-19 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||| ||||||||||||||||||| | || || ||||| |||||||| || Sbjct 2093 TCCTTTTGAATGTTGTAATCAGCCAGAGTCCTTCCATCCTCAAGCTGTTTACCAGCAAAG 2152 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| | |||||| || | || | | ||||||||| ||| ||| || | | Sbjct 2153 ATGAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTCTTGGATCTTTGCCTTCACATTG 2212 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| |||| ||||| || | |||||||| || || || || ||||| Sbjct 2213 TCGATTGTGTCAGAGCTC---TCCACTTCAAGAGTGATGGTCTTTCCAGTCAGTGTCTTC 2269 Query 43170 ACAAAGATTTGCATT 43184 ||||| ||||||||| Sbjct 2270 ACAAATATTTGCATT 2284 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||||||||| |||||||| | || || | |||||| || || || Sbjct 1864 CTCCTTCTGAATGTTGTAATCAGCAAGAGTCCGACCATCCTCCAACTGCTTCCCTGCAAA 1923 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| | |||||| || | || | | ||||||||| ||| |||||| || | Sbjct 1924 GATGAGCCTCTGCTGATCTGGAGGGATCCCTTCCTTGTCC-TGAATTTTTGCCTTCACAT 1982 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| ||||| || | || || || || || || || |||| Sbjct 1983 TATCTATGGTGTCTGAGCTC---TCCACCTCTAGTGTAATCGTCTTTCCTGTCAGGGTCT 2039 Query 43168 TTACAAAGATTTGCAT 43183 | ||||| || ||||| Sbjct 2040 TCACAAATATCTGCAT 2055 >seq9834 Length=2319 Score = 109 bits (120), Expect = 6e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | ||| |||||| ||||| ||||||||||| ||||| ||| | Sbjct 270 ACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGCAAGAGTTCGCCC 211 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || ||||| || |||| ||||||||| | || | | ||||| Sbjct 210 ATCCTCAAGCTGCTTGCCGGCGAAAATCAGTCTCTGCTGGTCTGGTGGAATCCCTTCCTT 151 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| | || | || ||| | | | |||||| ||| || || | |||| Sbjct 150 GTCC-TGAATCTTCGCTTTCACGTTGTCAATGGTGTCGGAGCTTTCGACCTCCAGGGTGA 92 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || || || || || ||||| || ||||| Sbjct 91 TGGTCTTTCCGGTGAGGGTTTTCACAAAAATCTGCAT 55 Score = 104 bits (114), Expect = 3e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| |||| | | || || |||||||| || ||||| Sbjct 474 CTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCATCTTCCAGCTGCTTCCCGGCGAA 415 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || | |||||| || | || | | |||||||||| ||| | |||| ||||| Sbjct 414 GATCAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCC-TGAATCTTTGCTTTGACAT 356 Query 43111 TCGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | |||||| ||| ||||| || | ||||||||| || || || || |||| Sbjct 355 TATCAATGGTGTCGGAACTC---TCCACCTCCAGCGTGATGGTCTTTCCAGTCAGTGTCT 299 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||||||||| Sbjct 298 TCACGAAGATTTGCAT 283 >seq142724 Length=6502 Score = 104 bits (114), Expect = 3e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || ||||| |||| || |||||||| || ||||| Sbjct 3527 CTCCTTCTGGATGTTGTAGTCAGCTAGGGTCCGGCCGTCCTCGAGCTGCTTCCCGGCGAA 3586 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 |||||| || |||||||| | || | || ||||||||| ||| || || | | Sbjct 3587 TATGAGGCGTTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATT 3646 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| || ||||| || | || ||||| || |||||||| || || || Sbjct 3647 GTCGATGGTGTCAGAGGACTCCACCTCAAGGGTTATGGTCTTACCCGTTAGGGTTTTCAC 3706 Query 43172 AAAGATTTGCATTTT 43186 ||||| ||||| || Sbjct 3707 GAAGATCTGCATCTT 3721 >seq138849 Length=4585 Score = 104 bits (114), Expect = 3e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || |||||||| || || || || || |||| || ||||| || |||||||| Sbjct 1422 CTCCTTCTGGATATTGTAGTCGGCTAGGGTTCGGCCGTCCTCCAGCTGTTTGCCAGCGAA 1363 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | ||| | || |||||||| ||| || |||| | Sbjct 1362 GATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 1303 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| ||||| || || | || || || || |||||||| ||||| || Sbjct 1302 ATCGATCGTGTCAGATGATTCAACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTCTTCAC 1243 Query 43172 AAAGATTTGCATTTT 43186 || || ||||| || Sbjct 1242 GAAAATCTGCATCTT 1228 >seq56209 Length=7549 Score = 104 bits (114), Expect = 3e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || |||||||| || || || || || |||| || ||||| || |||||||| Sbjct 2939 CTCCTTCTGGATATTGTAGTCGGCTAGGGTTCGGCCGTCCTCCAGCTGTTTGCCAGCGAA 2880 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | ||| | || |||||||| ||| || |||| | Sbjct 2879 GATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 2820 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| ||||| || || | || || || || |||||||| ||||| || Sbjct 2819 ATCGATCGTGTCAGATGATTCAACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTCTTCAC 2760 Query 43172 AAAGATTTGCATTTT 43186 || || ||||| || Sbjct 2759 GAAAATCTGCATCTT 2745 >seq2835 Length=4848 Score = 104 bits (114), Expect = 3e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || ||||| || |||||||| Sbjct 775 CTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCCAGCTGTTTTCCAGCGAA 716 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || ||||||||| ||| || |||| | Sbjct 715 GATGAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATT 656 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| ||||| || || | || ||||| || |||||||| || || || Sbjct 655 GTCGATGGTGTCAGATGATTCAACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCAC 596 Query 43172 AAAGATTTGCATTTT 43186 |||||| ||||| || Sbjct 595 AAAGATCTGCATCTT 581 >seq76175 Length=8586 Score = 100 bits (110), Expect = 3e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || ||||| || |||||||| Sbjct 2448 CTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCCAGCTGTTTTCCAGCGAA 2389 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | || ||||||||| ||| || |||| | Sbjct 2388 GATAAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATT 2329 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| |||||| || || | || ||||| || |||||||| || || || Sbjct 2328 GTCGATGGTGTCAGACGATTCAACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCAC 2269 Query 43172 AAAGATTTGCATTTT 43186 ||||| ||||| || Sbjct 2268 GAAGATCTGCATCTT 2254 >seq45179 Length=1454 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| | | ||| | |||||| |||| || ||| || || |||||||| ||||| Sbjct 557 TCCTCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCTTTCTGGATATTGTAGTCAGC 616 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || | || || ||||||||||| ||||| || || | ||||||||| | || Sbjct 617 GAGGGTTCGGCCATCTTCAAGCTGCTTACCGGCGAAGATCAGCCTCTGCTGGTCCGGTGG 676 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 43134 | || |||||||||| ||| || || | ||| | | | |||||| ||| | Sbjct 677 AATGCCCTCCTTGTCCTGGATCTTAGCCTTCA-CGTTGTCAATGGTGTCGGAGCTTTCGA 735 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | |||||||| || || || || || || ||||| || ||||| Sbjct 736 CCTCCAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAAATCTGCAT 784 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| |||| | | || || |||||||| |||||||| Sbjct 137 CTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCATCTTCCAGCTGCTTCCCAGCGAA 196 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || | | |||||| || | || | | ||||||||| ||| | |||| ||| | Sbjct 197 GATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTGTCC-TGAATCTTTGCTTTCACAT 255 Query 43111 TCGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | |||||| ||| ||||| || | ||||||||| || || || || |||| Sbjct 256 TATCAATGGTGTCGGAACTC---TCCACCTCCAGCGTGATGGTCTTCCCAGTCAGAGTCT 312 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||||||||| Sbjct 313 TCACGAAGATTTGCAT 328 Score = 93.3 bits (102), Expect = 5e-14 Identities = 153/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | || ||| || ||||| |||||||| || ||||| || | Sbjct 341 ACGAAGCACCAAGTGGAGGGTTGACTCTTTCTGAATGTTGTAATCCGCGAGAGTTCGGCC 400 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || ||||||||||| ||||| || || | ||||||||| | || | || |||||| Sbjct 401 GTCTTCCAGCTGCTTACCTGCGAAAATCAGCCTCTGCTGGTCCGGTGGAATGCCCTCCTT 460 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 ||| ||| || ||| | ||| | | | |||||| ||| || || | || | Sbjct 461 ATCCTGGATCTTAGCTTTCA-CGTTGTCGATGGTGTCGGAGCTTTCGACCTCTAGAGTAA 519 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || || || || || || || ||||| || |||||| Sbjct 520 TTGTCTTTCCGGTCAGAGTTTTAACAAAAATCTGCATT 557 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || ||||||||||| || || || ||| | || || ||||||||||| || || Sbjct 821 CTCTTTCTGGATATTGTAATCGGCAAGGGTTCGCCCATCTTCGAGCTGCTTACCGGCAAA 880 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | ||||||||| | || | | |||||||||| ||| || ||| | | Sbjct 881 GATCAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCCTGGATCTTGGCTTTAACATT 940 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| ||| || || | || ||||| || || || || ||||| || Sbjct 941 GTCGATGGTGTCGGAGCTTTCGACTTCCAAAGTAATGGTCTTTCCTGTAAGAGTCTTCAC 1000 Query 43172 AAAGATTTGCAT 43183 ||| || ||||| Sbjct 1001 AAATATCTGCAT 1012 >seq121659 Length=2328 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | ||| | |||||| |||| || ||| |||||||| ||||| || || Sbjct 91 CCTCCACGAAGACGGAGCACCAAGTGCAGAGTTGACTCTTTTTGAATGTTGTAGTCGGCG 150 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || ||||||||||||||||| || || | ||||||||| | || Sbjct 151 AGGGTTCGGCCATCTTCCAGCTGCTTACCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGA 210 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | || |||||| ||| ||| || || | ||| | | | |||||| ||| || Sbjct 211 ATGCCCTCCTTATCCTGGATCTTAGCCTTCA-CGTTGTCAATGGTGTCGGAGCTTTCGAC 269 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| || || || || || || ||||| || ||||| Sbjct 270 CTCCAGGGTGATGGTCTTCCCGGTAAGGGTTTTCACAAAAATCTGCAT 317 >seq84576 Length=1122 Score = 86.0 bits (94), Expect = 7e-12 Identities = 149/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| |||||| ||||| ||||||||||| || ||||| | || || Sbjct 803 ACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGTGTCCGACCATCCTCC 862 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | |||||| || || || || || | |||||| || | || | | |||||||||| || Sbjct 863 AACTGCTTCCCTGCAAAGATCAGCCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCC-TG 921 Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 43150 | |||| | || | | | | ||||| |||| ||||| || | ||||| || Sbjct 922 AATTTTGGCCTTCACATTATCTATGGTGTCTGAGCTC---TCCACCTCTAGTGTGATCGT 978 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || || ||||| ||||| || ||||| Sbjct 979 CTTTCCTGTCAGGGTCTTCACAAATATCTGCAT 1011 >seq83787 Length=2295 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || ||||||||||| || || || ||| | || || |||||||| || || || Sbjct 2099 CTCTTTCTGGATATTGTAATCGGCAAGGGTTCGCCCATCTTCGAGCTGCTTGCCGGCAAA 2040 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | ||||||||| | || | | |||||||||| || | || | || | ||| Sbjct 2039 GATCAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCC-TGGATCTTGGCTTTAACGT 1981 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||||| ||| || || | || ||||| || || || || || || | Sbjct 1980 TGTCGATCGTGTCGGAGCTTTCGACTTCCAAAGTAATGGTCTTTCCTGTAAGAGTTTTCA 1921 Query 43171 CAAAGATTTGCAT 43183 |||| || ||||| Sbjct 1920 CAAATATCTGCAT 1908 >seq40217 Length=1601 Score = 84.2 bits (92), Expect = 2e-11 Identities = 67/79 (85%), Gaps = 4/79 (5%) Strand=Plus/Minus Query 60073 GCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTAC- 60131 || ||| ||||||||| |||| |||||||||||||||| ||||||||||||||||||| Sbjct 602 GCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTCACCACTATACTACA 543 Query 60132 -CGA--GGATTGAATATAT 60147 ||| ||||||| |||| Sbjct 542 ACGACTTGATTGAAAATAT 524 >seq34330 Length=1942 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||||| || || || ||| ||||||||| |||| |||||||||||||||| ||||| Sbjct 218 AAAATTATCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACT 277 Query 60118 CACCACTATACTAC 60131 |||||||||||||| Sbjct 278 CACCACTATACTAC 291 >seq134790 Length=2909 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| |||| || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 745 AAAAGATTTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 686 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 685 TCACCACTATACTAC 671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570313405212320