Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1 _202015-09-10] 210,444 sequences; 539,624,286 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq74520 107 4e-18 >seq74520 Length=9548 Score = 107 bits (118), Expect = 4e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 || || || || |||| ||||| ||||||||| || |||| || || ||||| || ||| Sbjct 4241 GACTTTGACTATGATTACTTTGGTTTCAAAACCCTTGAGAGGTCCTACCTCCTGAAGATT 4182 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 | || ||| | || ||| | |||||||||||||||| |||| |||| || |||||| Sbjct 4181 CAAGGGAAGGTTGTAGAAAGGCCTCAGCACATGTTGATGAGAGTTTCTGTTGGAATTCAC 4122 Query 248929 AAGGATGACATAGA 248942 ||||||||||| || Sbjct 4121 AAGGATGACATTGA 4108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1070871188891392