Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1 _202015-09-10] 210,444 sequences; 539,624,286 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq76562 89.7 4e-13 >seq76562 Length=2025 Score = 89.7 bits (98), Expect = 4e-13 Identities = 108/146 (74%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 19971 TTTATCATT-TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATG 20029 || ||||| ||||||| | | |||||| || | || ||||| || |||||||| ||| Sbjct 1657 TTAATCATAGTTCCTCCCCTGAGCCTCAAAACAAGGTGAAGTGTGGACTCTTTTTGGATG 1716 Query 20030 TTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGT 20089 || ||||| | | ||| | |||||||||||||||||| ||| |||| | ||||| Sbjct 1717 TTATAATCTGCAAGAGTGCGACCATCTTCCAATTGTTTGCCAGCAAAAATCAATCTCTGC 1776 Query 20090 TGATCGACGGGCACGCCTTCTTTGTC 20115 ||||| || | |||||| ||||| Sbjct 1777 TGATCAGGAGGAATGCCTTCCTTGTC 1802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418511048518764