Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1 _202015-09-10] 210,444 sequences; 539,624,286 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq45179 123 6e-23 seq138849 122 2e-22 seq121659 120 7e-22 seq56209 116 9e-21 seq127437 109 1e-18 seq84576 107 5e-18 seq83787 105 2e-17 seq9834 105 2e-17 seq207794 102 2e-16 seq44755 100 7e-16 seq82795 98.7 2e-15 seq203223 95.1 3e-14 >seq45179 Length=1454 Score = 123 bits (136), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || ||||| | ||| || || ||||| || ||||| || Sbjct 102 CCACCACGGAGGCGGAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCC 161 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | || ||||| | || || || |||||||||| | ||| ||| |||| Sbjct 162 AGGGTCCTCCCATCTTCCAGCTGCTTCCCAGCGAAGATCAACCTCTGCTGATCCGGTGGG 221 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || ||||| || ||||| || || |||||||| || || || | ||| ||| || Sbjct 222 ATCCCTTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATGGTGTCGGAACTC---TCC 278 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||||||| |||||||| ||||||||||| ||||| || ||||| Sbjct 279 ACCTCCAGCGTGATGGTCTTCCCAGTCAGAGTCTTCACGAAGATTTGCAT 328 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| || || || || || ||||| || || |||||||| | || || |||||||| Sbjct 366 TCTTTCTGAATGTTGTAATCCGCGAGAGTTCGGCCGTCTTCCAGCTGCTTACCTGCGAAA 425 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || ||| || || || ||||||||||| || ||||||||||| Sbjct 426 ATCAGCCTCTGCTGGTCCGGTGGAATGCCCTCCTTATCCTGGATCTTAGCTTTCACGTTG 485 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||| || || || || || ||||| ||||||||||| || || Sbjct 486 TCGATGGTGTCGGAGCTTTCGACCTCTAGAGTAATTGTCTTTCCGGTCAGAGTTTTAACA 545 Query 288463 AATATCTGCATT 288474 || ||||||||| Sbjct 546 AAAATCTGCATT 557 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | ||| || | || | ||| || || ||||| || |||||||| Sbjct 1014 CCACCGCGGAGACGAAGCACTAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 1073 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | ||||| || ||||| ||||| | ||| ||| |||| Sbjct 1074 AGTGTTCGACCGTCTTCAAGCTGTTTCCCGGCGAATATCAGCCTCTGCTGATCCGGTGGG 1133 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || ||||| || ||||| || || || || || || || | || |||| || Sbjct 1134 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCGATCGTGTCGGAGCTC---TCA 1190 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| ||||| ||||| || || || |||||||| Sbjct 1191 ACCTCTAGGGTTATGGTCTTTCCGGTAAGAGTTTTAACAAAGATCTGCAT 1240 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| |||||||| ||||| ||||| || || || ||||| | || || || |||||| Sbjct 594 TCTTTCTGGATATTGTAGTCAGCGAGGGTTCGGCCATCTTCAAGCTGCTTACCGGCGAAG 653 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || ||| || || || || |||||||| || || |||||||| Sbjct 654 ATCAGCCTCTGCTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTG 713 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||| || || || ||||| ||||| ||||| || || || || Sbjct 714 TCAATGGTGTCGGAGCTTTCGACCTCCAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACA 773 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 774 AAAATCTGCAT 784 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| |||||||| || ||||| || || || || ||||| | || || || || ||| Sbjct 822 TCTTTCTGGATATTGTAATCGGCAAGGGTTCGCCCATCTTCGAGCTGCTTACCGGCAAAG 881 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || ||| || || || || |||||||| || ||||| || || Sbjct 882 ATCAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCCTGGATCTTGGCTTTAACATTG 941 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||| ||||| | || || ||||| || || |||||||| || Sbjct 942 TCGATGGTGTCGGAGCTTTCGACTTCCAAAGTAATGGTCTTTCCTGTAAGAGTCTTCACA 1001 Query 288463 AATATCTGCAT 288473 ||||||||||| Sbjct 1002 AATATCTGCAT 1012 >seq138849 Length=4585 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || || | || || || |||||||| |||||||| Sbjct 1457 CCACCACGGAGGCGAAGCACCAGGTGGAGGGTTGACTCCTTCTGGATATTGTAGTCGGCT 1398 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | ||||| || |||||||| || ||||| || ||| Sbjct 1397 AGGGTTCGGCCGTCCTCCAGCTGTTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 1338 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || ||||| || || || || || || || | || ||||| || Sbjct 1337 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCGATCGTGTCAGATGATTCAACC 1278 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||||||||| || || ||||| ||||| |||||||| Sbjct 1277 TCTAGGGTTATCGTCTTCCCCGTTAGGGTCTTCACGAAAATCTGCAT 1231 >seq121659 Length=2328 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 |||||||| || || ||||||||||| || || || ||||| | || || || |||||| Sbjct 127 TCTTTTTGAATGTTGTAGTCGGCGAGGGTTCGGCCATCTTCCAGCTGCTTACCAGCGAAG 186 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || ||| || || || ||||||||||| || || |||||||| Sbjct 187 ATCAGCCTCTGCTGGTCTGGTGGAATGCCCTCCTTATCCTGGATCTTAGCCTTCACGTTG 246 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||| || || || ||||| ||||||||||| || || || || Sbjct 247 TCAATGGTGTCGGAGCTTTCGACCTCCAGGGTGATGGTCTTCCCGGTAAGGGTTTTCACA 306 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 307 AAAATCTGCAT 317 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | ||| || | || | ||| || || ||||| || |||||||| Sbjct 547 CCACCGCGGAGACGAAGCACTAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 606 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | || || || ||||| ||||| | ||| ||| |||| Sbjct 607 AGTGTTCGACCGTCTTCAAGCTGCTTCCCGGCGAATATCAGCCTCTGCTGATCCGGTGGG 666 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || ||||| || ||||| || || || || || || || | || |||| || Sbjct 667 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCGATCGTGTCCGAGCTC---TCA 723 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| ||||| || || ||||| || |||||||| Sbjct 724 ACCTCTAGGGTTATTGTCTTTCCGGTAAGGGTTTTGACAAAGATCTGCAT 773 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || ||||| || || || || ||||| | || || || || ||| Sbjct 355 TCTTTCTGGATGTTGTAATCGGCAAGGGTTCGCCCATCTTCGAGCTGCTTGCCGGCAAAG 414 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || ||| || || || || |||||||| || ||||| ||||| Sbjct 415 ATCAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCCTGGATCTTGGCTTTAACGTTG 474 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||| ||||| | || || ||||| || || |||||||| || Sbjct 475 TCGATCGTGTCGGAGCTTTCGACTTCCAAAGTAATGGTCTTTCCTGTAAGAGTCTTCACA 534 Query 288463 AATATCTGCAT 288473 ||||||||||| Sbjct 535 AATATCTGCAT 545 >seq56209 Length=7549 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | || || || |||||||| |||||||| Sbjct 2974 CCACCACGGAGGCGGAGCACCAGGTGGAGGGTTGACTCCTTCTGGATATTGTAGTCGGCT 2915 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | ||||| || |||||||| || ||||| || ||| Sbjct 2914 AGGGTTCGGCCGTCCTCCAGCTGTTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 2855 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || ||||| || || || || || || || | || ||||| || Sbjct 2854 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCGATCGTGTCAGATGATTCAACC 2795 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||||||||| || || ||||| ||||| |||||||| Sbjct 2794 TCTAGGGTTATCGTCTTCCCCGTTAGGGTCTTCACGAAAATCTGCAT 2748 >seq127437 Length=6100 Score = 109 bits (120), Expect = 1e-18 Identities = 166/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| || || |||| ||| ||| ||||| || || || || || Sbjct 2014 CCTCCACGAAGGCGAAGAACAAGGTGAAGGGTGGATTCCTTTTGTATGTTGTAATCAGCC 2073 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || | ||||| || || ||||| || | ||| ||| |||||| Sbjct 2074 AGGGTCCTTCCATCCTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGA---TCTGGG 2130 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || || ||||| ||||| ||||| || || || | || |||| Sbjct 2131 GGGATACCCTCCTTGTCTTGGATCTTCGCCTTCACATTGTCGATTGTGTCAGAGCTC--- 2187 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || ||||| |||||||||||||| ||||| || ||||| |||||| Sbjct 2188 TCCACCTCAAGAGTGATGGTCTTCCCGGTCAGCGTCTTTACAAATATTTGCATT 2241 Score = 107 bits (118), Expect = 5e-18 Identities = 165/233 (71%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| || | |||| ||| || || || || || || || || Sbjct 1786 CCCCCACGAAGACGAAGGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCA 1845 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || || || || || || || || || ||||| |||||||| | ||| ||| ||||| Sbjct 1846 AGTGTCCGACCATCCTCCAACTGCTTCCCTGCAAAGATCAGCCTCTGCTGA---TCTGGA 1902 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||| || || || ||||| ||||| || ||||| || ||||| | || |||| Sbjct 1903 GGGATCCCCTCCTTGTCCTGAATTTTGGCCTTCACATTATCTATGGTGTCTGAGCTC--- 1959 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 1960 TCCACCTCTAGTGTGATCGTCTTTCCCGTCAGGGTCTTCACAAATATCTGCAT 2012 Score = 96.9 bits (106), Expect = 8e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| || || ||||| ||||| | || | || || || | || ||||| || || Sbjct 2506 TCTTTCTGAATGTTATAATCGGCCAAAGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAA 2565 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | || ||| | ||||||||||| || || ||||||||||| || || || Sbjct 2566 ATCAACCTTTGCTGATCAGGGGGGATTCCTTCCTTGTCTTGGATTTTCGCCTTTACATTG 2625 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| |||| || ||||| || ||||| ||||| || || || ||||| Sbjct 2626 TCAATCGTATCAGAGCTC---TCAACTTCAAGGGTGATGGTCTTTCCAGTGAGTGTCTTA 2682 Query 288460 ACGAATATCTGCATT 288474 || ||||| |||||| Sbjct 2683 ACAAATATTTGCATT 2697 >seq84576 Length=1122 Score = 107 bits (118), Expect = 5e-18 Identities = 165/233 (71%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| || | |||| ||| || || || || || || || || Sbjct 785 CCCCCACGAAGACGAAGGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCA 844 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || || || || || || || || || ||||| |||||||| | ||| ||| ||||| Sbjct 845 AGTGTCCGACCATCCTCCAACTGCTTCCCTGCAAAGATCAGCCTCTGCTGA---TCTGGA 901 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||| || || || ||||| ||||| || ||||| || ||||| | || |||| Sbjct 902 GGGATCCCCTCCTTGTCCTGAATTTTGGCCTTCACATTATCTATGGTGTCTGAGCTC--- 958 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 959 TCCACCTCTAGTGTGATCGTCTTTCCTGTCAGGGTCTTCACAAATATCTGCAT 1011 >seq83787 Length=2295 Score = 105 bits (116), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | ||| || | || | ||| || || ||||| || |||||||| Sbjct 1906 CCACCGCGGAGACGAAGCACTAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 1847 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | || || || ||||| ||||| | ||| ||| |||| Sbjct 1846 AGAGTTCGACCGTCTTCAAGCTGCTTCCCGGCGAATATCAGCCTCTGCTGATCCGGTGGG 1787 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || ||||| || ||||| || || || || || || || | || |||| || Sbjct 1786 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCGATCGTGTCCGAGCTC---TCA 1730 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| ||||| || || || || || |||||||| Sbjct 1729 ACCTCTAGGGTTATTGTCTTTCCGGTAAGGGTTTTCACAAAGATCTGCAT 1680 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| |||||||| || ||||| || || || || ||||| | || || || || ||| Sbjct 2098 TCTTTCTGGATATTGTAATCGGCAAGGGTTCGCCCATCTTCGAGCTGCTTGCCGGCAAAG 2039 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || ||| || || || || |||||||| || ||||| ||||| Sbjct 2038 ATCAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCCTGGATCTTGGCTTTAACGTTG 1979 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||| ||||| | || || ||||| || || ||||| || || Sbjct 1978 TCGATCGTGTCGGAGCTTTCGACTTCCAAAGTAATGGTCTTTCCTGTAAGAGTTTTCACA 1919 Query 288463 AATATCTGCAT 288473 ||||||||||| Sbjct 1918 AATATCTGCAT 1908 >seq9834 Length=2319 Score = 105 bits (116), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || ||||| | || || || ||||| || ||||| || Sbjct 509 CCACCACGGAGGCGGAGGACAAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCC 450 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | || ||||| | || || || ||||||||||| | ||| ||| |||| Sbjct 449 AGGGTCCTCCCATCTTCCAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGATCCGGTGGG 390 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || || || || ||||| || || ||||| || || || || | ||| ||| || Sbjct 389 ATCCCCTCCTTGTCCTGAATCTTTGCTTTGACATTATCAATGGTGTCGGAACTC---TCC 333 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 332 ACCTCCAGCGTGATGGTCTTTCCAGTCAGTGTCTTCACGAAGATTTGCAT 283 Score = 95.1 bits (104), Expect = 3e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| || | || | ||| || || || || || || || || Sbjct 281 CCACCGCGCAGACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGCA 222 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || ||||| ||||| | ||| || ||| Sbjct 221 AGAGTTCGCCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGTCTCTGCTGGTCTGGTGGA 162 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || ||||| || |||||||||||||| || || | ||| ||| || Sbjct 161 ATCCCTTCCTTGTCCTGAATCTTCGCTTTCACGTTGTCAATGGTGTCGGAGCTTTCGACC 102 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| || || || || || |||||||| Sbjct 101 TCCAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAAATCTGCAT 55 >seq207794 Length=1432 Score = 102 bits (112), Expect = 2e-16 Identities = 143/198 (72%), Gaps = 12/198 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || || || || || || || || || || || || || ||||| ||| Sbjct 697 TCCTTCTGAATGTTGTAATCAGCAAGAGTCCGACCATCCTCCAACTGCTTCCCTGCAAAG 756 Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | ||| ||| ||||| ||| ||||| || ||||| ||||| || ||||| Sbjct 757 ATGAGCCTCTGCTGA---TCTGGAGGGATCCCTTCCTTGTCCTGAATTTTTGCCTTCACA 813 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || ||||| | || |||| || || || || || |||||||| || ||||| ||| Sbjct 814 TTATCTATGGTGTCTGAGCTC---TCCACCTCTAGTGTAATCGTCTTTCCCGTCAGGGTC 870 Query 288457 TTGACGAATATCTGCATT 288474 || || |||||||||||| Sbjct 871 TTCACAAATATCTGCATT 888 >seq44755 Length=3421 Score = 100 bits (110), Expect = 7e-16 Identities = 142/197 (72%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || || || || || || || || || || || || || ||||| ||| Sbjct 1865 TCCTTCTGAATGTTGTAATCAGCAAGAGTCCGACCATCCTCCAACTGCTTCCCTGCAAAG 1924 Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | ||| ||| ||||| ||| ||||| || ||||| ||||| || ||||| Sbjct 1925 ATGAGCCTCTGCTGA---TCTGGAGGGATCCCTTCCTTGTCCTGAATTTTTGCCTTCACA 1981 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || ||||| | || |||| || || || || || |||||||| || ||||| ||| Sbjct 1982 TTATCTATGGTGTCTGAGCTC---TCCACCTCTAGTGTAATCGTCTTTCCTGTCAGGGTC 2038 Query 288457 TTGACGAATATCTGCAT 288473 || || ||||||||||| Sbjct 2039 TTCACAAATATCTGCAT 2055 Score = 87.8 bits (96), Expect = 4e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || ||||| || || | ||| | || || || | || ||||| || || Sbjct 2549 TCCTTCTGAATGTTATAATCTGCCAACGTTCTGCCATCCTCAAGCTGCTTTCCAGCAAAA 2608 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | || || | ||||||||||| || || ||||||||||| || || || Sbjct 2609 ATCAACCTTTGCTGGTCAGGGGGGATTCCTTCCTTGTCTTGGATTTTCGCCTTTACATTG 2668 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || | | ||| |||| || ||||| || ||||| ||||| ||||| || ||||| Sbjct 2669 TCAACTGTATCGGAGCTC---TCAACTTCAAGGGTGATGGTCTTTCCGGTGAGTGTCTTA 2725 Query 288460 ACGAATATCTGCATT 288474 || ||||| |||||| Sbjct 2726 ACAAATATTTGCATT 2740 Score = 84.2 bits (92), Expect = 5e-11 Identities = 161/235 (69%), Gaps = 12/235 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | || | ||| || || || | ||| || || || || ||||| || || Sbjct 2284 TCCACCTCTCAGGCGAAGAACAAGGTGGAGTGTGGACTCCTTCTGAATGTTATAATCTGC 2343 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || | || || || | || ||||| || || |||| | || || ||||| Sbjct 2344 CAAAGTCCTGCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTTTGCTGG---TCTGG 2400 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 | |||||||| || || ||||||||||| || || || || || | ||| ||| Sbjct 2401 GGGGATTCCTTCCTTGTCTTGGATTTTCGCCTTTACATTGTCGATTGTATCAGAGCT--- 2457 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || || || ||||| ||||| || ||||| ||||| || ||||| |||||| Sbjct 2458 TTCCACCTCAAGTGTGATGGTCTTTCCAGTCAGTGTCTTTACAAATATTTGCATT 2512 >seq82795 Length=1924 Score = 98.7 bits (108), Expect = 2e-15 Identities = 154/217 (71%), Gaps = 10/217 (5%) Strand=Plus/Plus Query 269113 GAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTC 269172 |||| ||||||| | || ||||| | || || || | | || ||||| | ||| Sbjct 401 GAAAGAGAGTTCGTCTGCGACGCGTTACCGTGCGCTCTAGTGGGGATGAACAGTGCTCTA 460 Query 269173 ATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCAC--TCGGTTATGAGA 269230 |||| |||||| ||||||||||| || ||||| || | |||| | | ||||| | || Sbjct 461 ATGAGTCAATACATCGAATTCGTTGCCGATCG--CCTGCTCGGCGCCTTGGGTTACGGGA 518 Query 269231 AAGTGTACAA---TTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAA 269287 | ||||||| ||| |||||| |||| || ||||| ||||| || | | |||| Sbjct 519 AGATGTACAACGTTTC---GAATCCGTTCGACTGGATGGAGCTAATCTCTTTGCAGGGAA 575 Query 269288 AGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324 |||| ||||||||||| ||| | || | || ||||| Sbjct 576 AGACCAACTTCTTCGAGAAGAGGGTTGGGGAATATCA 612 >seq203223 Length=1923 Score = 95.1 bits (104), Expect = 3e-14 Identities = 143/200 (72%), Gaps = 10/200 (5%) Strand=Plus/Plus Query 269113 GAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTC 269172 |||| ||||||| | || ||||| | || || || | | || ||||| | ||| Sbjct 401 GAAAGAGAGTTCGTCTGCGACGCGTTACCGTGCGCTCTAGTGGGGATGAACAGTGCTCTA 460 Query 269173 ATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCAC--TCGGTTATGAGA 269230 |||| ||||| ||||||||||| || ||||| || | |||| | | ||||| | || Sbjct 461 ATGAGCCAATACATCGAATTCGTTGCCGATCG--CCTGCTCGGCGCCTTGGGTTACGGGA 518 Query 269231 AAGTGTACAA---TTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAA 269287 | ||||||| ||| |||||| |||| || ||||||||||| || | | |||| Sbjct 519 AGATGTACAACGTTTC---GAATCCGTTCGACTGGATGGAACTAATCTCTTTGCAGGGAA 575 Query 269288 AGACGAACTTCTTCGAAAAG 269307 |||| ||||||||||| ||| Sbjct 576 AGACCAACTTCTTCGAGAAG 595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176473681621032