Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1
_202015-09-10] 210,444 sequences; 539,624,286 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq207794 125 7e-24
seq44755 125 7e-24
seq127437 120 3e-22
seq45179 120 3e-22
seq73220 118 1e-21
seq9834 109 5e-19
seq121659 107 2e-18
seq83787 107 2e-18
seq138849 96.9 3e-15
seq76175 95.1 1e-14
seq56209 95.1 1e-14
seq2835 95.1 1e-14
seq195588 89.7 5e-13
seq119444 89.7 5e-13
>seq207794
Length=1432
Score = 125 bits (138), Expect = 7e-24
Identities = 156/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || |||| || ||||| ||||||||||||||||| || | || | | ||
Sbjct 903 AAGAACCAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAATCAGCCAGAGTCCTTCCATC 962
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|||||||| || || ||| | ||||||| |||||| ||||| || || || || || ||
Sbjct 963 CTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCGGGGGGGATACCCTCCTTGTC 1022
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || ||| ||| ||| || | ||| ||| | |||||||| | ||| | |||
Sbjct 1023 CTGGATCTTTGCCTTCACATTGTCGATTGTGTCAGAGCTCTCCACTTCAAGAGTGATGGT 1082
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||| ||||||| || || || || |||||||||
Sbjct 1083 CTTTCCGGTCAGTGTCTTCACAAATATTTGCATT 1116
Score = 120 bits (132), Expect = 3e-22
Identities = 155/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || || | || || || || |||||||| |||||||| | || | | ||
Sbjct 1131 AAGAACAAGGTGGAGTGTGGACTCCTTCTGAATGTTATAATCTGCCAAAGTCCTGCCATC 1190
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||||||||| || ||| |||| | || |||||||| || || |||||||| || ||
Sbjct 1191 CTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGGGATTCCTTCCTTGTC 1250
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| |||||| ||||||| || | ||||||| | ||||| || | || | |||
Sbjct 1251 TTGGATTTTTGCCTTTACATTGTCGATTGTATCAGAGCTTTCCACCTCAAGCGTGATGGT 1310
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||| || || | || ||||| || |||||||||
Sbjct 1311 CTTTCCAGTTAGTGTCTTTACAAATATTTGCATT 1344
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || || || || |||||||||||||| || | || || | || || | ||||
Sbjct 685 TGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTCCGACCATCCTCCAACTGC 744
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| || ||| | ||||||| |||||| || ||||| || ||||| || || || ||||||
Sbjct 745 TTCCCTGCAAAGATGAGCCTCTGCTGATCTGGAGGGATCCCTTCCTTGTCCTGAATTTTT 804
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| ||| || | || || | ||||| |||| || | ||||| || |||
Sbjct 805 GCCTTCACATTATCTATGGTGTCTGAGCTCTCCACCTCTAGTGTAATCGTCTTTCCCGTC 864
Query 64421 AAAGTTTTTACGAAAATTTGCATT 64444
| || || || || || ||||||
Sbjct 865 AGGGTCTTCACAAATATCTGCATT 888
>seq44755
Length=3421
Score = 125 bits (138), Expect = 7e-24
Identities = 156/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| ||||| |||| || ||||| ||||||||||||||||| || | || | | ||
Sbjct 2071 AAGAACTAGGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCCAGAGTCCTTCCATC 2130
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|||||||| || || ||| | ||||||| |||||| || || || || || || || ||
Sbjct 2131 CTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTC 2190
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| || ||| ||| ||| || | ||| ||| | |||||||| | ||| | |||
Sbjct 2191 TTGGATCTTTGCCTTCACATTGTCGATTGTGTCAGAGCTCTCCACTTCAAGAGTGATGGT 2250
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||| || |||| || || || || |||||||||
Sbjct 2251 CTTTCCAGTCAGTGTCTTCACAAATATTTGCATT 2284
Score = 125 bits (138), Expect = 7e-24
Identities = 156/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || || | || || || || |||||||| |||||||| | || | | ||
Sbjct 2299 AAGAACAAGGTGGAGTGTGGACTCCTTCTGAATGTTATAATCTGCCAAAGTCCTGCCATC 2358
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||||||||| |||||| |||| | || |||||||| || || |||||||| || ||
Sbjct 2359 CTCAAGCTGCTTTCCGGCAAAAATCAACCTTTGCTGGTCTGGGGGGATTCCTTCCTTGTC 2418
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| ||||| ||||||| || | ||||||| | ||||| || | || | |||
Sbjct 2419 TTGGATTTTCGCCTTTACATTGTCGATTGTATCAGAGCTTTCCACCTCAAGTGTGATGGT 2478
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||| || |||| || ||||| || |||||||||
Sbjct 2479 CTTTCCAGTCAGTGTCTTTACAAATATTTGCATT 2512
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| || | ||| | ||| || || || | || || || || |||||||| ||||||||
Sbjct 2513 CCACCCCTCAAGCGAAGGACCAGGTGCAGTGTGGACTCCTTCTGAATGTTATAATCTGCC 2572
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || | | || ||||||||||| || ||| |||| | || |||||||| || ||
Sbjct 2573 AACGTTCTGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCAGGGGGG 2632
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|||||||| || ||||| ||||| ||||||| || |||||||| | || |||
Sbjct 2633 ATTCCTTCCTTGTCTTGGATTTTCGCCTTTACATTGTCAACTGTATCGGAGCTCTCAACT 2692
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| | || | |||||| ||||| | || || || || |||||||||
Sbjct 2693 TCAAGGGTGATGGTCTTTCCGGTGAGTGTCTTAACAAATATTTGCATT 2740
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| || | ||| | ||| || || || | || || ||||| |||||||| ||||||||
Sbjct 2741 CCACCTCTCAAACGAAGGACGAGGTGGAGTGTGGACTCTTTCTGAATGTTATAATCTGCC 2800
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || | | || ||||||||||| || ||| |||| | || |||||||| || ||
Sbjct 2801 AAAGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCAGGGGGG 2860
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| ||||| || ||||| ||||| ||| ||| || | |||||| ||||||
Sbjct 2861 ATACCTTCCTTGTCTTGGATTTTCGCCTTAACATTGTCAATGGTATCAGAACTTTCCACT 2920
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | |||| ||||| || || | ||||| || || || |||||
Sbjct 2921 TCAAGGGTTATAGTCTTCCCAGTAAGGGTTTTAACAAAGATCTGCAT 2967
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || || || || |||||||||||||| || | || || | || || | ||||
Sbjct 1853 TGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTCCGACCATCCTCCAACTGC 1912
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| || ||| | ||||||| |||||| || ||||| || ||||| || || || ||||||
Sbjct 1913 TTCCCTGCAAAGATGAGCCTCTGCTGATCTGGAGGGATCCCTTCCTTGTCCTGAATTTTT 1972
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| ||| || | || || | ||||| |||| || | ||||| || |||
Sbjct 1973 GCCTTCACATTATCTATGGTGTCTGAGCTCTCCACCTCTAGTGTAATCGTCTTTCCTGTC 2032
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
| || || || || || |||||
Sbjct 2033 AGGGTCTTCACAAATATCTGCAT 2055
>seq127437
Length=6100
Score = 120 bits (132), Expect = 3e-22
Identities = 155/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || |||| || ||||| ||||| ||||||||||| || | ||| | | ||
Sbjct 2028 AAGAACAAGGTGAAGGGTGGATTCCTTTTGTATGTTGTAATCAGCCAGGGTCCTTCCATC 2087
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|||||||| || || ||| | ||||||| |||||| || || || || || || || ||
Sbjct 2088 CTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTC 2147
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| || || ||| ||| || | ||| ||| | ||||| || | ||| | |||
Sbjct 2148 TTGGATCTTCGCCTTCACATTGTCGATTGTGTCAGAGCTCTCCACCTCAAGAGTGATGGT 2207
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||| ||||||| || ||||| || |||||||||
Sbjct 2208 CTTCCCGGTCAGCGTCTTTACAAATATTTGCATT 2241
Score = 118 bits (130), Expect = 1e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || | ||||| || || ||||| ||||||||||||||||| | ||| || | ||
Sbjct 2257 AGAACCAAATGAAGGGTGGACTCTTTCTGAATGTTGTAATCTGCCAAGGTCCGACCATCC 2316
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||| || || ||| | ||||||| ||||||||| || || ||||| || || |||
Sbjct 2317 TCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCT 2376
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| |||||| ||||||| || | || ||| || ||||| | || | |||
Sbjct 2377 TGGATTTTTGCCTTTACATTGTCAATCGTGTCAGAACTCTCTACTTCAAGGGTGATGGTT 2436
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| || || | || || || || |||||||||
Sbjct 2437 TTTCCAGTGAGTGTCTTAACAAAGATTTGCATT 2469
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || ||||| |||||||| ||||| || | || | | || ||||||||||| ||
Sbjct 2500 GTGGACTCTTTCTGAATGTTATAATCGGCCAAAGTCCTGCCATCCTCAAGCTGCTTTCCA 2559
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| |||| | || ||||| || || || |||||||| || ||||| ||||| ||||
Sbjct 2560 GCAAAAATCAACCTTTGCTGATCAGGGGGGATTCCTTCCTTGTCTTGGATTTTCGCCTTT 2619
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | |||||| | || ||||| | || | |||||| || || | ||
Sbjct 2620 ACATTGTCAATCGTATCAGAGCTCTCAACTTCAAGGGTGATGGTCTTTCCAGTGAGTGTC 2679
Query 64427 TTTACGAAAATTTGCATT 64444
|| || || |||||||||
Sbjct 2680 TTAACAAATATTTGCATT 2697
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| || | ||| | ||| || || || | || || ||||| |||||||| ||||| ||
Sbjct 2698 CCACCTCTCAAACGAAGGACCAGGTGGAGTGTGGACTCTTTCTGAATGTTATAATCGGCC 2757
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || | | || ||||||||||| || ||| |||| | || |||||||| || ||
Sbjct 2758 AAAGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCAGGGGGG 2817
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| || || || ||||| ||||| ||| ||| || | |||||| ||||||
Sbjct 2818 ATACCCTCCTTGTCTTGGATTTTCGCCTTAACATTGTCAATGGTATCAGAACTTTCCACT 2877
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | |||| ||||| || || | || || || || || |||||
Sbjct 2878 TCAAGGGTTATAGTCTTCCCAGTAAGGGTCTTAACAAAGATCTGCAT 2924
>seq45179
Length=1454
Score = 120 bits (132), Expect = 3e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | |||||| | || | || || ||||| |||||||||||||| ||
Sbjct 329 ACCACCACGCAGACGAAGCACCAAGTGGAGGGTTGACTCTTTCTGAATGTTGTAATCCGC 388
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| || || ||||||| |||||||| || || |||| |||| ||||||||| || ||
Sbjct 389 GAGAGTTCGGCCGTCTTCCAGCTGCTTACCTGCGAAAATCAGCCTCTGCTGGTCCGGTGG 448
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394
||| || || || || || | | || ||||| || || | || || | || |
Sbjct 449 AATGCCCTCCTTATCCTGGA-TCTTAGCTTTCACGTTGTCGATGGTGTCGGAGCTTTCGA 507
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
| |||| ||| | ||||| ||||||| |||||| || ||||| ||||||
Sbjct 508 CCTCTAGAGTAATTGTCTTTCCGGTCAGAGTTTTAACAAAAATCTGCATT 557
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| ||||| | | |||||||| || | || || || || || |||||||| || ||
Sbjct 1014 CCACCGCGGAGACGAAGCACTAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 1073
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || || ||||||||||||| || ||||| | || |||| |||||| || || ||
Sbjct 1074 AGTGTTCGACCGTCTTCAAGCTGTTTCCCGGCGAATATCAGCCTCTGCTGATCCGGTGGG 1133
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| || ||||| ||||| || || ||| ||| || | || || | || ||
Sbjct 1134 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCGATCGTGTCGGAGCTCTCAACC 1193
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| |||| |||||| ||||| | |||||| || || || |||||
Sbjct 1194 TCTAGGGTTATGGTCTTTCCGGTAAGAGTTTTAACAAAGATCTGCAT 1240
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| ||||| || || ||||| || |||| ||| || | |||||||||||||| |||
Sbjct 588 GTCGACTCTTTCTGGATATTGTAGTCAGCGAGGGTTCGGCCATCTTCAAGCTGCTTACCG 647
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || |||| ||||||||| || ||||| || || || || || || || |||
Sbjct 648 GCGAAGATCAGCCTCTGCTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTC 707
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | || || | || || || | || | |||||| ||||| | |||
Sbjct 708 ACGTTGTCAATGGTGTCGGAGCTTTCGACCTCCAGGGTGATGGTCTTTCCGGTGAGGGTT 767
Query 64427 TTTACGAAAATTTGCAT 64443
|| || ||||| |||||
Sbjct 768 TTCACAAAAATCTGCAT 784
>seq73220
Length=12354
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | || ||| || ||||||| || ||||| || ||||| |||||||||||
Sbjct 6460 ACCACCACGGAGTCGAAGAACAAGATGAAGTGTAGATTCCTTCTGAATATTGTAATCTGC 6519
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| ||| | || || |||||||| || ||| | ||||||| |||||| || |||||
Sbjct 6520 CAAGGTCCGCCCATCCTCTAGCTGCTTTCCAGCAAATATGAGCCTCTGCTGATCTGGAGG 6579
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || ||||| || ||| ||| ||| || | || ||| | |||||
Sbjct 6580 GATACCCTCCTTGTCTTGAATCTTTGCCTTCACATTATCTATGGTGTCAGAGCTCTCCAC 6639
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | || || || |||| || || || ||||| |||||
Sbjct 6640 CTCAAGTGTGATCGTTTTACCTGTCAGGGTCTTCACAAAAATCTGCAT 6687
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| || | ||| | ||| || || || | || || |||||||||||||| ||||| ||
Sbjct 7829 CCTCCTCTCAAACGAAGTACAAGGTGTAGGGTGGACTCTTTTTGAATGTTATAATCGGCC 7888
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || | | || || |||||||| || ||| |||| | || |||||||| || ||
Sbjct 7889 AAAGTCCTACCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCAGGGGGG 7948
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| || || || ||||| |||||| ||| ||| || | |||||| || |||
Sbjct 7949 ATACCCTCCTTGTCTTGGATTTTTGCCTTAACATTGTCAATGGTATCAGAACTCTCAACT 8008
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | ||||| ||| || || || | || || || || || |||||
Sbjct 8009 TCAAGAGTTATGGTTTTTCCAGTAAGGGTCTTAACAAAGATCTGCAT 8055
>seq9834
Length=2319
Score = 109 bits (120), Expect = 5e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||||| | |||||| | || | || || || || |||||||||||||| ||
Sbjct 282 ACCACCGCGCAGACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGC 223
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || ||| | || ||||||||||||||||| |||| || | ||||||||| || ||
Sbjct 222 AAGAGTTCGCCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGTCTCTGCTGGTCTGGTGG 163
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394
||| ||||| || || || | | || ||||| || || | || || | || |
Sbjct 162 AATCCCTTCCTTGTCCTG-AATCTTCGCTTTCACGTTGTCAATGGTGTCGGAGCTTTCGA 104
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| || | || | |||||| ||||| | ||||| || ||||| |||||
Sbjct 103 CCTCCAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAAATCTGCAT 55
>seq121659
Length=2328
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || ||||| || ||||||||||| || | ||| ||| | |||
Sbjct 334 AGGACCAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCGGCAAGGGTTCGCCCATCT 393
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||||||| | || |||| ||||||||| || ||||| || || || ||
Sbjct 394 TCGAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCC 453
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | | || ||||| || || | || || | || ||||| | ||| | |||
Sbjct 454 TGGA-TCTTGGCTTTAACGTTGTCGATCGTGTCGGAGCTTTCGACTTCCAAAGTAATGGT 512
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| || || | ||| || || || || |||||
Sbjct 513 CTTTCCTGTAAGAGTCTTCACAAATATCTGCAT 545
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| ||||| | | |||||||| || | || || || || || |||||||| || ||
Sbjct 547 CCACCGCGGAGACGAAGCACTAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 606
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || || |||||||||||||||| ||||| | || |||| |||||| || || ||
Sbjct 607 AGTGTTCGACCGTCTTCAAGCTGCTTCCCGGCGAATATCAGCCTCTGCTGATCCGGTGGG 666
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| || ||||| ||||| || || ||| ||| || | || || | || ||
Sbjct 667 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCGATCGTGTCCGAGCTCTCAACC 726
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| |||| ||||| ||||| | ||||| || || || |||||
Sbjct 727 TCTAGGGTTATTGTCTTTCCGGTAAGGGTTTTGACAAAGATCTGCAT 773
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || ||||||||||||||||| || |||| ||| || | ||||| |||||||| ||
Sbjct 121 GTTGACTCTTTTTGAATGTTGTAGTCGGCGAGGGTTCGGCCATCTTCCAGCTGCTTACCA 180
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || |||| ||||||||| || ||||| || || || || || || || |||
Sbjct 181 GCGAAGATCAGCCTCTGCTGGTCTGGTGGAATGCCCTCCTTATCCTGGATCTTAGCCTTC 240
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | || || | || || || | || | |||||| ||||| | |||
Sbjct 241 ACGTTGTCAATGGTGTCGGAGCTTTCGACCTCCAGGGTGATGGTCTTCCCGGTAAGGGTT 300
Query 64427 TTTACGAAAATTTGCAT 64443
|| || ||||| |||||
Sbjct 301 TTCACAAAAATCTGCAT 317
>seq83787
Length=2295
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || ||||| || || |||||||| || | ||| ||| | |||
Sbjct 2119 AGGACCAGGTGAAGAGTTGACTCTTTCTGGATATTGTAATCGGCAAGGGTTCGCCCATCT 2060
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||||||| | || |||| ||||||||| || ||||| || || || ||
Sbjct 2059 TCGAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCC 2000
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | | || ||||| || || | || || | || ||||| | ||| | |||
Sbjct 1999 TGGA-TCTTGGCTTTAACGTTGTCGATCGTGTCGGAGCTTTCGACTTCCAAAGTAATGGT 1941
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| || || | |||||| || || || |||||
Sbjct 1940 CTTTCCTGTAAGAGTTTTCACAAATATCTGCAT 1908
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| ||||| | | |||||||| || | || || || || || |||||||| || ||
Sbjct 1906 CCACCGCGGAGACGAAGCACTAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 1847
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || || |||||||||||||||| ||||| | || |||| |||||| || || ||
Sbjct 1846 AGAGTTCGACCGTCTTCAAGCTGCTTCCCGGCGAATATCAGCCTCTGCTGATCCGGTGGG 1787
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| || ||||| ||||| || || ||| ||| || | || || | || ||
Sbjct 1786 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCGATCGTGTCCGAGCTCTCAACC 1727
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| |||| ||||| ||||| | ||||| || || || |||||
Sbjct 1726 TCTAGGGTTATTGTCTTTCCGGTAAGGGTTTTCACAAAGATCTGCAT 1680
>seq138849
Length=4585
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
|||||| || || | || || || || || || ||||| || || | ||| || ||||
Sbjct 1443 AAGCACCAGGTGGAGGGTTGACTCCTTCTGGATATTGTAGTCGGCTAGGGTTCGGCCGTC 1384
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|| ||||| ||||| || | ||||| ||||||||||| || || || ||||| || ||
Sbjct 1383 CTCCAGCTGTTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTC 1324
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| || || ||| ||| || | || ||| | || || |||| |||| ||
Sbjct 1323 TTGGATCTTGGCCTTGACATTATCGATCGTGTCAGATGATTCAACCTCTAGGGTTATCGT 1264
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
||| || || | || || |||||||| ||||| ||
Sbjct 1263 CTTCCCCGTTAGGGTCTTCACGAAAATCTGCATCTT 1228
>seq76175
Length=8586
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | ||||| || || || |||||||| || || | ||| || ||||
Sbjct 2468 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCC 2409
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||| || || || | || || ||||||||||| || || || ||||| || ||
Sbjct 2408 TCCAGCTGTTTTCCAGCGAAGATAAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCC 2349
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | || ||| | || || |||| |||| ||||
Sbjct 2348 TGGATCTTAGCCTTGACATTGTCGATGGTGTCAGACGATTCAACCTCTAGGGTTATGGTC 2289
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| || || | ||||| ||||| || ||||| ||
Sbjct 2288 TTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 2254
>seq56209
Length=7549
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || || || || || || ||||| || || | ||| || ||||
Sbjct 2959 AGCACCAGGTGGAGGGTTGACTCCTTCTGGATATTGTAGTCGGCTAGGGTTCGGCCGTCC 2900
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||| ||||| || | ||||| ||||||||||| || || || ||||| || |||
Sbjct 2899 TCCAGCTGTTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCT 2840
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | || ||| | || || |||| |||| |||
Sbjct 2839 TGGATCTTGGCCTTGACATTATCGATCGTGTCAGATGATTCAACCTCTAGGGTTATCGTC 2780
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| || || | || || |||||||| ||||| ||
Sbjct 2779 TTCCCCGTTAGGGTCTTCACGAAAATCTGCATCTT 2745
>seq2835
Length=4848
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | ||||| || || || |||||||| || || | ||| || ||||
Sbjct 795 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCC 736
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||| || || || | ||||| ||||||||||| || || || ||||| || ||
Sbjct 735 TCCAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCC 676
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | || ||| | || || |||| |||| ||||
Sbjct 675 TGGATCTTAGCCTTGACATTGTCGATGGTGTCAGATGATTCAACCTCTAGGGTTATGGTC 616
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| || || | ||||| || || || ||||| ||
Sbjct 615 TTCCCCGTTAGGGTTTTCACAAAGATCTGCATCTT 581
>seq195588
Length=1886
Score = 89.7 bits (98), Expect = 5e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | || ||| || ||||||| || ||||| || ||||| |||||||||||
Sbjct 114 ACCACCACGGAGTCGAAGAACAAGATGAAGTGTAGATTCCTTCTGAATATTGTAATCTGC 55
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTC 64329
| ||| ||| | || || |||||||| || ||| | ||||||| |||||| ||
Sbjct 54 CAAGGTCCGCCCATCCTCTAGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGATC 1
>seq119444
Length=2962
Score = 89.7 bits (98), Expect = 5e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | || ||| || ||||||| || ||||| || ||||| |||||||||||
Sbjct 114 ACCACCACGGAGTCGAAGAACAAGATGAAGTGTAGATTCCTTCTGAATATTGTAATCTGC 55
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTC 64329
| ||| ||| | || || |||||||| || ||| | ||||||| |||||| ||
Sbjct 54 CAAGGTCCGCCCATCCTCTAGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGATC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 498330459371360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |